Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1299
(412 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 85 1e-17
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 81 3e-16
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 80 7e-16
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 74 4e-14
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 73 1e-13
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 72 2e-13
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 69 1e-12
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 69 1e-12
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 66 9e-12
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 66 9e-12
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 64 5e-11
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 64 5e-11
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 63 9e-11
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 62 1e-10
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 62 1e-10
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 62 2e-10
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 62 2e-10
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 62 2e-10
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 62 2e-10
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 62 2e-10
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 62 2e-10
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 62 2e-10
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 61 3e-10
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 61 3e-10
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 61 4e-10
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 59 1e-09
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 58 2e-09
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 58 3e-09
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 57 4e-09
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 56 8e-09
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 55 2e-08
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 54 4e-08
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 52 2e-07
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 51 4e-07
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 51 4e-07
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 46 8e-06
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 46 8e-06
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 45 2e-05
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 45 2e-05
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 45 2e-05
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 45 2e-05
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 44 4e-05
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 44 6e-05
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 43 1e-04
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 42 1e-04
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 42 2e-04
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 42 2e-04
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 42 2e-04
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 42 2e-04
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 42 2e-04
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 41 4e-04
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 41 4e-04
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 41 4e-04
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 40 5e-04
U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical pr... 40 7e-04
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 38 0.003
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 36 0.011
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 36 0.011
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 35 0.026
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 33 0.061
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 33 0.081
Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical pr... 30 0.75
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 30 0.75
AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (... 29 1.7
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 2.3
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 2.3
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 28 3.0
AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribo... 27 4.0
AC024200-15|AAF36011.1| 945|Caenorhabditis elegans Poly(adp-rib... 27 4.0
