Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1302
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 437 e-123
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 430 e-121
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 430 e-121
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 425 e-119
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 423 e-119
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 421 e-118
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 229 1e-60
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 229 1e-60
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 189 1e-48
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 188 3e-48
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 188 3e-48
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 188 3e-48
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 188 3e-48
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 187 7e-48
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 186 9e-48
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 186 9e-48
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 185 3e-47
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 184 4e-47
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 184 4e-47
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 184 6e-47
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 180 6e-46
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 180 6e-46
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 173 7e-44
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 166 1e-41
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 101 6e-22
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 101 6e-22
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 33 0.17
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 32 0.40
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 32 0.40
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.91
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 30 1.6
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 30 1.6
Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 2.8
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 2.8
U28940-5|AAA68351.1| 156|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75529-7|CAE54888.1| 382|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z75529-6|CAA99785.1| 269|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 28 4.9
U40029-7|AAA81127.1| 645|Caenorhabditis elegans Yeast scc (mito... 28 6.4
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 6.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 27 8.5
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 437 bits (1077), Expect = e-123
Identities = 202/211 (95%), Positives = 210/211 (99%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TPTYGDLNHLVS+TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
MPGFAPLTSRGS+QYR+LTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLN+QNKNSSYFVEWIPNNVKTAVCDIP
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP 357
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 430 bits (1060), Expect = e-121
Identities = 199/211 (94%), Positives = 206/211 (97%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
MPGFAPLTSR ++QYRA+TVPELTQQ FDAKNMMAACDPRHGRYLT AAIFRGRMSMKEV
Sbjct: 267 MPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLNIQNKNSSYFV+WIPNNVKTAVCDIP
Sbjct: 327 DEQMLNIQNKNSSYFVDWIPNNVKTAVCDIP 357
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 430 bits (1060), Expect = e-121
Identities = 199/211 (94%), Positives = 206/211 (97%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
MPGFAPLTSR ++QYRA+TVPELTQQ FDAKNMMAACDPRHGRYLT AAIFRGRMSMKEV
Sbjct: 267 MPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLNIQNKNSSYFV+WIPNNVKTAVCDIP
Sbjct: 327 DEQMLNIQNKNSSYFVDWIPNNVKTAVCDIP 357
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 425 bits (1047), Expect = e-119
Identities = 195/211 (92%), Positives = 208/211 (98%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDIC+RTLKL+ PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
MPGFAPL+++G++ YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EV
Sbjct: 267 MPGFAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLN+QNKNSSYFVEWIPNNVKTAVCDIP
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP 357
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 423 bits (1041), Expect = e-119
Identities = 193/211 (91%), Positives = 208/211 (98%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKLS PTYGDLNHLVS+TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLSNPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
MPGFAPL+++G++ YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EV
Sbjct: 267 MPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
D+QM+N+QNKNSSYFVEWIPNNVKTAVCDIP
Sbjct: 327 DDQMMNVQNKNSSYFVEWIPNNVKTAVCDIP 357
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 421 bits (1038), Expect = e-118
Identities = 193/211 (91%), Positives = 208/211 (98%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREE+PDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA
Sbjct: 147 MGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDIC+RTLKL+ PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
