Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1303
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068496-1|AAH68496.1| 854|Homo sapiens MGC16169 protein protein. 57 6e-08
BC020853-1|AAH20853.2| 286|Homo sapiens MGC16169 protein protein. 57 6e-08
BC009208-1|AAH09208.2| 830|Homo sapiens hypothetical protein MG... 57 6e-08
AK098157-1|BAC05244.1| 636|Homo sapiens protein ( Homo sapiens ... 57 6e-08
AK074305-1|BAB85045.1| 893|Homo sapiens protein ( Homo sapiens ... 57 6e-08
AC107381-1|AAY40979.1| 170|Homo sapiens unknown protein. 36 0.15
>BC068496-1|AAH68496.1| 854|Homo sapiens MGC16169 protein protein.
Length = 854
Score = 56.8 bits (131), Expect = 6e-08
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Frame = +3
Query: 6 IPMEVLFVEICPRISLSDFFSLICE------------------DKCCVVDIRSNLLYEKS 131
IP+ L E+ PRIS D L CE K VVDIR++ + +
Sbjct: 711 IPLNDLKSEVSPRISAEDLIDL-CELTVTGHFKTPSKKTKSSKPKLLVVDIRNSEDFIRG 769
Query: 132 CIDGSVNVPYSGVHLGRHELRALGPQPERALQQAIKMKRNVVIASAEDETAQLFSDYLVK 311
I GS+N+P+S EL P A+ Q K K V++ TA+ F+ +LVK
Sbjct: 770 HISGSINIPFSAAFTAEGELT---QGPYTAMLQNFKGKVIVIVGHVAKHTAE-FAAHLVK 825
Query: 312 CGVPRVCILHGGIAALQTHIPSLFITPPT 398
PR+CIL GGI ++ P+ +T P+
Sbjct: 826 MKYPRICILDGGINKIK---PTGLLTIPS 851
>BC020853-1|AAH20853.2| 286|Homo sapiens MGC16169 protein protein.
Length = 286
Score = 56.8 bits (131), Expect = 6e-08
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Frame = +3
Query: 6 IPMEVLFVEICPRISLSDFFSLICE------------------DKCCVVDIRSNLLYEKS 131
IP+ L E+ PRIS D L CE K VVDIR++ + +
Sbjct: 143 IPLNDLKSEVSPRISAEDLIDL-CELTVTGHFKTPSKKTKSSKPKLLVVDIRNSEDFIRG 201
Query: 132 CIDGSVNVPYSGVHLGRHELRALGPQPERALQQAIKMKRNVVIASAEDETAQLFSDYLVK 311
I GS+N+P+S EL P A+ Q K K V++ TA+ F+ +LVK
Sbjct: 202 HISGSINIPFSAAFTAEGELT---QGPYTAMLQNFKGKVIVIVGHVAKHTAE-FAAHLVK 257
Query: 312 CGVPRVCILHGGIAALQTHIPSLFITPPT 398
PR+CIL GGI ++ P+ +T P+
Sbjct: 258 MKYPRICILDGGINKIK---PTGLLTIPS 283
>BC009208-1|AAH09208.2| 830|Homo sapiens hypothetical protein
MGC16169 protein.
Length = 830
Score = 56.8 bits (131), Expect = 6e-08
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Frame = +3
Query: 6 IPMEVLFVEICPRISLSDFFSLICE------------------DKCCVVDIRSNLLYEKS 131
IP+ L E+ PRIS D L CE K VVDIR++ + +
Sbjct: 687 IPLNDLKSEVSPRISAEDLIDL-CELTVTGHFKTPSKKTKSSKPKLLVVDIRNSEDFIRG 745
Query: 132 CIDGSVNVPYSGVHLGRHELRALGPQPERALQQAIKMKRNVVIASAEDETAQLFSDYLVK 311
I GS+N+P+S EL P A+ Q K K V++ TA+ F+ +LVK
Sbjct: 746 HISGSINIPFSAAFTAEGELT---QGPYTAMLQNFKGKVIVIVGHVAKHTAE-FAAHLVK 801
Query: 312 CGVPRVCILHGGIAALQTHIPSLFITPPT 398
PR+CIL GGI ++ P+ +T P+
Sbjct: 802 MKYPRICILDGGINKIK---PTGLLTIPS 827
>AK098157-1|BAC05244.1| 636|Homo sapiens protein ( Homo sapiens
cDNA FLJ40838 fis, clone TRACH2013552. ).
