Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1300
         (511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    73   7e-15
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    23   1.1  
Z22930-4|CAA80516.1|  267|Anopheles gambiae Trypsinogen precurso...    25   2.0  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   2.6  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   2.6  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   2.6  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   2.6  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   2.6  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   2.6  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   2.6  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   2.6  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   4.5  
AY331406-1|AAQ97587.1|   96|Anopheles gambiae agCP14332 protein.       23   4.5  
AY331405-1|AAQ97586.1|   96|Anopheles gambiae agCP14332 protein.       23   4.5  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   7.9  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 72.5 bits (170), Expect = 7e-15
 Identities = 32/64 (50%), Positives = 46/64 (71%)
 Frame = +1

Query: 316 RMGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIAT 495
           + G + GV + C+ NI+GV+LF+RL+WVVG AG  QG L++      T +TA+SMSAI+T
Sbjct: 187 KFGWIKGVLMRCLLNIWGVMLFLRLSWVVGQAGIAQGVLLICMTTVVTTITALSMSAIST 246

Query: 496 RGVV 507
            GV+
Sbjct: 247 NGVI 250


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.0 bits (47), Expect(2) = 1.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 378 IHPAHLGCRHRWRYTRIP 431
           IHPAHL  R   +Y  +P
Sbjct: 57  IHPAHLSQRFYEQYKAVP 74



 Score = 20.6 bits (41), Expect(2) = 1.1
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +3

Query: 294 PQASPTSPHGHAHRRVPALHPEYL 365
           P   P  P+G+      ++HP +L
Sbjct: 39  PYVEPELPYGNFKEMGKSIHPAHL 62


>Z22930-4|CAA80516.1|  267|Anopheles gambiae Trypsinogen precursor
           of ANTRYP7 protein.
          Length = 267

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 288 RCPQASPTSPHGHAHRRV 341
           R P   P SPHG  HR V
Sbjct: 26  RHPLVQPRSPHGSGHRIV 43


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 272 HPPQTQMPPSQPH 310
           +PP T  PPS PH
Sbjct: 271 YPPTTNEPPSTPH 283


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 272 HPPQTQMPPSQPH 310
           +PP T  PPS PH
Sbjct: 271 YPPTTNEPPSTPH 283


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 272 HPPQTQMPPSQPH 310
           +PP T  PPS PH
Sbjct: 271 YPPTTNEPPSTPH 283


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 272 HPPQTQMPPSQPH 310
           +PP T  PPS PH
Sbjct: 270 YPPTTNEPPSTPH 282


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 272 HPPQTQMPPSQPH 310
           +PP T  PPS PH
Sbjct: 270 YPPTTNEPPSTPH 282


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 272 HPPQTQMPPSQPH 310
           +PP T  PPS PH
Sbjct: 271 YPPTTNEPPSTPH 283


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 272 HPPQTQMPPSQPH 310
           +PP T  PPS PH
Sbjct: 271 YPPTTNEPPSTPH 283


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 272 HPPQTQMPPSQPH 310
           +PP T  PPS PH
Sbjct: 271 YPPTTSEPPSTPH 283


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 479 IDIAVNIVVQQQVRTMRNPCIAPAV 405
           IDI  N+ +Q+Q  T R   I PA+
Sbjct: 231 IDITYNVTLQRQSDTHRAIVIVPAL 255


>AY331406-1|AAQ97587.1|   96|Anopheles gambiae agCP14332 protein.
          Length = 96

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 231 PQLASGLCEYNPHGIRRRPRC 293
           P + +G     P  +RRR RC
Sbjct: 41  PNVENGAANLTPGNVRRRTRC 61


>AY331405-1|AAQ97586.1|   96|Anopheles gambiae agCP14332 protein.
          Length = 96

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 231 PQLASGLCEYNPHGIRRRPRC 293
           P + +G     P  +RRR RC
Sbjct: 41  PNVENGAANLTPGNVRRRTRC 61


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +3

Query: 288 RC-PQASPTSPHGHAHRRVP 344
           RC PQ++P+ PH H   + P
Sbjct: 6   RCSPQSAPSPPHHHHSSQSP 25


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +3

Query: 288 RC-PQASPTSPHGHAHRRVP 344
           RC PQ++P+ PH H   + P
Sbjct: 6   RCSPQSAPSPPHHHHSSQSP 25


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = +3

Query: 105 SPGKKGDPDEHGTTHGTSNKGCDTNL-YALSRRDRGPT*SSHVPQLASGLCEYNPHGIRR 281
           +PGK G P  HG T      G   N+ Y+  + D+G +     P    G C   P  +  
Sbjct: 716 APGKDGLPGRHGQT-VKGEPGLKGNVGYSGDKGDKGYSGLKGEP----GRCASIPPNLEE 770

Query: 282 RPRCPQ 299
             R PQ
Sbjct: 771 AIRGPQ 776


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,562
Number of Sequences: 2352
Number of extensions: 11942
Number of successful extensions: 51
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)