MPGFAPL+++G++ YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EV
Sbjct: 267 MPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQML++QNKNSSYFVEWIPNNVKTAVCDIP
Sbjct: 327 DEQMLSVQNKNSSYFVEWIPNNVKTAVCDIP 357
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 229 bits (560), Expect = 1e-60
Identities = 109/212 (51%), Positives = 153/212 (72%), Gaps = 1/212 (0%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LLISK+REEY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N DE +CIDNEA
Sbjct: 147 LGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEA 206
Query: 183 LYDICFRTLKL-STPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHF 359
++DIC LKL + TYGDLNHL SL +SG+TT RF G L D+RKL N PRLHF
Sbjct: 207 IFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHF 264
Query: 360 FMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKE 539
FM FAP+ +G +A ++ +LTQQ+ DAKN+M C+ G++L+ A I+RG+ + K+
Sbjct: 265 FMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKK 323
Query: 540 VDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
EQ+++++N++ S +E +P + T VCDIP
Sbjct: 324 DAEQIISVENEDPSEMIESLPKSTNTDVCDIP 355
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 229 bits (560), Expect = 1e-60
Identities = 109/212 (51%), Positives = 153/212 (72%), Gaps = 1/212 (0%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LLISK+REEY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N DE +CIDNEA
Sbjct: 147 LGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEA 206
Query: 183 LYDICFRTLKL-STPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHF 359
++DIC LKL + TYGDLNHL SL +SG+TT RF G L D+RKL N PRLHF
Sbjct: 207 IFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHF 264
Query: 360 FMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKE 539
FM FAP+ +G +A ++ +LTQQ+ DAKN+M C+ G++L+ A I+RG+ + K+
Sbjct: 265 FMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKK 323
Query: 540 VDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
EQ+++++N++ S +E +P + T VCDIP
Sbjct: 324 DAEQIISVENEDPSEMIESLPKSTNTDVCDIP 355
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 189 bits (461), Expect = 1e-48
Identities = 81/205 (39%), Positives = 133/205 (64%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
++L+ ++ EY + +S+ P+P++S +VVEPYN+ L+ H +E++D ++ +DNEA+Y
Sbjct: 148 SMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIY 207
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L++S PTY +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 208 DICRRNLRVSRPTYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLV 267
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+ PL S S + L+V E+T+ F+A N M CDP+HG+Y+ V ++RG + K+V
Sbjct: 268 AYNPLIS--SAHHEFLSVDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSA 325
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ +I+ + S FV+W P K +
Sbjct: 326 AIKSIKTQRSVQFVDWCPTGFKVGL 350
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 188 bits (458), Expect = 3e-48
Identities = 81/205 (39%), Positives = 127/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+Y
Sbjct: 151 SLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIY 210
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 211 DICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLA 270
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+
Sbjct: 271 TFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNA 330
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K S FV+W P K +
Sbjct: 331 AIATIKTKRSIQFVDWCPTGFKVGI 355
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 188 bits (458), Expect = 3e-48
Identities = 81/205 (39%), Positives = 127/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+Y
Sbjct: 150 SLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIY 209
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 210 DICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLA 269
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+
Sbjct: 270 TFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNA 329
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K S FV+W P K +
Sbjct: 330 AIATIKTKRSIQFVDWCPTGFKVGI 354
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 188 bits (458), Expect = 3e-48
Identities = 81/205 (39%), Positives = 127/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+Y
Sbjct: 151 SLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIY 210
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 211 DICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLA 270
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+
Sbjct: 271 TFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNA 330
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K S FV+W P K +
Sbjct: 331 AIATIKTKRSIQFVDWCPTGFKVGI 355
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 188 bits (458), Expect = 3e-48
Identities = 81/205 (39%), Positives = 127/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+Y
Sbjct: 151 SLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIY 210
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 211 DICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLA 270
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+
Sbjct: 271 TFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNA 330
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K S FV+W P K +