Z99286-3|CAH60794.1| 320|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical p... 27 7.0
Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical p... 27 7.0
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 27 7.0
U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical pr... 27 7.0
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 27 7.0
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 27 7.0
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 27 7.0
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 7.0
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 7.0
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 27 7.0
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 27 7.0
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 27 7.0
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 27 7.0
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 27 7.0
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 27 7.0
Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical p... 26 9.2
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 26 9.2
U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in bl... 26 9.2
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 26 9.2
AC025722-7|AAK68510.1| 540|Caenorhabditis elegans Hypothetical ... 26 9.2
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 85.4 bits (202), Expect = 1e-17
Identities = 39/89 (43%), Positives = 54/89 (60%)
Frame = +1
Query: 1 APMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPY 180
APMYYR A AA++V+DIT+ +SF K WVKELQ +V+++ GNK+D+ + R V Y
Sbjct: 85 APMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEY 144
Query: 181 NEATQYAATIGAAYCETSALHDQGIEKVF 267
EA YA + ETSA + +F
Sbjct: 145 EEANAYAEDNALLFMETSAKTSMNVNDIF 173
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 82.6 bits (195), Expect = 1e-16
Identities = 40/90 (44%), Positives = 55/90 (61%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYN 183
P+YYR +N LLVFDIT +SF +K WV E+++ + + +VGNK DLE R V
Sbjct: 79 PIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQ 138
Query: 184 EATQYAATIGAAYCETSALHDQGIEKVFKN 273
+A YA + GA Y ETSA + GI F++
Sbjct: 139 DAEAYAESEGALYMETSAQDNVGISDAFES 168
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 81.0 bits (191), Expect = 3e-16
Identities = 39/90 (43%), Positives = 58/90 (64%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYRNA ALLV+DIT +SF ++ W+ +L+ + MV+ ++GNKSDL+++R V E
Sbjct: 75 YYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEEG 134
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+A G + ETSA ++ +EK F NTA
Sbjct: 135 EAFAKKNGLTFMETSAKANKHVEKAFVNTA 164
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 79.8 bits (188), Expect = 7e-16
Identities = 39/88 (44%), Positives = 55/88 (62%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A ALLV+DI ++ ++ W+KEL+ + + +V+ +VGNKSDL LRAVP +EA
Sbjct: 80 YYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEA 139
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKN 273
YA ++ ETSAL +E F N
Sbjct: 140 KIYAERNQLSFIETSALDSTNVEAAFTN 167
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 74.1 bits (174), Expect = 4e-14
Identities = 38/91 (41%), Positives = 58/91 (63%)
Frame = +1
Query: 1 APMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPY 180
A YYR A ALLV+DI+ +++ +++ W+K L+ + E +V+++VGNKSDL AVP
Sbjct: 74 ASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS--HAVPT 131
Query: 181 NEATQYAATIGAAYCETSALHDQGIEKVFKN 273
+EA YA ++ ETSAL + +E F N
Sbjct: 132 DEAKIYAERNHISFIETSALDNTNVEAAFTN 162
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 72.5 bits (170), Expect = 1e-13
Identities = 37/90 (41%), Positives = 56/90 (62%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR+A ALLV+DITS +SF ++ W+ +LQ +V+ ++GNKSDLE+ R V E
Sbjct: 75 YYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEEG 134
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+A G + E SA ++ +E+ F N+A
Sbjct: 135 EAFAREFGLIFMEISAKTNEYVEEAFVNSA 164
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 71.7 bits (168), Expect = 2e-13
Identities = 35/90 (38%), Positives = 52/90 (57%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A ALLV+DIT +F + W+++ + + MV+ ++GNKSDLE+ R V E
Sbjct: 75 YYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVKREEG 134
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+A G + ETSA +E+ F +TA
Sbjct: 135 EAFAREHGLVFMETSAKTAANVEEAFIDTA 164
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 69.3 bits (162), Expect = 1e-12
