Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1302
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 395 e-110
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 395 e-110
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 395 e-110
03_01_0034 + 318432-318825,318902-319851 393 e-110
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 393 e-110
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 393 e-110
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 393 e-110
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 392 e-109
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 200 6e-52
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 198 4e-51
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 198 4e-51
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 178 3e-45
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 142 3e-34
02_01_0302 - 2021221-2023305 33 0.19
06_01_0027 - 271199-271424,271628-272095,272721-273018,273133-27... 32 0.33
07_01_0834 - 6779017-6779319 31 1.0
02_05_0933 + 32846658-32846729,32847038-32847133,32847243-328474... 29 3.1
10_08_0068 + 14624376-14624975,14625113-14625601 29 4.1
12_01_0440 - 3478361-3479152,3479163-3479681 28 5.4
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 28 7.1
08_01_0343 - 3025577-3025810,3026428-3026505,3026630-3026748,302... 28 7.1
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 27 9.4
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 395 bits (973), Expect = e-110
Identities = 181/211 (85%), Positives = 198/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TPT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLN+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 357
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 395 bits (973), Expect = e-110
Identities = 181/211 (85%), Positives = 198/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TPT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLN+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 357
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 395 bits (973), Expect = e-110
Identities = 181/211 (85%), Positives = 198/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TPT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLN+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 357
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 393 bits (968), Expect = e-110
Identities = 180/211 (85%), Positives = 197/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLN+QNKNSSYFVEWIPNNVK+ VCDIP
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 393 bits (967), Expect = e-110
Identities = 179/211 (84%), Positives = 198/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 327 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 386
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 387 LYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 446
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 447 MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 506
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQM+N+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 507 DEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 537
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 393 bits (967), Expect = e-110
Identities = 179/211 (84%), Positives = 198/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 168 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 227
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 228 LYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 287
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 288 MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 347
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQM+N+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 348 DEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 378
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 393 bits (967), Expect = e-110
Identities = 179/211 (84%), Positives = 198/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQM+N+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 327 DEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 392 bits (965), Expect = e-109
Identities = 179/211 (84%), Positives = 197/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 163 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 222
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+ P++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 223 LYDICFRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 282
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEV
Sbjct: 283 MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEV 342
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQM+N+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 343 DEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 373
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 200 bits (489), Expect = 6e-52
Identities = 85/207 (41%), Positives = 134/207 (64%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEA 208
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF
Sbjct: 209 IYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFM 268
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
+ +AP+ S + L+VPE+T +F+ +MMA CDPRHG+Y+ ++RG + K+V
Sbjct: 269 LSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDV 328
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ + I+ K + FV+W P K +
Sbjct: 329 NAAVATIKTKRTVQFVDWCPTGFKCGI 355
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 198 bits (482), Expect = 4e-51
Identities = 86/207 (41%), Positives = 132/207 (63%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEA 208
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF
Sbjct: 209 IYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFM 268
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
+ +AP+ S + L+V E+T F+ +MMA CDPRHG+Y+ ++RG + K+V
Sbjct: 269 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDV 328