Sbjct: 331 AIATIKTKRSIQFVDWCPTGFKVGI 355
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 187 bits (455), Expect = 7e-48
Identities = 79/205 (38%), Positives = 127/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+Y
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIY 208
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 209 DICRRNLSVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLA 268
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+ PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+
Sbjct: 269 AYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNT 328
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K + FV+W P K +
Sbjct: 329 AIAAIKTKRTIQFVDWCPTGFKVGI 353
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 186 bits (454), Expect = 9e-48
Identities = 79/205 (38%), Positives = 127/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+Y
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIY 208
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 209 DICRRNLDVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLA 268
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+ PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+
Sbjct: 269 AYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNT 328
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K + FV+W P K +
Sbjct: 329 AIAAIKTKRTIQFVDWCPTGFKVGI 353
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 186 bits (454), Expect = 9e-48
Identities = 79/205 (38%), Positives = 127/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+Y
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIY 208
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 209 DICRRNLDVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLA 268
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+ PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+
Sbjct: 269 AYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNT 328
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K + FV+W P K +
Sbjct: 329 AIAAIKTKRTIQFVDWCPTGFKVGI 353
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 185 bits (450), Expect = 3e-47
Identities = 78/205 (38%), Positives = 126/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ +Y + +S+ P+P+V VVEPYN+ L+ H +E++D + +DNEA+Y
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIY 208
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 209 DICRRNLSVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLA 268
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+ PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+
Sbjct: 269 AYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNT 328
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K + FV+W P K +
Sbjct: 329 AIAAIKTKRTIQFVDWCPTGFKVGI 353
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 184 bits (449), Expect = 4e-47
Identities = 79/205 (38%), Positives = 127/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+Y
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIY 208
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 209 DICKRNLDVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLA 268
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+ PL S + AL+V ++T F+ N M CDPR+G+Y+ V ++RG + K+V+
Sbjct: 269 SYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNT 328
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K S FV+W P K +
Sbjct: 329 AITAIKTKRSVQFVDWCPTGFKVGI 353
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 184 bits (449), Expect = 4e-47
Identities = 79/205 (38%), Positives = 127/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+Y
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIY 208
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 209 DICKRNLDVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLA 268
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+ PL S + AL+V ++T F+ N M CDPR+G+Y+ V ++RG + K+V+
Sbjct: 269 SYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNT 328
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K S FV+W P K +
Sbjct: 329 AITAIKTKRSVQFVDWCPTGFKVGI 353
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 184 bits (447), Expect = 6e-47
Identities = 79/204 (38%), Positives = 128/204 (62%)
Frame = +3
Query: 12 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD 191
LL+ ++ +Y + + + P+P+VS ++VEPYN+ L+ H +E++D ++ +DNEA+YD
Sbjct: 157 LLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYD 216
Query: 192 ICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 371
IC R L L+ PTY +LN L++ +S VT LRF G LN DL + N+VP+PR+HF +
Sbjct: 217 ICRRNLDLARPTYTNLNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTT 276
Query: 372 FAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQ 551
+AP+ S + +TV E+TQQ F+ M CDPR G+Y+ ++RG + K+V+
Sbjct: 277 YAPIISAEKAYHEQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAA 336
Query: 552 MLNIQNKNSSYFVEWIPNNVKTAV 623
+ +++ K S FV+W P K +
Sbjct: 337 IASVKTKRSIQFVDWCPTGFKVGI 360
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 180 bits (439), Expect = 6e-46
Identities = 79/205 (38%), Positives = 126/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ EY + +++ P+P+VS ++VEPYN+ L H +E++D T+ +DNEA+Y
Sbjct: 157 SLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIY 216