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A AL+V+DIT ++ + W+ + +S + ++GNK+DLE R VPY EA
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPYEEA 139
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+A G + E SA +E F TA
Sbjct: 140 KAFAEENGLTFLECSAKTGSNVEDAFLETA 169
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 68.9 bits (161), Expect = 1e-12
Identities = 33/90 (36%), Positives = 50/90 (55%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A+ ++V+DIT ++F +K W++E+ E + +VGNK DL + RAV A
Sbjct: 80 YYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVETQAA 139
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTA 279
YA +G + ETSA +E+ F A
Sbjct: 140 QDYAGQLGIPFLETSAKSSTNVEQAFLTMA 169
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 66.1 bits (154), Expect = 9e-12
Identities = 30/86 (34%), Positives = 48/86 (55%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A +LV+DIT+ +SF IK W++ ++ + + ++GNK D+E R V +
Sbjct: 77 YYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRG 136
Query: 190 TQYAATIGAAYCETSALHDQGIEKVF 267
Q A G + ETSA + I++ F
Sbjct: 137 EQLAIEYGTKFLETSAKANLNIDEAF 162
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 66.1 bits (154), Expect = 9e-12
Identities = 30/86 (34%), Positives = 48/86 (55%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A +LV+DIT+ +SF IK W++ ++ + + ++GNK D+E R V +
Sbjct: 77 YYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRG 136
Query: 190 TQYAATIGAAYCETSALHDQGIEKVF 267
Q A G + ETSA + I++ F
Sbjct: 137 EQLAIEYGTKFLETSAKANLNIDEAF 162
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 63.7 bits (148), Expect = 5e-11
Identities = 28/86 (32%), Positives = 55/86 (63%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR + ++V+D+T+ +SF +K W++E+++N +++ +VGNK + R V ++A
Sbjct: 79 YYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNC-DSVQKVLVGNKCEENERRVVLESDA 137
Query: 190 TQYAATIGAAYCETSALHDQGIEKVF 267
YA ++ ++ ETSA D+ +E +F
Sbjct: 138 RNYAQSMNISFFETSAKEDKNVEPMF 163
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 63.7 bits (148), Expect = 5e-11
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDL---ESLRAVPY 180
Y+R A+ +L+FD+TS QSF ++ W+ +++ V +A V+ +VGNK DL + R+ Y
Sbjct: 272 YFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDLFGSDIARSAVY 331
Query: 181 NEATQYAATIGAAYCETSALHDQGIEKVFKNTA 279
A + A + ETSA GI+ + A
Sbjct: 332 RAAEKLAVEFKIPFFETSAYTGFGIDTCMRQMA 364
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 62.9 bits (146), Expect = 9e-11
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAI-KGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNE 186
YY +A+ + V+D+T+ +SF + K W+KE++ + P VL +VGNK+D++ R V ++
Sbjct: 75 YYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDR 134
Query: 187 ATQYAATIGAAYCETSALHDQGIEKVF 267
A + A+ +G + E SA E+ F
Sbjct: 135 AEKLASRLGVSLYEVSAKTGINCEEAF 161
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 62.5 bits (145), Expect = 1e-10
Identities = 33/90 (36%), Positives = 52/90 (57%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR+A+A LLV+DI + SF + W+ +++ EA+ +++VGNK DL RAVP +E
Sbjct: 72 YYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEG 129
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+ A + ETSA +++ F A
Sbjct: 130 KRLAEAYQIPFMETSAKTGFNVDRAFLGLA 159
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 62.5 bits (145), Expect = 1e-10
Identities = 33/90 (36%), Positives = 52/90 (57%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR+A+A LLV+DI + SF + W+ +++ EA+ +++VGNK DL RAVP +E
Sbjct: 72 YYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEG 129
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+ A + ETSA +++ F A
Sbjct: 130 KRLAEAYQIPFMETSAKTGFNVDRAFLGLA 159
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/87 (33%), Positives = 52/87 (59%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A +L++DIT+ +SF +++ W ++++ E + +VGNK D++S R V +
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRG 150
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFK 270
Q A +G + ETSA + ++ VF+
Sbjct: 151 RQLADQLGLEFFETSAKENINVKAVFE 177
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/87 (33%), Positives = 52/87 (59%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A +L++DIT+ +SF +++ W ++++ E + +VGNK D++S R V +
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRG 150
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFK 270
Q A +G + ETSA + ++ VF+
Sbjct: 151 RQLADQLGLEFFETSAKENINVKAVFE 177
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/87 (33%), Positives = 52/87 (59%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A +L++DIT+ +SF +++ W ++++ E + +VGNK D++S R V +
