Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1299
(412 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 85 3e-17
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 81 5e-16
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 71 4e-13
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 4e-13
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 69 2e-12
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 69 2e-12
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 68 3e-12
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 68 3e-12
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 65 2e-11
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 63 7e-11
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 62 2e-10
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 61 3e-10
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 60 5e-10
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 5e-10
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 58 2e-09
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 55 3e-08
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 54 6e-08
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 53 8e-08
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 53 1e-07
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 50 1e-06
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 49 1e-06
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 48 4e-06
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 48 4e-06
SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 9e-06
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 45 3e-05
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 45 3e-05
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 44 6e-05
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 9e-05
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 42 1e-04
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 42 2e-04
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 42 3e-04
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 42 3e-04
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 41 3e-04
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 3e-04
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 41 5e-04
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 40 6e-04
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 40 0.001
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 38 0.002
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 38 0.003
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 38 0.003
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 38 0.004
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 36 0.010
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 36 0.010
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 36 0.017
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 35 0.030
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.040
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 34 0.052
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.069
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 33 0.069
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 33 0.12
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 33 0.12
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 32 0.21
SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52) 30 0.85
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 30 0.85
SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05) 29 1.1
SB_39298| Best HMM Match : Ras (HMM E-Value=0.11) 29 1.1
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 29 1.5
SB_22875| Best HMM Match : Transposase_8 (HMM E-Value=0.86) 29 2.0
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 28 2.6
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 28 3.4