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L L+ PTY +LN LV+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 217 DICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLV 276
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+APL S + TV ++T F+ M CDPR G+Y+ V ++RG + K+++
Sbjct: 277 TYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINS 336
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ ++ K + FVEW P K +
Sbjct: 337 AIAAVKTKRTVQFVEWCPTGFKVGI 361
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 180 bits (439), Expect = 6e-46
Identities = 79/205 (38%), Positives = 126/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ EY + +++ P+P+VS ++VEPYN+ L H +E++D T+ +DNEA+Y
Sbjct: 129 SLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIY 188
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
DIC R L L+ PTY +LN LV+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 189 DICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLV 248
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+APL S + TV ++T F+ M CDPR G+Y+ V ++RG + K+++
Sbjct: 249 TYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINS 308
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ ++ K + FVEW P K +
Sbjct: 309 AIAAVKTKRTVQFVEWCPTGFKVGI 333
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 173 bits (422), Expect = 7e-44
Identities = 74/205 (36%), Positives = 126/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+LL+ ++ E+ + +SV P+P+VS +VVEPYN+ L+ H +E +D ++ +DNEA+Y
Sbjct: 154 SLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIY 213
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
D+C + L + P+Y +LN L++ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 214 DLCRQKLHVERPSYSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLA 273
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+AP+ S + L+V ++T F+ N M CDP G+Y+ V ++RG + K+V+
Sbjct: 274 TYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNA 333
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ +++ K FV+W P K +
Sbjct: 334 AISSVKAKRGINFVDWCPTGFKVGI 358
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 166 bits (404), Expect = 1e-41
Identities = 71/205 (34%), Positives = 126/205 (61%)
Frame = +3
Query: 9 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 188
+L++ ++ +Y + +S+ P+P++S ++VEPYN+ L+ H +E++D ++ +DNEA+Y
Sbjct: 151 SLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIY 210
Query: 189 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 368
+I L + +PTY LN L++ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 211 EITKVNLGVRSPTYTHLNRLLAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLV 270
Query: 369 GFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 548
+AP+ S + L+V E+T F+ + M CDPR+G+Y+ ++RG + KE++
Sbjct: 271 TYAPIISAEKAYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINS 330
Query: 549 QMLNIQNKNSSYFVEWIPNNVKTAV 623
+ I+ K + FV+W P K +
Sbjct: 331 AISTIKTKRAIQFVDWCPTGFKVGI 355
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 101 bits (241), Expect = 6e-22
Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = +3
Query: 6 GTLLISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDNEA 182
G+LL+ ++RE +P +++ TYSV + S D VV PYN LS+ +L+EN D +DN A
Sbjct: 152 GSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAA 211
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
L+ + K TPT+ +N LV+ MS T RF + +R L ++ PFP +HF
Sbjct: 212 LHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFI 269
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPR 482
+P+ R +V ++T+ + +MM + R
Sbjct: 270 QSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASR 309
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 101 bits (241), Expect = 6e-22
Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = +3
Query: 6 GTLLISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDNEA 182
G+LL+ ++RE +P +++ TYSV + S D VV PYN LS+ +L+EN D +DN A
Sbjct: 152 GSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAA 211
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
L+ + K TPT+ +N LV+ MS T RF + +R L ++ PFP +HF
Sbjct: 212 LHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFI 269
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPR 482
+P+ R +V ++T+ + +MM + R
Sbjct: 270 QSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASR 309
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +1
Query: 10 PSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYT 189
PS++ +TPT + T T +P+P T +S T + ++ T +PT +TT
Sbjct: 597 PSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKP 656
Query: 190 TSASALSNCPHPPTVTL 240
+ + PPT T+
Sbjct: 657 VTLTT-QTWTAPPTTTV 672
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +1
Query: 10 PSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYT 189
PS++ +TPT + T T +P+P T +S T + ++ T +PT +TT
Sbjct: 597 PSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKP 656
Query: 190 TSASALSNCPHPPTVTL 240
+ + PPT T+
Sbjct: 657 VTLTT-QTWTAPPTTTV 672
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 82 PKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTT 246
P T + T ++ T + T T+P +TT TTS ++ + P T T TT
Sbjct: 32 PTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTT 86
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.40