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRG 150
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFK 270
Q A +G + ETSA + ++ VF+
Sbjct: 151 RQLADQLGLEFFETSAKENINVKAVFE 177
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/87 (33%), Positives = 52/87 (59%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A +L++DIT+ +SF +++ W ++++ E + +VGNK D++S R V +
Sbjct: 105 YYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRG 164
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFK 270
Q A +G + ETSA + ++ VF+
Sbjct: 165 RQLADQLGLEFFETSAKENINVKAVFE 191
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 62.1 bits (144), Expect = 2e-10
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVP-EAMVLSVVGNKSDLESLRAVPYNE 186
++R+A +L+FDIT+ QSF I+ W+ +L+ + E + + GNK+DLE+ R V
Sbjct: 85 FFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTAR 144
Query: 187 ATQYAATIGAAYCETSALHDQGIEK 261
A Q A +G Y ETSA +EK
Sbjct: 145 AKQLADQLGLPYFETSACTSTNVEK 169
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 62.1 bits (144), Expect = 2e-10
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVP-EAMVLSVVGNKSDLESLRAVPYNE 186
++R+A +L+FDIT+ QSF I+ W+ +L+ + E + + GNK+DLE+ R V
Sbjct: 85 FFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTAR 144
Query: 187 ATQYAATIGAAYCETSALHDQGIEK 261
A Q A +G Y ETSA +EK
Sbjct: 145 AKQLADQLGLPYFETSACTSTNVEK 169
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/87 (33%), Positives = 52/87 (59%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A +L++DIT+ +SF +++ W ++++ E + +VGNK D++S R V +
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRG 150
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFK 270
Q A +G + ETSA + ++ VF+
Sbjct: 151 RQLADQLGLEFFETSAKENINVKAVFE 177
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 61.3 bits (142), Expect = 3e-10
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNV----PEAMVLSVVGNKSDLESLRAVP 177
YYRN+ L ++D T+ +SF ++ WVKE N+ P V +VG KSD++S R V
Sbjct: 87 YYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQRQVN 146
Query: 178 YNEATQYAATIGAAYCETSALHDQGIEKVF 267
Y E +A + ETS+ + + F
Sbjct: 147 YEEGEYFAKYHKMKFIETSSRTGDNVNEAF 176
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 61.3 bits (142), Expect = 3e-10
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKGWVKEL-QSNVPEAMVLSVVGNKSDLESLRAVPY 180
PMY RNA+AAL+V+D+T +F ++ W+K+L +S+ E + ++GNK+DL R V
Sbjct: 123 PMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVEKREVTE 182
Query: 181 NEATQYAATIGAAYCETS 234
E AA I A + E S
Sbjct: 183 AEGKAMAAKINAKFFELS 200
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 60.9 bits (141), Expect = 4e-10
Identities = 27/92 (29%), Positives = 52/92 (56%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYN 183
P Y R++ A++V+DIT+ SF W+ ++++ +++ +VGNK+DL R V +
Sbjct: 77 PSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTD 136
Query: 184 EATQYAATIGAAYCETSALHDQGIEKVFKNTA 279
E + A + + ETSA ++++F+ A
Sbjct: 137 EGERKAKELNVMFIETSAKAGYNVKQLFRRIA 168
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 58.8 bits (136), Expect = 1e-09
Identities = 29/90 (32%), Positives = 48/90 (53%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A +LV+DIT+ +SF I W++ + + E +V ++GNK D+ R V
Sbjct: 78 YYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERG 137
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+ A G ++ ETSA + ++ F + A
Sbjct: 138 EKIAQDHGISFHETSAKLNVHVDTAFYDLA 167
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 58.0 bits (134), Expect = 2e-09
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSD--LESLRAVPYN 183
Y+R A+ A+LV+D+ + QSF ++ W++ ++ + ++ + +VGNK D + + +V
Sbjct: 530 YFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMRISTPGSVAKT 589
Query: 184 EATQYAATIGAAYCETSALHDQGIE 258
+ AA +G + ETSAL I+
Sbjct: 590 DGASMAAAMGVLFMETSALDGSNID 614
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 57.6 bits (133), Expect = 3e-09
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR+AN +L +DIT QSF +++ W+ ++ +V ++G K DLE RA+ EA
Sbjct: 79 YYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIEAEEA 138
Query: 190 TQYAATIGA-AYCETSALHDQGIEKVFKNTA 279
G A ETSA + ++ F A
Sbjct: 139 EMLQRANGMFAMLETSAKGNVNVDNAFLELA 169
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 57.2 bits (132), Expect = 4e-09
Identities = 27/92 (29%), Positives = 52/92 (56%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYN 183
P Y R+++ A++V+DIT+ SF WV ++++ +++ +VGNK+DL R V