SB_12099| Best HMM Match : DUF1220 (HMM E-Value=4.3) 27 4.5
SB_48897| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10) 27 7.9
SB_42739| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-21) 27 7.9
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 84.6 bits (200), Expect = 3e-17
Identities = 40/89 (44%), Positives = 54/89 (60%)
Frame = +1
Query: 1 APMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPY 180
APMYYR A AA++V+DIT+ +F K WVKELQ +V+++ GNK+DL S R V Y
Sbjct: 87 APMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASKRMVEY 146
Query: 181 NEATQYAATIGAAYCETSALHDQGIEKVF 267
+A YA G + ETSA + +F
Sbjct: 147 EDAQSYAEDNGLLFMETSAKTAMNVNDIF 175
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 80.6 bits (190), Expect = 5e-16
Identities = 36/90 (40%), Positives = 59/90 (65%)
Frame = +1
Query: 1 APMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPY 180
AP+YYR+A AA+LV+DIT +F +++ W++ELQ P+ +V++V GNK D R V
Sbjct: 26 APLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQRDVQV 85
Query: 181 NEATQYAATIGAAYCETSALHDQGIEKVFK 270
+A +A ++ A + ETSAL + + +F+
Sbjct: 86 QDAQDFAGSVDAIFAETSALTSKNVHWLFE 115
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 70.9 bits (166), Expect = 4e-13
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A A+LV+DI SF + WV+EL+ + + + + ++GNKSDL+ LR +
Sbjct: 12 YYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRG 71
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFK 270
Q+AA G + ETSAL + + F+
Sbjct: 72 KQFAAEHGMLFMETSALDSTNVAEAFE 98
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 70.9 bits (166), Expect = 4e-13
Identities = 31/90 (34%), Positives = 53/90 (58%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A+ ++V+D+T +SF +K W++E+ E + +VGNK DL + + V + A
Sbjct: 98 YYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDFTTA 157
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+YA ++G + ETSA + +E+ F A
Sbjct: 158 KEYAESLGVPFLETSAKNATNVEQAFMTMA 187
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 68.9 bits (161), Expect = 2e-12
Identities = 32/85 (37%), Positives = 54/85 (63%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A A+LV+D+T ++F ++ W+ E++ + +V+ +VGNK DL+ LRAV ++A
Sbjct: 81 YYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDLKHLRAVASDDA 140
Query: 190 TQYAATIGAAYCETSALHDQGIEKV 264
+Y G A+ E SAL + + K+
Sbjct: 141 KKYGDEHGLAFIEASALDAKMLRKL 165
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 68.5 bits (160), Expect = 2e-12
Identities = 31/86 (36%), Positives = 52/86 (60%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A +LV+D+T+ +SF+ I W+K++ + E + +VGNK D+ R + +
Sbjct: 25 YYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNKCDMYDKRVISQTKG 84
Query: 190 TQYAATIGAAYCETSALHDQGIEKVF 267
Q A++ G ++ ETSAL + +EK F
Sbjct: 85 EQLASSYGISFIETSALSNINVEKSF 110
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 68.5 bits (160), Expect = 2e-12
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
Y R++ AAL+VFDIT+ SF ++ WVK ++ E V+ +VGNK D R V Y+ A
Sbjct: 232 YIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRRKVSYDVA 291
Query: 190 TQYAATIGAAYCETSALHDQGIEKVF 267
+ A +G +Y ETSA ++ +F
Sbjct: 292 EKSAERLGLSYVETSAKSGYNVKLLF 317
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 68.1 bits (159), Expect = 3e-12
Identities = 32/86 (37%), Positives = 55/86 (63%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A ALLV+DI+S ++F ++ W+ + ++ +V+ +VGNK DL++ R V + EA
Sbjct: 164 YYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNKKDLDADREVTFLEA 223
Query: 190 TQYAATIGAAYCETSALHDQGIEKVF 267
+++A + ETSAL + +E+ F
Sbjct: 224 SRFAQENELMFLETSALTGENVEEGF 249
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 67.7 bits (158), Expect = 3e-12
Identities = 30/90 (33%), Positives = 51/90 (56%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR+A+ +L++D+ ++F + W++E+ E + +VGNK DL R V YN A