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 13 SSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFT-S*LKTQTKPTASTTRLYT 189
+S+ R++ +T T + T + P+ S+ T+ ++ + S L+T TKP +TT T
Sbjct: 141 ASTARTISTTETTTSPPTT-TVTPRTTRSSTARTVATTKTSPSTLRTTTKPPTTTTIATT 199
Query: 190 TSASALSNCPHPPTVTLTT 246
+ + P P T T+TT
Sbjct: 200 RITTKTTTSPPPFTTTVTT 218
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +1
Query: 142 LKTQTKP----TASTTRLYTTSASALSNCPHPPTVTLT 243
LKT TKP T ST R+ TT AS L P PT T
Sbjct: 107 LKTTTKPVITATRSTARITTTKASTLEP-PEAPTKAST 143
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 31.9 bits (69), Expect = 0.40
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 10 PSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYT 189
P S ++ T+S H S P T+ ++ T+ + + T T P +TT T
Sbjct: 313 PISGVKAKDPANTKSSAHLDNSDVPT-TTVQTSTTVPTTPSKTTATTTTTPKPTTTETAT 371
Query: 190 TSASALS-NCPHPPTVTLTT*FPS 258
TS+S + P TVT TT PS
Sbjct: 372 TSSSTTTVTTQKPTTVTSTTTLPS 395
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.9 bits (69), Expect = 0.40
Identities = 39/139 (28%), Positives = 53/139 (38%), Gaps = 4/139 (2%)
Frame = +1
Query: 10 PSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*L--KTQTKP--TASTT 177
P+SS +K T T + T P T T + TS + T P T +TT
Sbjct: 66 PTSSSTPIKETTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTT 125
Query: 178 RLYTTSASALSNCPHPPTVTLTT*FPSQCLVLPLALGSPVS*TLISENWP*TWFPSHVST 357
TTS S+ P T TT + P + +PV T + + P ST
Sbjct: 126 APETTSTEPPSSSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSST 185
Query: 358 SSCQVSLPSHPVEADSTVP 414
S Q + + P E ST P
Sbjct: 186 SPVQTTTTTAP-ETTSTEP 203
Score = 28.3 bits (60), Expect = 4.9
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 7 APSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKP-TASTTRL 183
APSSS V++T T + T P P SS ++ + T+ T T+P ++STT +
Sbjct: 157 APSSSTTPVQTTTTTAPETTSTEP-PS----SSTSPVQTTTTTAPETTSTEPPSSSTTPV 211
Query: 184 YTTSASALSNCPHPPTVTLTT 246
TT+ +A P + TT
Sbjct: 212 QTTTTTAPETTSTEPPSSSTT 232
Score = 27.5 bits (58), Expect = 8.5
Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Frame = +1
Query: 10 PSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKP--------- 162
PSSS V++T T + T P P SS ++ + T+ T T+P
Sbjct: 457 PSSSTTPVQTTTTTAPETTSTEP-PS----SSTTPVQTTTITAPETTSTEPPSSSTTPVQ 511
Query: 163 TASTTRLYTTSASALSNCPHPPTVTLTT*FPSQCLVLPLALGSPVS*TLISENWP*TWFP 342
T +TT TTS + S+ P T TT + P + +PV T + + P
Sbjct: 512 TTTTTAPETTSTESPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEP 571
Query: 343 SHVSTSSCQVSLPSHPVEADSTVP 414
ST+ Q + + P E ST P
Sbjct: 572 PSSSTTPVQTTTTTAP-ETTSTEP 594
Score = 27.5 bits (58), Expect = 8.5
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +1
Query: 10 PSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKP-TASTTRLY 186
PSSS V++T T + T P P SSN ++ + T+ T T+P ++ST+ +
Sbjct: 664 PSSSTTPVQTTTTTAPETTSTEP-PS----SSNTPVQTTTTTAPETTSTEPPSSSTSPVQ 718
Query: 187 TTSASALSNCPHPPTVTLTT*FPSQCLVLP 276
TT+ +A P + TT + + P
Sbjct: 719 TTTTTAPETTSTEPPSSSTTPVQTTTITAP 748
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 31.1 bits (67), Expect = 0.69
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = +1
Query: 37 STPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNC 216
+TPT T +P KY T S + T+ T TKPT +TT TT+ + +
Sbjct: 222 ATPTCRYDPTSTAPHIKYDT-SYTCASTTTVSTTSTVTTTKPTTTTTTPTTTTTTPTTTT 280
Query: 217 PHPPTVTLTT 246
P T TT
Sbjct: 281 TTPTTTPTTT 290
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 79 RPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLT 243
+PK T ++ T + T+ T T PT +TT TT+ + + P T T T
Sbjct: 82 KPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTT 136
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +1
Query: 37 STPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNC 216
+T T + T T + + T + T T+ T T PT +TT TT + +
Sbjct: 91 TTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTET 150
Query: 217 PHPPTVTLTT 246
PT T TT
Sbjct: 151 TTTPTTTTTT 160
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 82 PKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTT*FPS 258
PK+ T + T+ T T PT +TT TT+ + + P T T TT P+
Sbjct: 55 PKWVKADCTTTSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPT 113
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 13 SSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTT 192
+++ + +TPT + T T + T ++ T + T+ T T PT +TT TT
Sbjct: 193 TTAPTTTTTTPTTT-TTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTT 251
Query: 193 SASALSNCPHPPTVTLTT*FPSQCLVLP 276
S + + P T T TT P+ P
Sbjct: 252 SETTTTT---PTTTTQTTTKPTTTTTTP 276
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 321 LAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM-AACDPRHGRYL 497
L M PF LH +P + RG ++LT E+ +Q+ NM+ + + +G+ +
Sbjct: 6 LTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLT--EMHRQLLTKTNMIDSVIETYNGKPI 63
Query: 498 TVAAIFRGRMSMKEVDE 548
A + + +KE DE
Sbjct: 64 PAAIEAKKKQIIKERDE 80
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 19 SQRSVKSTPTES*THTQ*SPRPKY-QTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTS 195
S + S PT + T + RP+ +T ++ T T+ KT T P +TTRL TT
Sbjct: 348 SIEELMSPPTTTTTLQTTTTRPQTTKTTTTPQTTTTRPQTT--KTTTTPQTTTTRLQTTR 405
Query: 196 ASALSNCPHPPTV 234
+ P PTV
Sbjct: 406 RPPIRVTPRLPTV 418
>Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical
protein T07C12.8 protein.