Sbjct: 78 PSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTE 137
Query: 184 EATQYAATIGAAYCETSALHDQGIEKVFKNTA 279
+ + A + + ETSA ++++F+ A
Sbjct: 138 DGEKKARDLNVMFIETSAKAGYNVKQLFRKIA 169
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 56.4 bits (130), Expect = 8e-09
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR A +LVF + +F +K ++ + + + + +VGNKSDL R V +EA
Sbjct: 71 YYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVDESEA 130
Query: 190 TQYAATIGAAYCETSALHDQGIEKVFKNTAI 282
+A + Y ETSA +Q + +VF+ A+
Sbjct: 131 HNFAEKLKIPYFETSARLNQNVSEVFEECAV 161
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 55.2 bits (127), Expect = 2e-08
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSN--VPEAMVLSV-VGNKSDLESLRAVPY 180
YYRN NA + V+D+T +SF + W+KE + + V ++ V + +GNK D+E V
Sbjct: 170 YYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDVECTNRVST 229
Query: 181 NEATQYAATIGAAYCETSA 237
+EA +A A ETSA
Sbjct: 230 DEAQMFADRNNMALFETSA 248
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 54.0 bits (124), Expect = 4e-08
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEA 189
YYR+A+A +LV+D++ SF + W+ E++S ++ +VGNK D R VP
Sbjct: 76 YYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIG 135
Query: 190 TQYAATIGAAY-CETSALHDQGIEKVFKNTA 279
++ Y ETSAL ++++F+ A
Sbjct: 136 RDFSDVNQFDYFLETSALDATNVDQLFEQVA 166
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 52.0 bits (119), Expect = 2e-07
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKE--LQSNV--PEAMVLSVVGNKSDLESLRAVP 177
+YR A+ +L FD+T+ SF ++ W E +Q++ P+ ++GNK DLES RAV
Sbjct: 78 FYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDLESQRAVS 137
Query: 178 YNEATQYAATIG-AAYCETSALHDQGIEKVF 267
A + T G Y E SA +E F
Sbjct: 138 SKRAQSWCQTKGNIPYYEVSAKEALNVEAAF 168
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 51.6 bits (118), Expect = 2e-07
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQ--SNVPEAMVLSVVGNKSDLESLRAVPYN 183
YYR+ + VF I M+SF A + +++ N ++ + +VGNK D+ R V
Sbjct: 85 YYRSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGDMRDQRVVSAE 144
Query: 184 EATQYAATIGAAYCETSALHDQGIEKVF 267
Q A G Y ETSA + ++KVF
Sbjct: 145 LCRQRAEQWGCHYVETSAKRRENVDKVF 172
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 50.8 bits (116), Expect = 4e-07
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 25 NAALLVFDITSMQSFTA---IKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQ 195
NA +L++ +T+ QSF I +KE++ N + +VGNK D ES R V N +
Sbjct: 10 NAFILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSGQK 69
Query: 196 YAATIGAAYCETSALHDQGIEKVFK 270
A + + ETSA +++ I ++F+
Sbjct: 70 VATNMECGFIETSAKNNENITELFQ 94
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 50.8 bits (116), Expect = 4e-07
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKGWVKELQSN-VPEAMVLSVVGNKSDLESLRAVPY 180
P YYR A + V+D+TS SF + W++E+ + + ++ +V NK D+ + R V
Sbjct: 78 PSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMPN-RVVTR 136
Query: 181 NEATQYAATIGAAYCETSALHDQGIEKVFK 270
E ++A + E SA +G++ F+
Sbjct: 137 EEGLKFAKRHRTLFIEASAKTKEGVQCTFE 166
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 46.4 bits (105), Expect = 8e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSD 153
YYR A ALLV+DI ++ ++ W+KEL+ + + +V+ VGNK D
Sbjct: 80 YYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 46.4 bits (105), Expect = 8e-06
Identities = 30/93 (32%), Positives = 42/93 (45%)
Frame = +1
Query: 1 APMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPY 180
AP Y R+A ALLV D++ + W + N + +VGNK DL S + P
Sbjct: 73 APAYIRSARVALLVIDLSDENCVEHLIRWKGIIDKNKSDFTSTIIVGNKHDLVSEKRSP- 131
Query: 181 NEATQYAATIGAAYCETSALHDQGIEKVFKNTA 279
T Y ETSA + I+K+F + A
Sbjct: 132 -RLTAIIRETNDEYIETSAKMRKNIKKLFSSVA 163
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 45.6 bits (103), Expect = 1e-05
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 7 MYYRNANAALLVFDITSMQSFTAIKGWVKE-LQSNVPEAMVLSVVGNKSDLESLRAVPYN 183
+Y +N +LV+ IT+ +F + + L+ + + + +VGNK DLE R V +
Sbjct: 70 LYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDLEDERVVGKD 129
Query: 184 EATQYAATIGAAYCETSALHDQGIEKVF 267
+ A G+A+ ETSA + +VF
Sbjct: 130 QGQNLARQFGSAFLETSAKAKINVSEVF 157
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 45.2 bits (102), Expect = 2e-05
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEA--MVLSVVGNKSDLESLRAVPYN 183
Y R + L+VF +T SF +K + EL + + + +VGNK+DLE+ R V +
Sbjct: 85 YLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVARH 143
Query: 184 EATQYAATIGAAYCETSALHDQGIEKVF 267