Sbjct: 77 YYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTA 136
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTA 279
++A + ++ ETSA +E VF+ A
Sbjct: 137 KEFAEKLDISFIETSAKDSTNVESVFRTMA 166
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 64.9 bits (151), Expect = 2e-11
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A ALLV+DI ++ ++ W+KEL+ + +V+ +VGNKSDL LRAVP +EA
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEA 61
Query: 190 TQYA 201
+A
Sbjct: 62 KAFA 65
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 63.3 bits (147), Expect = 7e-11
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSD--LESLRAVP 177
P+ YR + A++VFD+T +SF + W+ ++Q + + + +VGNK+D L S + +P
Sbjct: 40 PLIYRALSGAVIVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTDRPLNSWK-IP 98
Query: 178 YNEATQYAATIGAAYCETSALHDQGIEKVF 267
N A +YA G Y ETSAL I+++F
Sbjct: 99 SNVAAKYATNNGFLYIETSALGMCNIDEIF 128
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 61.7 bits (143), Expect = 2e-10
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKGWVK--ELQSNVPEAMVLSVVGNKSDLESLRAVP 177
P Y+R LVFDIT +F + W+ S + L +VGNK D+E RAV
Sbjct: 419 PAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGNKKDMEDNRAVT 478
Query: 178 YNEATQYAATIGAAYCETSALHDQGIEKVFK 270
Y+ A ++AA G Y ETSA + +FK
Sbjct: 479 YSRAKEFAAMNGFPYIETSAKDVDSLMDMFK 509
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 61.3 bits (142), Expect = 3e-10
Identities = 28/86 (32%), Positives = 52/86 (60%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A+ ++V+DIT +S+ + W+ E+++ E + + +VGNK DL++ R V + A
Sbjct: 388 YYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKIDLDTDREVQPDAA 447
Query: 190 TQYAATIGAAYCETSALHDQGIEKVF 267
++AA + ETSA + +++ F
Sbjct: 448 QEWAALHDMPFVETSAKGAKNVKEAF 473
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 60.5 bits (140), Expect = 5e-10
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEA-MVLSVVGNKSDLESLRAVPYNE 186
YYRN L+++DIT+ SF + W KE + V EA +V +VG+K D ES R V E
Sbjct: 83 YYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDKESKRVVSTEE 142
Query: 187 ATQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+A + ETSA IE+ F + A
Sbjct: 143 GECFAEAHNMMFIETSAKVLCNIEEAFISVA 173
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 60.5 bits (140), Expect = 5e-10
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLE-SLRAVPYNE 186
YYRNA+A +LVFDIT+ +F +I W+ +Q + ++ +VGNK+DL+ + R V
Sbjct: 80 YYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKGASRKVNTRS 139
Query: 187 ATQYAATIGAAYCETSALHDQGIEKVFKNTA 279
A A Y ETSA D +E + A
Sbjct: 140 AANLAEFEELLYLETSAKWDDNVEVLIAELA 170
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 58.4 bits (135), Expect = 2e-09
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR+ N ++ +DIT +F + W +++Q PE + +VGNK DLE R V +A
Sbjct: 115 YYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVGNKKDLEREREVSLEDA 174
Query: 190 TQYAATIGAA-YCETSALHDQGIEKVFKNTA 279
A+ G ETSA IE F A
Sbjct: 175 VNCASHYGMLDVLETSAKDATNIEAAFYRLA 205
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDL---ESLRAVPY 180
Y+R A+ L+ +D+T+ SFT +K W+ ++ E + V+GNK+DL E R V
Sbjct: 965 YFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNKTDLAEDEESRVVKT 1024
Query: 181 NEATQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+ A A Y ETSA I++ A
Sbjct: 1025 IDGKNLANQYDALYMETSAKTGNNIQEAMYKLA 1057
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 54.0 bits (124), Expect = 5e-08
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVP-----EAMVLSVVGNKSDLESLRAV 174
+Y++ ALLV+D+TS +SF A+ W+ E++ ++ ++V V NK D R V
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSRK-RLV 68
Query: 175 PYNEATQYAATIGAAYCETSALHDQGIEKVFK 270
+E Q+A Y ETSA GI +VF+
Sbjct: 69 EESEGRQWAENHKFCYFETSAQTGDGIPEVFQ 100