Length = 965
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 94 TLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTT 246
T +++ + L S L + T PT + L TT++S S PPT T T+
Sbjct: 401 TTTTDIPLELEAKISILSSTTAPTTTAQVLTTTTSSEPSTTTTPPTTTQTS 451
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 94 TLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALS-NCPHPPTVTLTT*FPS 258
T+ ++ T+ + + T T P +TT TTS+S + P TVT TT PS
Sbjct: 499 TVQTSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPS 554
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 94 TLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALS-NCPHPPTVTLTT*FPS 258
T+ ++ T+ + + T T P +TT TTS+S + P TVT TT PS
Sbjct: 380 TVQTSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPS 435
>U28940-5|AAA68351.1| 156|Caenorhabditis elegans Hypothetical
protein T24H7.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 207 LKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 383
L ++ T+ + H + LT G +N D R+L ++ F LH + +PL
Sbjct: 73 LFINVTTFENHTHCIELTQKGWRVASNRNDCMNGDFRQLDIHTKYFESLHTLLMDISPL 131
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 336 VPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHG 488
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 336 VPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHG 488
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z75529-7|CAE54888.1| 382|Caenorhabditis elegans Hypothetical
protein C44H9.7b protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.9
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 5/158 (3%)
Frame = +3
Query: 165 CIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVP- 341
C++ E C T L+H S + C+RFP + + + V +P
Sbjct: 69 CLEQETENATCLTKYSTCTTAVFSLSH-----PSDLVACIRFPSDVLNNFANITVQPIPQ 123
Query: 342 FPRLHFF---MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAI 512
P+L F G L + R +T L + NM A +P + A++
Sbjct: 124 IPKLRFITNNSSGSHELLEHCPNRSRTITTC-LNNFQDEVTNMKKA-NPNSEKSQAFASV 181
Query: 513 FRGRMSMKEVDEQMLNIQN-KNSSYFVEWIPNNVKTAV 623
F G ++ E L +N K ++ NN++ +V
Sbjct: 182 F-GVAKLRARLEMFLRSENGKKCGNGIQDFLNNLEKSV 218
>Z75529-6|CAA99785.1| 269|Caenorhabditis elegans Hypothetical
protein C44H9.7a protein.
Length = 269
Score = 28.3 bits (60), Expect = 4.9
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 5/158 (3%)
Frame = +3
Query: 165 CIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVP- 341
C++ E C T L+H S + C+RFP + + + V +P
Sbjct: 69 CLEQETENATCLTKYSTCTTAVFSLSH-----PSDLVACIRFPSDVLNNFANITVQPIPQ 123
Query: 342 FPRLHFF---MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAI 512
P+L F G L + R +T L + NM A +P + A++
Sbjct: 124 IPKLRFITNNSSGSHELLEHCPNRSRTITTC-LNNFQDEVTNMKKA-NPNSEKSQAFASV 181
Query: 513 FRGRMSMKEVDEQMLNIQN-KNSSYFVEWIPNNVKTAV 623
F G ++ E L +N K ++ NN++ +V
Sbjct: 182 F-GVAKLRARLEMFLRSENGKKCGNGIQDFLNNLEKSV 218
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 157 KPTASTTRLYTTSASALSNCPHPPTVTLTT 246
K T+ST+++ TT S S+ P P + ++TT
Sbjct: 830 KKTSSTSKISTTPTSPTSSKPTPTSTSMTT 859
>U40029-7|AAA81127.1| 645|Caenorhabditis elegans Yeast scc (mitotic
condensin subunit)homolog protein 1 protein.
Length = 645
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = -1
Query: 362 EEVETWEGNHVYGQFSEISVQLTGEPKA 279
+E E+W+ +H+YG +S++ T +P++
Sbjct: 166 DEGESWQLDHLYGSVEPLSLRPTPQPES 193
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 148 TQTKPTASTTRLYTTSASALSNCPHPPTVTLTT*FP 255
T T P STT+ +T+ SA+++ PT ++T P
Sbjct: 475 TATTPPGSTTQAASTTESAMASSIESPTASVTVSSP 510
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 79 RPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHP 225
+ + ++L + ++ S T+ T KPT+++T+ TTS+S+ + P P
Sbjct: 657 KSRKKSLKNTPSVPTSTITTTSTTTNKPTSTSTK-QTTSSSSTEHSPSP 704
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,539,293
Number of Sequences: 27780
Number of extensions: 325989
Number of successful extensions: 1118
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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