EA + A + Y E SA + +++ F
Sbjct: 144 EAEELAHRLSIPYLECSAKIRKNVDEAF 171
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 45.2 bits (102), Expect = 2e-05
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEA--MVLSVVGNKSDLESLRAVPYN 183
Y R + L+VF +T SF +K + EL + + + +VGNK+DLE+ R V +
Sbjct: 85 YLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVARH 143
Query: 184 EATQYAATIGAAYCETSALHDQGIEKVF 267
EA + A + Y E SA + +++ F
Sbjct: 144 EAEELAHRLSIPYLECSAKIRKNVDEAF 171
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 45.2 bits (102), Expect = 2e-05
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEA--MVLSVVGNKSDLESLRAVPYN 183
Y R + L+VF +T SF +K + EL + + + +VGNK+DLE+ R V +
Sbjct: 85 YLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVARH 143
Query: 184 EATQYAATIGAAYCETSALHDQGIEKVF 267
EA + A + Y E SA + +++ F
Sbjct: 144 EAEELAHRLSIPYLECSAKIRKNVDEAF 171
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 44.8 bits (101), Expect = 2e-05
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNK 147
YYR A +LV+DIT+ +SF IK W++ ++ + + ++GNK
Sbjct: 77 YYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNK 147
YYR A +LV+DIT+ +SF I W++ + + E +V ++GNK
Sbjct: 78 YYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNK 123
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 43.6 bits (98), Expect = 6e-05
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 7 MYYRNANAALLVFDITSMQSFTAIKGWVKEL-QSNVPEAMVLSVVGNKSDLESLRAVPYN 183
+Y +N ++V+ ITS Q+F I+ +++ + E + + +VGNK DL R V
Sbjct: 70 LYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCDLSHQRQVRSE 129
Query: 184 EATQYAATIGAAYCETSALHDQGIEKVF 267
E A + + E SA ++Q + F
Sbjct: 130 EGLALAESWSCPFTECSAKNNQNVNVTF 157
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 42.7 bits (96), Expect = 1e-04
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Frame = +1
Query: 22 ANAALLVFDITSMQSFTAIKGWVKELQSN----VPEAMVLSVVGNKSDLESLRAVPYNEA 189
A+ ++V+D+TS SF +G ++ + + P +VGNK+DLE R V E
Sbjct: 79 ADVYVVVYDVTSQLSFQYAEGILERISRHEHVLCPREHRTLLVGNKTDLERYRQVSETEG 138
Query: 190 TQYAATIGAAYCETSALHD-----QGIEKVFKN 273
+ A+ A + E SA D QG+ +F+N
Sbjct: 139 ERLASQHKAQFAECSAAIDLRQFTQGLHSIFQN 171
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 42.3 bits (95), Expect = 1e-04
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKGWVKELQS-----NVPEAMV------------LS 132
P YYR A + V+D+TS SF + W++E+ + N+ + MV S
Sbjct: 51 PSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMVRKSRFCS 110
Query: 133 VVGNKSDLESLRAVPYNEATQYAATIGAAYCETSALHDQGIEKVFK 270
+ G K++ + R V E ++A + E SA +G++ F+
Sbjct: 111 IFGLKNNFQPNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFE 156
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +1
Query: 25 NAALLVFDITSMQSFTAIKGWVKELQS--NVPEAMVLSVVGNKSDLESLRA--VPYNEAT 192
+A + VF++ S+QS+ +I+ E+ N+ + + L +VG K + RA + +E
Sbjct: 98 DAVVFVFNVCSIQSYDSIQALAHEMSKYRNISD-LPLILVGTKDHISEKRARVITEDEGR 156
Query: 193 QYAATIG-AAYCETSALHDQGIEKVFK 270
Q AA + +Y ETS+ + +E+VFK
Sbjct: 157 QLAAQMKRCSYFETSSTYGTNVERVFK 183
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +1
Query: 25 NAALLVFDITSMQSFTAIKGWVKELQS--NVPEAMVLSVVGNKSDLESLRA--VPYNEAT 192
+A + VF++ S+QS+ +I+ E+ N+ + + L +VG K + RA + +E
Sbjct: 146 DAVVFVFNVCSIQSYDSIQALAHEMSKYRNISD-LPLILVGTKDHISEKRARVITEDEGR 204
Query: 193 QYAATIG-AAYCETSALHDQGIEKVFK 270
Q AA + +Y ETS+ + +E+VFK
Sbjct: 205 QLAAQMKRCSYFETSSTYGTNVERVFK 231
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +1
Query: 25 NAALLVFDITSMQSFTAIKGWVKELQS--NVPEAMVLSVVGNKSDLESLRA--VPYNEAT 192
+A + VF++ S+QS+ +I+ E+ N+ + + L +VG K + RA + +E
Sbjct: 302 DAVVFVFNVCSIQSYDSIQALAHEMSKYRNISD-LPLILVGTKDHISEKRARVITEDEGR 360
Query: 193 QYAATIG-AAYCETSALHDQGIEKVFK 270
Q AA + +Y ETS+ + +E+VFK
Sbjct: 361 QLAAQMKRCSYFETSSTYGTNVERVFK 387
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +1
Query: 25 NAALLVFDITSMQSFTAIKGWVKELQS--NVPEAMVLSVVGNKSDLESLRA--VPYNEAT 192
+A + VF++ S+QS+ +I+ E+ N+ + + L +VG K + RA + +E
Sbjct: 302 DAVVFVFNVCSIQSYDSIQALAHEMSKYRNISD-LPLILVGTKDHISEKRARVITEDEGR 360
Query: 193 QYAATIG-AAYCETSALHDQGIEKVFK 270
Q AA + +Y ETS+ + +E+VFK
Sbjct: 361 QLAAQMKRCSYFETSSTYGTNVERVFK 387
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +1
Query: 25 NAALLVFDITSMQSFTAIKGWVKELQS--NVPEAMVLSVVGNKSDLESLRA--VPYNEAT 192
+A + VF++ S+QS+ +I+ E+ N+ + + L +VG K + RA + +E
Sbjct: 146 DAVVFVFNVCSIQSYDSIQALAHEMSKYRNISD-LPLILVGTKDHISEKRARVITEDEGR 204
Query: 193 QYAATIG-AAYCETSALHDQGIEKVFK 270
Q AA + +Y ETS+ + +E+VFK
Sbjct: 205 QLAAQMKRCSYFETSSTYGTNVERVFK 231
