Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1302
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 392 e-110
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 392 e-110
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 391 e-109
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 391 e-109
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 389 e-109
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 387 e-108
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 386 e-108
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 385 e-107
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 385 e-107
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 202 2e-52
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 200 6e-52
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 200 6e-52
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 196 1e-50
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 196 1e-50
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 196 1e-50
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 196 1e-50
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 143 8e-35
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 142 1e-34
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 38 0.007
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 38 0.007
At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ b... 33 0.16
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 32 0.28
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 32 0.37
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 31 0.85
At1g26890.1 68414.m03279 hypothetical protein 28 6.0
At1g06490.1 68414.m00688 glycosyl transferase family 48 protein ... 28 6.0
At4g38110.1 68417.m05382 expressed protein 27 7.9
At3g11130.1 68416.m01349 clathrin heavy chain, putative similar ... 27 7.9
At3g08530.1 68416.m00990 clathrin heavy chain, putative similar ... 27 7.9
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 392 bits (966), Expect = e-110
Identities = 179/211 (84%), Positives = 197/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQM+N+QNKNSSYFVEWIPNNVK+ VCDIP
Sbjct: 327 DEQMINVQNKNSSYFVEWIPNNVKSTVCDIP 357
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 392 bits (966), Expect = e-110
Identities = 180/211 (85%), Positives = 196/211 (92%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKLSTP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYR LTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLN+QNKNSSYFVEWIPNNVK+ VCDIP
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 391 bits (962), Expect = e-109
Identities = 178/211 (84%), Positives = 197/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYR+LTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLN+QNKNSSYFVEWIPNNVK+ VCDIP
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 391 bits (962), Expect = e-109
Identities = 178/211 (84%), Positives = 197/211 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYR+LTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQMLN+QNKNSSYFVEWIPNNVK+ VCDIP
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 389 bits (957), Expect = e-109
Identities = 177/210 (84%), Positives = 197/210 (93%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDI 632
DEQM+N+QNKNSSYFVEWIPNNVK++VCDI
Sbjct: 327 DEQMINVQNKNSSYFVEWIPNNVKSSVCDI 356
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 387 bits (952), Expect = e-108
Identities = 176/210 (83%), Positives = 195/210 (92%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+ PT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QY AL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 267 MVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDI 632
DEQM+N+QNKNSSYFVEWIPNNVK++VCDI
Sbjct: 327 DEQMMNVQNKNSSYFVEWIPNNVKSSVCDI 356
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 386 bits (950), Expect = e-108
Identities = 176/210 (83%), Positives = 195/210 (92%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 147 MGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 206
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKL+ PT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 207 LYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 266
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QY AL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG++S KEV
Sbjct: 267 MVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEV 326
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDI 632
DEQM+NIQNKNSSYFVEWIPNNVK++VCDI
Sbjct: 327 DEQMMNIQNKNSSYFVEWIPNNVKSSVCDI 356
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 385 bits (947), Expect = e-107
Identities = 177/211 (83%), Positives = 196/211 (92%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 148 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 207
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKLSTP++GDLNHL+S TMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 208 LYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFF 267
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QY +LTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEV
Sbjct: 268 MVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 327
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQ+LN+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 328 DEQILNVQNKNSSYFVEWIPNNVKSSVCDIP 358
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 385 bits (947), Expect = e-107
Identities = 178/211 (84%), Positives = 196/211 (92%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
MGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEA
Sbjct: 148 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEA 207
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
LYDICFRTLKLSTP++GDLNHL+S TMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFF
Sbjct: 208 LYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFF 267
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
M GFAPLTSRGS+QY +LTVPELTQQM+D+KNMM A DPRHGRYLT +AIFRG+MS KEV
Sbjct: 268 MVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEV 327
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 635
DEQ+LNIQNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 328 DEQILNIQNKNSSYFVEWIPNNVKSSVCDIP 358
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 202 bits (493), Expect = 2e-52
Identities = 85/207 (41%), Positives = 134/207 (64%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LL+ ++ ++ + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA
Sbjct: 149 LGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEA 208
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
+YDIC R+L + PTY +LN L+S T+S +TT LRF G +N D+ + N+VP+PR+HF
Sbjct: 209 IYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFM 268
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
+ +AP+ S + +VPE+T +F+ NMMA CDPRHG+Y+ ++RG + K+V
Sbjct: 269 LSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDV 328
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ + I+ K + FV+W P K +
Sbjct: 329 NTAVAAIKAKRTIQFVDWCPTGFKCGI 355
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 200 bits (488), Expect = 6e-52
Identities = 85/207 (41%), Positives = 134/207 (64%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEA 208
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF
Sbjct: 209 IYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFM 268
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
+ +AP+ S + L+VPE+T +F+ +MMA CDPRHG+Y+ ++RG + K+V
Sbjct: 269 LSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDV 328
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ + I+ K + FV+W P K +
Sbjct: 329 NAAVGTIKTKRTVQFVDWCPTGFKCGI 355
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 200 bits (488), Expect = 6e-52
Identities = 85/207 (41%), Positives = 134/207 (64%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEA 208
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF
Sbjct: 209 IYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFM 268
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
+ +AP+ S + L+VPE+T +F+ +MMA CDPRHG+Y+ ++RG + K+V
Sbjct: 269 LSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDV 328
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ + I+ K + FV+W P K +
Sbjct: 329 NAAVGTIKTKRTVQFVDWCPTGFKCGI 355
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 196 bits (477), Expect = 1e-50
Identities = 86/207 (41%), Positives = 133/207 (64%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEA 208
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF
Sbjct: 209 IYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFM 268
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
+ +AP+ S + L+V E+T F+ +MMA CDPRHG+Y+ ++RG + K+V
Sbjct: 269 LSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDV 328
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ + I+ K + FV+W P K +
Sbjct: 329 NAAVGTIKTKRTIQFVDWCPTGFKCGI 355
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 196 bits (477), Expect = 1e-50
Identities = 86/207 (41%), Positives = 133/207 (64%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEA 208
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF
Sbjct: 209 IYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFM 268
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
+ +AP+ S + L+V E+T F+ +MMA CDPRHG+Y+ ++RG + K+V
Sbjct: 269 LSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDV 328
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ + I+ K + FV+W P K +
Sbjct: 329 NAAVGTIKTKRTIQFVDWCPTGFKCGI 355
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 196 bits (477), Expect = 1e-50
Identities = 86/207 (41%), Positives = 133/207 (64%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEA 208
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF
Sbjct: 209 IYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFM 268
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
+ +AP+ S + L+V E+T F+ +MMA CDPRHG+Y+ ++RG + K+V
Sbjct: 269 LSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDV 328
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ + I+ K + FV+W P K +
Sbjct: 329 NAAVGTIKTKRTIQFVDWCPTGFKCGI 355
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 196 bits (477), Expect = 1e-50
Identities = 86/207 (41%), Positives = 133/207 (64%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 182
+G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEA 208
Query: 183 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 362
+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF
Sbjct: 209 IYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFM 268
Query: 363 MPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 542
+ +AP+ S + L+V E+T F+ +MMA CDPRHG+Y+ ++RG + K+V
Sbjct: 269 LSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDV 328
Query: 543 DEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ + I+ K + FV+W P K +
Sbjct: 329 NAAVGTIKTKRTIQFVDWCPTGFKCGI 355
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 143 bits (347), Expect = 8e-35
Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 7/214 (3%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNE 179
MG+ L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN
Sbjct: 149 MGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNT 208
Query: 180 ALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHF 359
AL I L L+ PT+ N LVS MS TT LR+PG +N DL L +++P PR HF
Sbjct: 209 ALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268
Query: 360 FMPGFAPLT-SRGSRQYRALTVPELTQQMFDAKNMMAACDPRH-----GRYLTVAAIFRG 521