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 53.6 bits (123), Expect = 6e-08
Identities = 27/86 (31%), Positives = 45/86 (52%)
Frame = +1
Query: 22 ANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYA 201
A +LV+DIT ++F I W++ ++ + E + ++GNK D++ R V Q A
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIA 184
Query: 202 ATIGAAYCETSALHDQGIEKVFKNTA 279
G + ETSA + IE+ F+ A
Sbjct: 185 REHGIRFLETSAKTNINIEQAFQYLA 210
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 53.2 bits (122), Expect = 8e-08
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAV 174
YYR A A+LV+DI SF + WV+EL+ + + + + ++GNKSDL+ LR +
Sbjct: 12 YYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMI 66
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/84 (28%), Positives = 45/84 (53%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR + ++V+D+TS +F +K W+ E+ N + ++ +VGNK D S + V +
Sbjct: 46 YYRGTHGVIVVYDVTSADTFVNVKRWLHEIDQNCDD-VIRILVGNKDDCPSKKVVETADL 104
Query: 190 TQYAATIGAAYCETSALHDQGIEK 261
++ + ETSA + +E+
Sbjct: 105 QKFGEQMNIRVFETSAKENINVEE 128
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 52.0 bits (119), Expect = 2e-07
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSV-VGNKSDLESLRAVPYNE 186
YYRN NA + ++DIT SF A+ W+ E + + V + +GNK DL R V N
Sbjct: 116 YYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLGLERTVSSNI 175
Query: 187 ATQYAATIGAAYCETSALHDQGIEKV 264
A ++A + E S +D +E++
Sbjct: 176 ARKFADSHNMPLWEISIKNDAELEQI 201
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/60 (33%), Positives = 39/60 (65%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YY NA+ ++ +DIT+ +SF ++ W+ + + +++++VGNKSDL + R V ++ A
Sbjct: 76 YYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSDLSTNRKVDFHHA 135
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 49.6 bits (113), Expect = 1e-06
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKE--LQSNV--PEAMVLSVVGNKSDLESLRAVP 177
+YR A+ +LVFD+T SF + W E +Q++ PE V+GNK DLE+ RAV
Sbjct: 17 FYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RAVS 75
Query: 178 YNEATQYA-ATIGAAYCETSALHDQGIEKVFKNTA 279
A + + Y ETSA +E+ F+ A
Sbjct: 76 AKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIA 110
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 49.2 bits (112), Expect = 1e-06
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 7 MYYRNANAALLVFDITSMQSFTAIKGWVKE-LQSNVPEAMVLSVVGNKSDLESLRAVPYN 183
+Y +N LLV+ + + Q+F +K + L+ E + + +VGNKSD+ R V
Sbjct: 54 LYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSVG 113
Query: 184 EATQYAATIGAAYCETSALHDQGIEKVF 267
EA A G + ETSA ++KVF
Sbjct: 114 EAKDLAEAWGCPFYETSAKTRSNVDKVF 141
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 47.6 bits (108), Expect = 4e-06
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = +1
Query: 1 APMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDL------ES 162
A Y+R A+ LL++D+T SF ++ WV+ ++ + + + + + GNK D+ E+
Sbjct: 508 AKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQSAAAEN 567
Query: 163 LRAVPYNEATQYAATIGAAYCETSALHDQGI 255
+ ++ A GA + ETS+ ++ I
Sbjct: 568 KTVITAESGSRLAKEHGALFIETSSKENKNI 598
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 47.6 bits (108), Expect = 4e-06
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEA-----MVLSVVGNKSDLESLRAV 174
Y N + ++V+ IT S+ + VK L + V + + + +VGNK DL R V
Sbjct: 30 YIHNGDGFVVVYSITDYYSYEMARQLVK-LVTQVRKTDDICQIPIVLVGNKRDLRRGRCV 88
Query: 175 PYNEATQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+EA ++A+ G ++ ETSAL ++ + +F N A
Sbjct: 89 AKDEAREFASEYGCSHYETSALTNRNVHVIFYNMA 123
>SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 46.4 bits (105), Expect = 9e-06
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +1
Query: 25 NAALLVFDITSMQSFTAIKGWVKELQSNVPEA--MVLSVVGNKSDLESLRAVPYNEATQY 198
+A LLV+ ITS+QSFT I +++L + + +L++V NK+D ES R V ++