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 40.7 bits (91), Expect = 4e-04
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKG-WVKELQSNVPEAMVLSVVGNKSDL----ESLR 168
P+ Y + +L F + S SF + W+ E++ + P+A V+ +VG K DL E +R
Sbjct: 73 PLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVI-LVGTKLDLRDEAEPMR 131
Query: 169 AVPYNEATQYAATIG---------AAYCETSALHDQGIEKVFKN 273
A+ + + T G Y E SAL QG+ +VF++
Sbjct: 132 ALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFED 175
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 40.7 bits (91), Expect = 4e-04
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Frame = +1
Query: 4 PMYYRNANAALLVFDITSMQSFTAIKG-WVKELQSNVPEAMVLSVVGNKSDL----ESLR 168
P+ Y + +L F + S SF + W+ E++ + P+A V+ +VG K DL E +R
Sbjct: 73 PLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVI-LVGTKLDLRDEAEPMR 131
Query: 169 AVPYNEATQYAATIG---------AAYCETSALHDQGIEKVFKN 273
A+ + + T G Y E SAL QG+ +VF++
Sbjct: 132 ALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFED 175
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 40.7 bits (91), Expect = 4e-04
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEA---MVLSVVGNKSDLESLRAVPY 180
Y AN LV+D+T+ +SF W+ ++ N + + L ++GNK+DLE R V
Sbjct: 105 YLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVVSV 164
Query: 181 NEATQYAAT 207
+A +
Sbjct: 165 EAHKNFATS 173
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 40.3 bits (90), Expect = 5e-04
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSN--VPEAMVLSV-VGNK 147
YYRN NA + V+D+T +SF + W+KE + + V ++ V + +GNK
Sbjct: 17 YYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNK 65
>U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical
protein C52B11.5 protein.
Length = 238
Score = 39.9 bits (89), Expect = 7e-04
Identities = 22/81 (27%), Positives = 43/81 (53%)
Frame = +1
Query: 16 RNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQ 195
R+ +A LL + ++SF +K + +Q +P ++VVG K+D++ ++ V + E
Sbjct: 96 RDVDAVLLFYAADDLESFKQLKENLVHVQRKIPPNANITVVGTKADVKEMQ-VQWQEVDS 154
Query: 196 YAATIGAAYCETSALHDQGIE 258
+A G + ETS+ +E
Sbjct: 155 FAENQGFSCFETSSKTGVNVE 175
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +1
Query: 22 ANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYA 201
+N ++++ + QSF K L+ + + +VG+K D+ R V E Q A
Sbjct: 289 SNGIIIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLA 348
Query: 202 ATIGAAYCETSALHDQGIEKVFK 270
T+G + E S+ + + + F+
Sbjct: 349 RTLGIPFLEVSSKQNDCVFEAFE 371
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 35.9 bits (79), Expect = 0.011
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 25 NAALLVFDITSMQSFTAIKGWVKELQSNVPEAMV-LSVVGNKSDLESLRAVPYNEATQYA 201
N +LV+ I +SF +++ + + + +VGNK+DL + R V E + A
Sbjct: 86 NGFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELA 145
Query: 202 ATIGAAYCETSALHDQGIEKVFK 270
A + E +A + +VF+
Sbjct: 146 RQWDAKFVEITARESNRVHEVFE 168
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 35.9 bits (79), Expect = 0.011
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +1
Query: 13 YRNANAALLVFDITSMQSFTAIKG-WVKELQSNVPEAMVLSVVGNKSDL----ESLRAVP 177
Y +AN L+ F + ++ + + W+ E++ + + + +VG K+DL +S V
Sbjct: 73 YPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKNDLVDDADSRNTVT 132
Query: 178 YNEATQYAATIGA-AYCETSALHDQGIEKVF 267
+ A + A IG + SAL +G+++VF
Sbjct: 133 EDYAKRVAHEIGCHKFYSCSALTHKGLKRVF 163
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 34.7 bits (76), Expect = 0.026
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 34 LLVFDITSMQSF---TAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYAA 204
++++++ + QSF T I + N P + L ++GNK DL+ + + NE A
Sbjct: 248 IVMYNMDNRQSFIYATQILERITLANLNNPVPLQLFLIGNKCDLKRNQVISTNEGKSVAR 307
Query: 205 TIGAAYCETSALHDQGIEKVF 267
T + E SAL E+ +
Sbjct: 308 TFKCDFLEVSALLGMNTEETW 328
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 33.5 bits (73), Expect = 0.061
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSN-VPEAMVLSVVGNKSDLESLRA 171
YY +ANA + V D T F + KE+ +N + + + + V NKS++E A
Sbjct: 89 YYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQNIPVLVAVNKSEMEGAAA 143
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 33.1 bits (72), Expect = 0.081
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 10 YYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEA--MVLSVVGNKSDLESLRAVPY 180
Y R + L+VF +T SF +K + EL + + + +VGNK+DLE+ R V +
Sbjct: 85 YLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVSF 142
>Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical
protein C34F6.9 protein.