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ + I+ K + FV+W P K +
Sbjct: 329 NAAVATIKTKRTIQFVDWCPTGFKCGI 355
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 198 bits (482), Expect = 4e-51
Identities = 86/207 (41%), Positives = 132/207 (63%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEA 208
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF
Sbjct: 209 IYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFM 268
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
+ +AP+ S + L+V E+T F+ +MMA CDPRHG+Y+ ++RG + K+V
Sbjct: 269 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDV 328
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ + I+ K + FV+W P K +
Sbjct: 329 NAAVATIKTKRTIQFVDWCPTGFKCGI 355
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 178 bits (434), Expect = 3e-45
Identities = 75/180 (41%), Positives = 117/180 (65%)
Frame = +3
Query: 84 KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTM 263
K+S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +
Sbjct: 257 KISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVI 316
Query: 264 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQM 443
S +TT LRF G +N D+ + N+VP+PR+HF + +AP+ S + +VPE+T +
Sbjct: 317 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSV 376
Query: 444 FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 623
F+ ++MA CDPRHG+Y+ ++RG + K+V+ + +I+ + + FV+W P K +
Sbjct: 377 FEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGI 436
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 142 bits (343), Expect = 3e-34
Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 7/213 (3%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNE 179
MG+ L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN
Sbjct: 149 MGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNT 208
Query: 180 ALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHF 359
AL I L L+ PT+ N LVS MS TT LR+PG +N DL L +++P PR HF
Sbjct: 209 ALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268
Query: 360 FMPGFAPLT-SRGSRQYRALTVPELTQQMFDAKNMMAACDPRH-----GRYLTVAAIFRG 521
M G+ PLT R R TV ++ +++ KN+M + R+ +Y+++ I +G
Sbjct: 269 LMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQG 328
Query: 522 RMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTA 620
+ +V E + I+ + F+EW P +++ +
Sbjct: 329 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVS 361
>02_01_0302 - 2021221-2023305
Length = 694
Score = 33.1 bits (72), Expect = 0.19
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Frame = +1
Query: 217 PHPPTVTLTT*FPSQCLVLPLALGS--------PVS*TLISENWP*----TWFPSHVSTS 360
P PP+ + T +PS P GS P S T S + P + PS+ S +
Sbjct: 415 PQPPSSSPTPSYPSPSSSYPAPPGSNTPSYPSPPSSATTPSSHSPPGGSSSTTPSYPSPN 474
Query: 361 SCQVSLPSHPVEADSTVP*LYPSSRNRCSTPRT*WPP 471
+ S PSHP ST P YPS + +TP PP
Sbjct: 475 GGKPSTPSHPSPPGSTTP-SYPSPPSSSTTPSYHSPP 510
>06_01_0027 -
271199-271424,271628-272095,272721-273018,273133-273343,
273427-274124,274921-274969,276059-276112,276244-276275,
276319-276484,276563-276628,276717-276812,276868-276957,
277302-277398,277496-277575,277709-277753,278006-278134,
278593-278722,278888-279222,279918-280053,280149-280328,
280422-280679,280752-281137
Length = 1409
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 452 GVEHLLRELGYSQGTVLSASTGCEGSETWHEEVETWEGNHVYGQFS 315
G LR+LG L STG EG + W E+++ W Y + S
Sbjct: 306 GFSKPLRKLGKWLNEALKRSTGNEGFQIWIEKLKVWLKEQTYAENS 351
>07_01_0834 - 6779017-6779319
Length = 100
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 204 CGSRCRIEPRCRCSRFRLCFQLAGELR 124
C ++PRCRC RL GELR
Sbjct: 7 CRELAAVQPRCRCEALRLFMDGVGELR 33
>02_05_0933 +
32846658-32846729,32847038-32847133,32847243-32847411,
32847608-32847669,32848364-32849320,32850036-32850119,
32850307-32850595,32850645-32850694
Length = 592
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 350 SPLLHARFRSPHIPWKQTVPCLDCTRAHATDVRRQEHDG 466
S + R RS IP+ P ++CT A A DV E +G
Sbjct: 437 SRMRRGRPRSNFIPFLDPEPSVECTEAPAADVVNLEKEG 475
>10_08_0068 + 14624376-14624975,14625113-14625601
Length = 362
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = -1
Query: 524 AAAEDG---SDGEVAA-VARVTGGHHVLGVEHLLRELGYSQGTVLSASTGCEGSETWH 363
AAA DG S G +A VA GHHVL + G + + G TWH
Sbjct: 8 AAASDGASSSSGSASAIVAGTVNGHHVLKIVGYSFTKAVPSGKSIRSRPFRAGGHTWH 65
>12_01_0440 - 3478361-3479152,3479163-3479681
Length = 436
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 249 LSG*GHRRWVWTV*ECGSRCRIEPR 175
L G HR WVW + + C +EPR
Sbjct: 217 LEGFNHRPWVWNLLSWLTLCLVEPR 241
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 343 SHVSTSSCQVSLPSHPVEADSTVP*LYPSSRNRCSTPRT 459
SH+S C S SH D +VP S++ S PRT
Sbjct: 319 SHISCKCCSFSSVSHVAFHDLSVPLPPTQSKSIASPPRT 357
>08_01_0343 - 3025577-3025810,3026428-3026505,3026630-3026748,
3027566-3027645,3028034-3028107,3028536-3028620,
3028704-3028789,3028968-3029038,3029126-3029207,
3029490-3029531,3029552-3029584,3029699-3029794,
3030163-3030414,3030970-3031149,3032079-3032119,
3032341-3032470,3032504-3032606,3032686-3032773,
3033151-3033304,3033688-3033739,3033815-3033894,
3034478-3034789,3034886-3034955,3035033-3035100,
3035405-3035678,3036408-3036580,3037036-3037128,
3037228-3037443
Length = 1121
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 77 LAQSIRHCRRTIQCDSLSSPAS*KHRRNLLHRQRGSIRHL 196
+ + I H ++ +SLSSP++ KH+ NL + + HL
Sbjct: 987 VVRGIEHVLESLSSNSLSSPSNFKHKGNLEKQVTFTALHL 1026
>09_04_0076 +
14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/86 (26%), Positives = 36/86 (41%)
Frame = +3
Query: 120 TLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQ 299
TL +H + TD ID E + L + + +S+T+ G R P +
Sbjct: 99 TLVLHSPEKKTDHV-SIDTE----VHLALTPLEPIVFFGFHKRMSVTVVGTVEGGRPPTK 153
Query: 300 LNADLRKLAVNMVPFPRLHFFMPGFA 377
+ DL+K VN+ PRL +A
Sbjct: 154 IKTDLKKPVVNLACHPRLPVLYVAYA 179
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,259,896
Number of Sequences: 37544
Number of extensions: 411697
Number of successful extensions: 1310
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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