Sbjct: 89 DAFLLVYSITSLQSFTDISCIIQQLTAMRTQGSHALLAIVANKTDAESQREVSTSDGVAL 148
Query: 199 AATIGAAYCETS-ALHDQGIEKVF 267
A ++ ++ E S + + +E+VF
Sbjct: 149 AQSLPCSFSEISTSTSYEDVERVF 172
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 45.2 bits (102), Expect = 2e-05
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKGWVK---ELQSNVPEAMVLSVVGNKSDLESLRAV 174
P+Y ++V+ I +++F K VK E++ ++ + GNK DL+ RAV
Sbjct: 188 PVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCRAV 247
Query: 175 PYNEATQYAATIGAAYCETSALHDQGIEKVF 267
EA ++AA + ETSA ++ + +F
Sbjct: 248 SRQEAREFAAEHECVFHETSAANNINTKVIF 278
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKG-WVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNE 186
++R A+ ALLVFD++ +SF +I+ W+ E + +VGNK D + + V +
Sbjct: 79 FFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCDKKD-KKVSEED 137
Query: 187 ATQYAATIGAAYCETSALHDQGIEKVFKNTA 279
++ ++ ETSA + + + F+ A
Sbjct: 138 IQNLSSCYNLSWLETSAKDNTNVNEAFEAMA 168
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKG-WVKELQSNVPEAMVLSVVGNKSDLES 162
P+ YR+ + ++ FDIT+ SF + WV EL+ +PE VL VVGNK D+ +
Sbjct: 87 PLEYRDTDVFIICFDITNPTSFQNVSTVWVPELKHYMPETPVL-VVGNKKDMRT 139
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 43.6 bits (98), Expect = 6e-05
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +1
Query: 1 APMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPY 180
A + Y + +LV+DIT+ +SF + W++ ++ + + + V+GNK D+E R V
Sbjct: 78 ADIIYEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSK 137
Query: 181 NEATQ 195
Q
Sbjct: 138 ERGEQ 142
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 43.2 bits (97), Expect = 9e-05
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +1
Query: 34 LLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYAATIG 213
LLV+DIT+ SF I W++ ++ N + ++GNK D E R +
Sbjct: 6 LLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGEDNN 65
Query: 214 AAYCETSALHDQGIEKVFKNTA 279
+ E SA + +++ F A
Sbjct: 66 LEFYEASARTGENVQQAFMAVA 87
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKGWVKELQS-NVPEAMVLSVVGNKSDLES 162
P YYR A +LV+D S ++F ++ W+ E++ + + +V +VGNK D S
Sbjct: 75 PSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKIDKHS 128
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +1
Query: 64 SFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYAATIGAAYCETSALH 243
SF W+ ++++ +++ +VGNK+DL R V E + A + + ETSA
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETSAKA 72
Query: 244 DQGIEKVFKNTA 279
++++F+ A
Sbjct: 73 GYNVKQLFRRVA 84
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/82 (30%), Positives = 43/82 (52%)
Frame = +1
Query: 25 NAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYAA 204
+A +L++ ITS +SF A+ + + +++ V+ ++ NK DL R V E Q A
Sbjct: 1060 DAFVLIYSITSRESFHAVWNYYYHVVTSIEAKPVIVLLANKHDLGHKRKVLTTEGRQMAQ 1119
Query: 205 TIGAAYCETSALHDQGIEKVFK 270
I + E SA +G E++ K
Sbjct: 1120 AIKCPFYEVSA--SEGFEQIRK 1139
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQS-NVPEAMVLSVVGNKSDLESLRAVPYNE 186
Y RN ++++ IT SF + +++ + + + +VGNK DLE R V E
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQE 64
Query: 187 ATQYAATIGAAYCETSALHDQGIEKVF 267
+ A + ETSA ++ F
Sbjct: 65 GQELAHRFDCPFFETSACQRHFVDDAF 91
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 133 VVGNKSDLESLRAVPYNEATQYAATIGAAYCETSALHDQGIEKVFK 270
+VGNK D+E R V Y+ Q A +G + ETSA + ++KVF+
Sbjct: 17 LVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVFE 62
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 41.1 bits (92), Expect = 3e-04
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +1
Query: 97 LQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYAATIGAAYCETSALHDQGIEK 261
LQ+NV A++L GNK+DLE R V EA A +G Y ETSA Q + K
Sbjct: 462 LQTNVTSAVLL---GNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTK 513
Score = 37.9 bits (84), Expect = 0.003
