Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1300
(511 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.45
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.45
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 25 0.45
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 0.45
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 1.4
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 23 1.8
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 4.2
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 4.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 5.6
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 5.6
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 5.6
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 7.4
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 7.4
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 21 7.4
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 7.4
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 9.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.8
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 9.8
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.0 bits (52), Expect = 0.45
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 458 VVQQQVRTMRNPCIAPAVPTTQVSRMNKITPKIF 357
V+ + VR C P P+TQ +TPK F
Sbjct: 376 VLMRTVRGKEKTCYYPYHPSTQEDSEEHLTPKRF 409
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.0 bits (52), Expect = 0.45
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 458 VVQQQVRTMRNPCIAPAVPTTQVSRMNKITPKIF 357
V+ + VR C P P+TQ +TPK F
Sbjct: 376 VLMRTVRGKEKTCYYPYHPSTQEDSEEHLTPKRF 409
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 25.0 bits (52), Expect = 0.45
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 153 TSNKGCDTNLYALSRRDRGPT*SSHVPQLASGLCEYNP 266
T +G D + A+ R DR P+ S VPQ + + + +P
Sbjct: 88 TLRRGSDGSQLAM-RNDRSPSYSMQVPQQGASIDDSDP 124
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 25.0 bits (52), Expect = 0.45
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 153 TSNKGCDTNLYALSRRDRGPT*SSHVPQLASGLCEYNP 266
T +G D + A+ R DR P+ S VPQ + + + +P
Sbjct: 536 TLRRGSDGSQLAM-RNDRSPSYSMQVPQQGASIDDSDP 572
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 306 GWLGGIWVCGGCRGDCIRIVR*RAEERGCSRS 211
G+ G+ C GC+G R ++ + + R C+++
Sbjct: 76 GFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKN 107
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +1
Query: 40 LPKKKKWQRPKRSRHPTKATAPHLER 117
+ +K+ W RP+ S T H ++
Sbjct: 41 IKRKRSWSRPRESAQTTSKAGIHRKK 66
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 294 GIWVCGGCRGDCIRIVR 244
G++ C GC+G R VR
Sbjct: 123 GVYSCEGCKGFFKRTVR 139
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 294 GIWVCGGCRGDCIRIVR 244
G++ C GC+G R VR
Sbjct: 123 GVYSCEGCKGFFKRTVR 139
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2
Query: 360 ILDARQVHADERAHAGWWGWL 298
+ D + AD +AG W WL
Sbjct: 397 VFDELLLDADWSVNAGMWMWL 417
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 5.6
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -2
Query: 312 WWGWL 298
WWGWL
Sbjct: 232 WWGWL 236
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 5.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 455 RRC*PQYQCLPSQRGA 502
RR P ++C PSQR A
Sbjct: 415 RRYQPAFRCKPSQRFA 430
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 7 PSVSDKSVLQWLPKKKKWQRPKRSR 81
P + K L++LP +RPK++R
Sbjct: 331 PQLIRKIFLKYLPTILMMRRPKKTR 355
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.0 bits (42), Expect = 7.4
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +2
Query: 275 PPQTQMPPSQPH 310
PP ++PP PH
Sbjct: 96 PPTRKLPPLHPH 107
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.0 bits (42), Expect = 7.4
Identities = 6/26 (23%), Positives = 12/26 (46%)
Frame = +1
Query: 40 LPKKKKWQRPKRSRHPTKATAPHLER 117
+ +K+ W RP+ T H ++
Sbjct: 162 IKRKRSWSRPREPAQTTSKAGIHRKK 187
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.0 bits (42), Expect = 7.4
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 200 RSRTDLEQPRSSAR*RTMRIQSPRHPPQTQMPPSQPHQ 313
RSR+ R S+ R S P + SQPHQ
Sbjct: 18 RSRSRRYSKRFSSSIVDRRSPSSSRSPSPSLLTSQPHQ 55
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.6 bits (41), Expect = 9.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 207 GPT*SSHVPQLASGLCEYNPHGIRRRP 287
G T + +PQ+ SG C+ N + RP
Sbjct: 231 GCTITRVIPQVCSGNCKLNDILLTVRP 257
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 9.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 70 KRSRHPTKATAPHLERKVTPT 132
++S + TK T P ERK T
Sbjct: 780 EQSPNSTKETTPKKERKTATT 800
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.6 bits (41), Expect = 9.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 207 GPT*SSHVPQLASGLCEYNPHGIRRRP 287
G T + +PQ+ SG C+ N + RP
Sbjct: 231 GCTITRVIPQVCSGNCKLNDILLTVRP 257
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,121
Number of Sequences: 438
Number of extensions: 3240
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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