Length = 636
Score = 56.8 bits (131), Expect = 6e-08
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Frame = +3
Query: 6 IPMEVLFVEICPRISLSDFFSLICE------------------DKCCVVDIRSNLLYEKS 131
IP+ L E+ PRIS D L CE K VVDIR++ + +
Sbjct: 493 IPLNDLKSEVSPRISAEDLIDL-CELTVTGHFKTPSKKTKSSKPKLLVVDIRNSEDFIRG 551
Query: 132 CIDGSVNVPYSGVHLGRHELRALGPQPERALQQAIKMKRNVVIASAEDETAQLFSDYLVK 311
I GS+N+P+S EL P A+ Q K K V++ TA+ F+ +LVK
Sbjct: 552 HISGSINIPFSAAFTAEGELT---QGPYTAMLQNFKGKVIVIVGHVAKHTAE-FAAHLVK 607
Query: 312 CGVPRVCILHGGIAALQTHIPSLFITPPT 398
PR+CIL GGI ++ P+ +T P+
Sbjct: 608 MKYPRICILDGGINKIK---PTGLLTIPS 633
>AK074305-1|BAB85045.1| 893|Homo sapiens protein ( Homo sapiens cDNA
FLJ23725 fis, clone HEP14024. ).
Length = 893
Score = 56.8 bits (131), Expect = 6e-08
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Frame = +3
Query: 6 IPMEVLFVEICPRISLSDFFSLICE------------------DKCCVVDIRSNLLYEKS 131
IP+ L E+ PRIS D L CE K VVDIR++ + +
Sbjct: 750 IPLNDLKSEVSPRISAEDLIDL-CELTVTGHFKTPSKKTKSSKPKLLVVDIRNSEDFIRG 808
Query: 132 CIDGSVNVPYSGVHLGRHELRALGPQPERALQQAIKMKRNVVIASAEDETAQLFSDYLVK 311
I GS+N+P+S EL P A+ Q K K V++ TA+ F+ +LVK
Sbjct: 809 HISGSINIPFSAAFTAEGELT---QGPYTAMLQNFKGKVIVIVGHVAKHTAE-FAAHLVK 864
Query: 312 CGVPRVCILHGGIAALQTHIPSLFITPPT 398
PR+CIL GGI ++ P+ +T P+
Sbjct: 865 MKYPRICILDGGINKIK---PTGLLTIPS 890
>AC107381-1|AAY40979.1| 170|Homo sapiens unknown protein.
Length = 170
Score = 35.5 bits (78), Expect = 0.15
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
Frame = +3
Query: 6 IPMEVLFVEICPRISLSDFFSLICE------------------DKCCVVDIRSNLLYEKS 131
IP+ L E+ PRIS D L CE K VVDIR++ + +
Sbjct: 63 IPLNDLKSEVSPRISAEDLIDL-CELTVTGHFKTPSKKTKSSKPKLLVVDIRNSEDFIRG 121
Query: 132 CIDGSVNVPYSGVHLGRHELRALGPQPERALQQAIKMKRNVVIASAEDETAQ 287
I GS+N+P+S EL P A+ Q K K V++ TA+
Sbjct: 122 HISGSINIPFSAAFTAEGELT---QGPYTAMLQNFKGKVIVIVGHVAKHTAE 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,371,443
Number of Sequences: 237096
Number of extensions: 1968565
Number of successful extensions: 4040
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4035
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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