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSN 108
++R+A LLVFD+T QSF I+ W+ +LQ++
Sbjct: 186 FFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTH 218
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 41.1 bits (92), Expect = 3e-04
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKEL--QSNV--PEAMVLSVVGNKSDLESLRAVP 177
+YR ++ LLV+ + +SFT + W KE ++V + ++GNK D+E RAV
Sbjct: 280 FYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEG-RAVS 338
Query: 178 YNEATQYAATIGAA-YCETSALHDQGIEKVF 267
EA + G Y ETSA + F
Sbjct: 339 QEEADSWCRQNGGVPYFETSAKDSTNVNDAF 369
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 40.7 bits (91), Expect = 5e-04
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQS-NVPEAMVLSVVGNKSDLESLRAVPYNE 186
Y R L VF + + +SF I + ++++ E + + +VGNK DL R V ++
Sbjct: 297 YMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPMVLVGNKCDLPQ-RTVSTSD 355
Query: 187 ATQYAATIGAAYCETSALHDQGIEKVF 267
A + A + + ETSA QG++ F
Sbjct: 356 AQELAKSYNIPFQETSAKTRQGVDDAF 382
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 40.3 bits (90), Expect = 6e-04
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Frame = +1
Query: 7 MYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVP----EAMVLSVVGNKSDLESLRAV 174
+YY+ A A +VFD+T +F+A++ W +L + + E + ++ NK D ++ +
Sbjct: 709 VYYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCD-QAKEGL 767
Query: 175 PYNEA--TQYAATIG-AAYCETSALHDQGIEKVFK 270
N A +Y A G + ETSA D + + K
Sbjct: 768 VNNSAQMDEYCADKGFIGWFETSAKEDVNVNEAAK 802
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +1
Query: 34 LLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQY 198
LLV+DIT +SF ++ W++ ++ N + + +VGNK D+ R VP + ++
Sbjct: 60 LLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREVPKRKGEEH 114
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 38.3 bits (85), Expect = 0.002
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIK-GWVKELQSNVPEAMVLSVVGNKSDLE------- 159
P+ Y N + L+ FDI SF + W+ EL P + +VGNK DL
Sbjct: 73 PLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHFSP-GVPRVLVGNKKDLRPKQDQED 131
Query: 160 --SLRAVPYNEATQYAATIGAAYCETSALHDQGIEKV 264
S+ V Y E + A Y E SAL ++ +++V
Sbjct: 132 SHSIDFVSYEEGKEAAQNFKMQYIENSALLNENVKEV 168
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 13 YRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVL--SVVGNKSDLESLRAVPYNE 186
+ + N ++ +D+++ QSF A W++ +S L +++ K+DL+ R + +
Sbjct: 59 WEHPNLVIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDLKQRRVISTKQ 118
Query: 187 ATQYAATIGAAYCETSAL 240
YA + Y E SA+
Sbjct: 119 GKDYANSKNLEYFECSAI 136
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YY A+++FD+TS ++ + W ++L+ V E + + + GNK D++ + +A
Sbjct: 101 YYIQGQCAIIMFDVTSRVTYKNVPNWHRDLE-RVCENIPIVLCGNKVDIKDRKVKA--KA 157
Query: 190 TQYAATIGAAYCETSALHDQGIEKVF 267
+ Y + SA + EK F
Sbjct: 158 ITFHRKKNLQYYDLSAKSNYNFEKPF 183
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 37.9 bits (84), Expect = 0.003
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNV 111
+Y++ ALLV+D+TS +SF A+ W+ E++ ++
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDI 38
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 37.5 bits (83), Expect = 0.004
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKG-WVKELQSNVPEAMVLSVVGNKSDLESLR 168
P+ Y+ ++ LL FDI++ Q+F I+ W+ E +P ++ + ++GNK+D+ R
Sbjct: 70 PLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRV-LIGNKNDIRKTR 124
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 36.3 bits (80), Expect = 0.010
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1
Query: 133 VVGNKSDLESLRAVPYNEATQYAATIGAAYCETSALHDQGIEK 261
++GNK+DLE R V EA A +G Y ETSA Q + K
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTK 44
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 36.3 bits (80), Expect = 0.010
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 7 MYYRNANAALLVFDITSMQSFTAIKGWVKE-LQSNVPEAMVLSVVGNKSDLESLRAVPYN 183
