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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1300
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.073
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   0.91 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   3.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.5 bits (58), Expect = 0.073
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +1

Query: 43   PKKKKWQRPKRSRHPTKATAPHLERKVTPTNMALPT 150
            P    WQ+P +  +   +T  H + K T +    PT
Sbjct: 1161 PSTSSWQKPTKPSYRPPSTTNHWQTKTTTSTTTRPT 1196


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 43  PKKKKWQRPKRSRHPTKATAPHLE 114
           PK+K W+  + S  PT + +P ++
Sbjct: 104 PKRKTWKVEEDSPSPTSSVSPEVK 127


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 396 GCRHRWR 416
           GC HRWR
Sbjct: 378 GCEHRWR 384


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 16  SDKSVLQWLPKKKKWQR 66
           S  S++QW+  +K W R
Sbjct: 374 STPSIVQWMQDQKGWGR 390


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 294 GIWVCGGCRGDCIRIVR 244
           G++ C GC+G   R VR
Sbjct: 99  GVYSCEGCKGFFKRTVR 115


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -3

Query: 65  RCHFF--FFGSHCKTDLSLTDGA 3
           RCH    + GS+C+T+++  D A
Sbjct: 169 RCHCSDGYSGSYCQTEINECDSA 191


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 380 NKITPKIFWMQ 348
           NKI  K+FW Q
Sbjct: 385 NKIAMKLFWAQ 395


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +1

Query: 34  QWLPKKKKWQRPKRSRHPTKATAPHLERKVTPTNMALPT 150
           Q L +++     + +  PTK  A        P ++A PT
Sbjct: 184 QQLQQQQNKSASRTTTSPTKVKASKASPAAAPRSVATPT 222


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 321 HAGWWGWLG 295
           H+G+WG LG
Sbjct: 198 HSGFWGQLG 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,283
Number of Sequences: 336
Number of extensions: 2823
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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