M G+ PLT R + R TV ++ +++ KN+M + R+ +Y+++ I +G
Sbjct: 269 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQG 328
Query: 522 RMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ +V E + I+ + F+EW P +++ A+
Sbjct: 329 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVAL 362
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 142 bits (345), Expect = 1e-34
Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 7/214 (3%)
Frame = +3
Query: 3 MGTLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNE 179
MG+ L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN
Sbjct: 149 MGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNT 208
Query: 180 ALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHF 359
AL I L L+ PT+ N LVS MS TT LR+PG +N DL L +++P PR HF
Sbjct: 209 ALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268
Query: 360 FMPGFAPLT-SRGSRQYRALTVPELTQQMFDAKNMMAACDPRH-----GRYLTVAAIFRG 521
M G+ PLT R + R TV ++ +++ KN+M + R+ +Y+++ I +G
Sbjct: 269 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQG 328
Query: 522 RMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 623
+ +V E + I+ + F++W P +++ A+
Sbjct: 329 EVDPTQVHESLQRIRERKLVNFIDWGPASIQVAL 362
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 37.5 bits (83), Expect = 0.007
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 126 SVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPG-QL 302
++ LVE + ++N DIC+ S PT +L LVSL + G + RFP
Sbjct: 819 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDIST 878
Query: 303 N---ADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTV 422
N DL + + VP+ +FF LT +G R+ + +++
Sbjct: 879 NIKYLDLDQTGIEEVPWQIENFF--NLTKLTMKGCRELKCVSL 919
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 37.5 bits (83), Expect = 0.007
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 126 SVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPG-QL 302
++ LVE + ++N DIC+ S PT +L LVSL + G + RFP
Sbjct: 780 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDIST 839
Query: 303 N---ADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTV 422
N DL + + VP+ +FF LT +G R+ + +++
Sbjct: 840 NIKYLDLDQTGIEEVPWQIENFF--NLTKLTMKGCRELKCVSL 880
>At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ
boundaries domain protein 30 (LBD30) identical to LOB
DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported
by full-length cDNA gi:16660631
Length = 228
Score = 33.1 bits (72), Expect = 0.16
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +3
Query: 177 EALYDICFRT-LKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 353
+A+ ICF +L P YG ++H+VSL V+ +L+ LA +P P+
Sbjct: 73 DAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVS----LQTELSYLQAHLATLELPQPQ- 127
Query: 354 HFFMPGFAPLTSRGSRQYRALT-VPELTQQMFDAKNM 461
P P++S GS Q ++T +P ++ ++D ++
Sbjct: 128 ----PPQVPVSSSGSLQALSITDLPTISPSVYDLSSI 160
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +3
Query: 90 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 221
S+ ++ P ++++ +LV D TY + + ++ D C R +K+ST
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMST 120
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 293 RSVER*SQKIGRKHGSLPTSPLLHARFRSPHIPWKQTVPCLD 418
+ VER QKI RK S LL + R P W ++ P L+
Sbjct: 588 QEVERVRQKIRRKEASSSYQALLVEKIRDPEASWTESKPILE 629
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 30.7 bits (66), Expect = 0.85
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +3
Query: 234 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRA 413
+L++L+ L MSG T FP +N K +N+ RL F ++ Q
Sbjct: 813 NLHNLIELDMSGCTNLETFPTGINLQSLK-RINLARCSRLKIFPDISTNISELDLSQTAI 871
Query: 414 LTVPELTQQMFDAKNM-MAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFV 590
VP + K + M C+ +L ++ + +K VD I +K Y +
Sbjct: 872 EEVPLWIENFSKLKYLIMGKCNMLEYVFLNISKL----KHLKSVDFSDCGILSKADMYML 927
Query: 591 EWIPNNVKTAV 623
+ +PN +++
Sbjct: 928 Q-VPNEASSSL 937
>At1g26890.1 68414.m03279 hypothetical protein
Length = 280
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 204 TLKLSTPTYGDLNHLVSLTMSG-VTTCLRFPGQLNADLRKLAVNMVPFPRLHF 359
TL L Y D LVSL S V CL+ + +L K V + +LH+
Sbjct: 110 TLSLRFVVYKDEESLVSLLSSSPVLNCLKVDRHKDDNLTKFTVKVSTLKQLHY 162
>At1g06490.1 68414.m00688 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1933
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +3
Query: 240 NHLVSLTMSGVTTCLRFPGQLNADLRKLAV--NMVPFPRLHFFMPGFAPLTSRGSRQYRA 413
+ LV +++ + LR ++ D ++A F + H P + RG RQ++
Sbjct: 48 SELVPSSLASIAPILRVANDIDQDNARVAYLCRFHAFEKAHRMDP---TSSGRGVRQFKT 104
Query: 414 LTVPELTQQMFDAKNMMAACDPR 482
+ +L ++ ++M+A DPR
Sbjct: 105 YLLHKLEEEEEITEHMLAKSDPR 127
>At4g38110.1 68417.m05382 expressed protein
Length = 475
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/48 (22%), Positives = 28/48 (58%)
Frame = +2
Query: 77 LAQSIRHCRRTIQCDSLSSPAS*KHRRNLLHRQRGSIRHLLPHSQTVH 220
+ + + H +++ D ++PA+ K++R+L ++ ++ HLL + H
Sbjct: 347 VVKGVEHTLQSLHSDRETTPANFKYKRSLENQLTSTMLHLLSLVSSCH 394
>At3g11130.1 68416.m01349 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1705
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 432 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSY 584
T +D+K + C+ R L V A RG + DE+++N+ NKNS +
Sbjct: 910 TNPYYDSKVVGKYCEKRDPT-LAVVAYRRG-----QCDEELINVTNKNSLF 954
>At3g08530.1 68416.m00990 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1703
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 432 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSY 584
T +D+K + C+ R L V A RG + DE+++N+ NKNS +
Sbjct: 910 TNPYYDSKVVGKYCEKRDPT-LAVVAYRRG-----QCDEELINVTNKNSLF 954
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,791,690
Number of Sequences: 28952
Number of extensions: 305558
Number of successful extensions: 927
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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