+Y +N LLV+ + + Q+F +K + L+ E + + +VGNKSD+ R V +
Sbjct: 70 LYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSTS 129
Query: 184 EATQYAATIGAAYCETSALH 243
A + T E +LH
Sbjct: 130 NAKTFLETNKDGCDEARSLH 149
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 35.5 bits (78), Expect = 0.017
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLE 159
YYR A+A +L+F++ S + W+ + P+A+ + +V NK DL+
Sbjct: 80 YYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFCPDALKV-LVANKIDLD 128
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 34.7 bits (76), Expect = 0.030
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKE-LQSNVPEAMVLSVVGNKSDLESLRAVPYNE 186
Y R+ LLVF +T SF I + + L+ + + GNKSDLE R V E
Sbjct: 79 YMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLEYERTVSTAE 138
Query: 187 ATQYA 201
+ A
Sbjct: 139 GQELA 143
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 34.3 bits (75), Expect = 0.040
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKG-WVKELQ---SNVPEAMVLSVVGNKSDLESLR--- 168
+++ A+ LL FDI + +SF I+ W+ + S+VP+ +V GNK +L +
Sbjct: 77 WFQYASVFLLCFDIANRESFANIESTWLPHVNLETSDVPKVLV----GNKMELRCSQQES 132
Query: 169 --------AVPYNEATQYAATIGAAYCETSALHDQGIEKV 264
VP+ EA A Y E SA +G+E V
Sbjct: 133 TDLGQTHDCVPFTEAKALACKSNIPYVENSAKELKGLEDV 172
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 33.9 bits (74), Expect = 0.052
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 115 EAMVLSVVGNKSDLESLRAVPYNEATQYAATIGAAYCETSAL 240
+A+ + V+GNKSDL R V +E + A T G + E SAL
Sbjct: 138 DAISVLVIGNKSDLIGERDVTRDEGQRLAETYGWLFAEASAL 179
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 33.5 bits (73), Expect = 0.069
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +2
Query: 254 SKKCSRIPRYHCCNCPPVTSSPRCGPMIQQKRKLQQPAQPMTARPTPP 397
S C R Y C PP T PR + K P T+RP PP
Sbjct: 1637 SSICLRAEIYGCPVTPPTTDPPRPPVTVTPKPSTDAPLPASTSRPQPP 1684
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 33.5 bits (73), Expect = 0.069
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +1
Query: 13 YRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEAT 192
Y+ + L++ DIT +FT ++ +EL P VL V+ N+ D+E R V E T
Sbjct: 278 YKGTHGVLMLLDITKPWTFTYVR---RELPKVPPHIPVL-VLANRRDMEEHRLVDAEEIT 333
Query: 193 QY 198
+
Sbjct: 334 SF 335
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 32.7 bits (71), Expect = 0.12
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 7 MYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVP----EAMVLSVVGNKSDL 156
+YY+ A+A +++FD+ + W K+L S + + +VGNKSDL
Sbjct: 87 VYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVGNKSDL 140
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLR 168
+Y N+ L+V+ + S +K + Q N P A ++ +V NK DL + R
Sbjct: 19 HYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAAKIV-LVANKMDLPNYR 70
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLR 168
+Y N+ L+V+ + S +K + Q N P A ++ +V NK DL + R
Sbjct: 78 HYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAAKIV-LVANKMDLPNYR 129
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 32.3 bits (70), Expect = 0.16
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 7 MYYRNANAALLVFDITSMQSFTAIKGWVKEL 99
++Y N +LV D+T+ +SFT ++ W+ E+
Sbjct: 79 IFYNGINGLILVHDLTNRKSFTNLRKWLAEV 109
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 31.9 bits (69), Expect = 0.21
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAI-KGWVKELQSNVPEAMVLSVVGNKSDLES 162
P+ Y N + L+ FDI+ ++ +I + W+ E+ P VL +VG K DL S
Sbjct: 298 PLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVL-LVGCKQDLRS 350
>SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52)
Length = 516
Score = 29.9 bits (64), Expect = 0.85
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 254 SKKCSRIPRYHCCNCPPVTSSPRC-GPMIQQKRKLQQPAQPMTARPTPPKWS 406
