Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1299
         (412 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            82   9e-18
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   0.81 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   0.81 
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       25   1.4  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   3.3  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    23   4.3  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   4.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   5.7  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   5.7  
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    23   5.7  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   5.7  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       22   7.6  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    22   7.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    22   7.6  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 81.8 bits (193), Expect = 9e-18
 Identities = 40/89 (44%), Positives = 53/89 (59%)
 Frame = +1

Query: 1   APMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPY 180
           APMYYR A AA++V+DI +  SF   K WVKELQ      +V+++ GNK+DL + R V Y
Sbjct: 90  APMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDY 149

Query: 181 NEATQYAATIGAAYCETSALHDQGIEKVF 267
            EA QYA      + ETSA     +  +F
Sbjct: 150 EEAKQYADDNRLLFMETSAKTAVNVNDIF 178


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 10/45 (22%), Positives = 24/45 (53%)
 Frame = +1

Query: 88  VKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYAATIGAAY 222
           V  +  N+   + L VVG    + +++ + Y EA++ + ++G  +
Sbjct: 422 VNPMNGNLEFGIPLLVVGKLFGMSTVKFITYQEASEISGSMGVGW 466


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 10/45 (22%), Positives = 24/45 (53%)
 Frame = +1

Query: 88  VKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYAATIGAAY 222
           V  +  N+   + L VVG    + +++ + Y EA++ + ++G  +
Sbjct: 423 VNPMNGNLEFGIPLLVVGKLFGMSTVKFITYQEASEISGSMGVGW 467


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 282 YRGILEHFFDALIVQRGRFAVSGPDG 205
           +RG+ E  F  +  +  RF  +GP+G
Sbjct: 120 FRGLWEEAFQPMATRNRRFFPNGPEG 145


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 409 AAPLWRCGSRGHRLC 365
           + PLWR    GH LC
Sbjct: 127 STPLWRRDGTGHYLC 141


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 336 FNRRENCNSQHN 371
           FN  ENCN  H+
Sbjct: 617 FNENENCNDSHS 628


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +2

Query: 251 ASKKCSRIPRYHCCNCPPVTSSPRCGPMIQQKRKLQQPAQPMTARPTPPK 400
           A+ +  ++P +     P   S    GP++Q   KLQ  A   +    PP+
Sbjct: 204 ANLQVQKVPAFQAM--PESVSRISTGPVVQVDNKLQPSAIKNSIMSIPPR 251


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 409 AAPLWRCGSRGHRLCWLLQF 350
           A PL   G    RLCW L +
Sbjct: 191 AGPLHGAGCTPERLCWELHY 210


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 266 SRIPRYHCCNCPPVTSSPRCGPMIQQKRKLQQPAQPMT 379
           SR+ +    + PP+T +  CG +    ++ QQ   P T
Sbjct: 453 SRVIQRTPSSSPPLTPNTICGLIAPPPQQQQQDPTPQT 490


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +2

Query: 296 CPPVTSSPRCGPMI 337
           CP   + P CGP +
Sbjct: 83  CPAFVNEPNCGPSV 96


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 219 LLRNVRAARSGHRKSVQEYRDITAATVL 302
           L +NV   RSG RK ++   D T +  L
Sbjct: 634 LWKNVSIGRSGSRKLIEVVPDTTTSWYL 661


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 145 KSDLESLRAVPYNEATQYAATIGAAYCETSA 237
           +SDL  + AVP     Q+A   G A  E  A
Sbjct: 404 QSDLSGMVAVPPLSVEQFATRFGLADTERPA 434


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 14/51 (27%), Positives = 17/51 (33%)
 Frame = -1

Query: 259 FRCPDRAARTFRSKRPRWWRHTASPHCRGPLSGIPDRFYCRQRTTPSPLEH 107
           FR PD        K+ +        H   P  G       +QRT   P EH
Sbjct: 460 FRGPDSGTDRHSEKQQQQQSQHQQQHQHQPGGGPLPAQSAKQRTKSKPAEH 510


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 14/51 (27%), Positives = 17/51 (33%)
 Frame = -1

Query: 259 FRCPDRAARTFRSKRPRWWRHTASPHCRGPLSGIPDRFYCRQRTTPSPLEH 107
           FR PD        K+ +        H   P  G       +QRT   P EH
Sbjct: 460 FRGPDSGTDRHSEKQQQQQSQHQQQHQHQPGGGPLPAQSAKQRTKSKPAEH 510


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.124    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,162
Number of Sequences: 2352
Number of extensions: 9741
Number of successful extensions: 27
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)