+++C + P + P++ P P + K + P+ +T PTPP WS
Sbjct: 47 AEECPKTPSEPSDSPGPMSPEPEIMTPTPEPSPKHRSPSPKLTKTPTPPSWS 98
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 29.9 bits (64), Expect = 0.85
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKG-WVKELQSNVPEAMVLSVVGNKSDL 156
Y R A+AA++ +DIT S + + LQ+ P +V+ +VG K DL
Sbjct: 292 YCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVV-IVGCKKDL 340
>SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05)
Length = 288
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Frame = +2
Query: 275 PRYHCCNCPPVTSSPRCGPMIQQKRKLQQPA------QPMTARPTPPK 400
P+ H NC +T PR GP+ P P+T +P PP+
Sbjct: 192 PQEHFVNCADITIKPRSGPLPPTAAPPPPPTTGAPPPTPVTNKPPPPR 239
>SB_39298| Best HMM Match : Ras (HMM E-Value=0.11)
Length = 64
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 16 RNANAALLVFDITSMQSF-TAIKGWVKELQSNVPEAMVLSVVGNKSDLESLR 168
R A+A ++V+ IT SF TA++ + + +++VGNK+DLE R
Sbjct: 11 RWADAFIVVYSITDKNSFNTAVQLVEAVYYGKGTDEVHVALVGNKTDLEHFR 62
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIK 81
YYR A +L++DIT+ +SF A++
Sbjct: 90 YYRGAMGFILMYDITNEESFQAVQ 113
>SB_22875| Best HMM Match : Transposase_8 (HMM E-Value=0.86)
Length = 649
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -1
Query: 343 LLNHRTAARRRGYWRTVAAVISRYS*TLFR-CPDRAARTFRSKRPRW--WRH 197
L+ +R +RR W + A + Y+ + R PD R K PR+ WRH
Sbjct: 195 LIQYRD-GKRRSQWYHIRAFMLAYTNIVLRMVPDEVQRRLVEKSPRYGEWRH 245
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 28.3 bits (60), Expect = 2.6
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 215 PLTAKR--PRCTIRASKKCSRIPRYHCCNCPPVT--SSPRCGPMIQQKRKLQQPAQPMTA 382
P+TA+ P T S C + + CPPVT SS C P+ + P +
Sbjct: 549 PVTAQCHVPPVTEHDSVPCPPVTEHDSVPCPPVTEHSSVPCPPVTEHDSVPCPPVTEHDS 608
Query: 383 RPTPP 397
P PP
Sbjct: 609 VPCPP 613
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 97 LQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYAATIGAAYCETSALHDQGIEKVFK 270
+Q N + +VGNK L+ R V E A +G + ETSA + + F+
Sbjct: 1 MQHNCEQEAKAVLVGNKCHLDCEREVSVAEGRGLAKELGLPFFETSAEKNINVTDCFE 58
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 151 DLESLRAVPYNEATQYAATIGAAYCETSALHDQGIEKVFKNTAI 282
DL S R + E ++A Y ETS+ + QG+ ++F + +
Sbjct: 39 DLISRRVISSKEGQKWARAQDLKYYETSSANGQGVYEMFNDLLV 82
>SB_12099| Best HMM Match : DUF1220 (HMM E-Value=4.3)
Length = 713
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 299 PPVTSSPRCGPMIQQKRKLQQPAQPMTARPTPPK 400
PP PR +I+QK+K +QP +P P PP+
Sbjct: 408 PPPIEIPRW-KLIRQKKK-KQPIEPPITPPEPPR 439
>SB_48897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 27.1 bits (57), Expect = 6.0
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +2
Query: 284 HCCNCPPVTSSPRCGPMIQQKRKLQQPAQPMTARPTPPKWS 406
H C P SP C P P P+ PP+WS
Sbjct: 36 HLSPCTPPLLSP-CTPPHLSPSNSCSPGDPLVLERPPPRWS 75
>SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10)
Length = 1272
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 212 GPLTAKRPRCTIRASKKCSRIPRYHCCNCPPVTSSPRCGPMIQQKRKLQQPAQPMTARP 388
G LT + R +RA + P + PP SP C P + + P+T P
Sbjct: 1124 GRLTKRNSR-VLRAYAPATPSPDHQYRTPPPPPRSPECQPTLNSSPSPRTYRGPLTGNP 1181
>SB_42739| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-21)
Length = 683
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 130 SVVGNKSDLESLRAVPYNEATQYAATIGAAYCE 228
SVVGN ++S+ ++PY + Y T A E
Sbjct: 48 SVVGNAIIIKSVISIPYKKPLTYTLTTNLAIAE 80
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.124 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,945,062
Number of Sequences: 59808
Number of extensions: 288881
Number of successful extensions: 2353
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 2274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2343
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 752487277
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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