Length = 1181
Score = 29.9 bits (64), Expect = 0.75
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +2
Query: 299 PPVTSSPRCGPMIQQKRKLQQPA----QPMTARPTPPK 400
PP+ + P+ ++Q K+ QPA P +P PPK
Sbjct: 519 PPIHTFPKTKKYVKQAAKIPQPAVLKEDPQAVKPRPPK 556
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 29.9 bits (64), Expect = 0.75
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 248 RASKKCSRIPRYHCCNCPPVTSSPRCGPMIQQK 346
RAS S PR CN P +P+C P+ +K
Sbjct: 283 RASSASSITPRASVCNSPSKDVTPKCSPLPARK 315
>AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (grd
related) protein13 protein.
Length = 273
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 296 CPPVTSSPRCGPMIQQKRKLQQPAQPMTARPTPP 397
CPP SP CG Q QP P++ RP PP
Sbjct: 46 CPP---SP-CGRQFQSFPSYTQPYSPVSFRPPPP 75
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 293 NCPPVTSSPRCGPMIQQKRKLQQPAQPMTARPTP 394
N PPV P QQ+R+ QQ +QP AR P
Sbjct: 527 NPPPVHQQPPPQQPPQQQRQKQQRSQPAPARVPP 560
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 293 NCPPVTSSPRCGPMIQQKRKLQQPAQPMTARPTP 394
N PPV P QQ+R+ QQ +QP AR P
Sbjct: 527 NPPPVHQQPPPQQPPQQQRQKQQRSQPAPARVPP 560
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 133 VVGNKSDLESLRAVPYNEATQYAATIGAAYCETSALHDQGIE 258
V GNK DLE R V E A +G + E S D ++
Sbjct: 343 VAGNKIDLERKRTVTKQEVRAAKAAMGFEHFEISVALDHDVD 384
>AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-1 protein.
Length = 945
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 344 KRKLQQPAQPMTARPTPPK 400
KR+ +PA P +A PTPP+
Sbjct: 194 KRRSTEPATPASASPTPPE 212
>AC024200-15|AAF36011.1| 945|Caenorhabditis elegans
Poly(adp-ribose) metabolism enzymeprotein 1 protein.
Length = 945
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 344 KRKLQQPAQPMTARPTPPK 400
KR+ +PA P +A PTPP+
Sbjct: 194 KRRSTEPATPASASPTPPE 212
>Z99286-3|CAH60794.1| 320|Caenorhabditis elegans Hypothetical
protein Y7A9C.9 protein.
Length = 320
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 49 ITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLE--SLRAVP 177
I Q F + K W L S V E ++ +VG++ +++ ++R +P
Sbjct: 136 IALFQKFMSKKVWYVHLVSVVKEITIICIVGSQMEIKRPNIRCIP 180
>Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 3 ADVLQKRQRRAAGLRHNEHAKLHSHQG---LGQGATKQCSR 116
AD KR RAAG + + A H+G GQ T+Q +
Sbjct: 232 ADADMKRPARAAGQKRTQQADQEQHRGSRAAGQKGTQQADQ 272
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +3
Query: 3 ADVLQKRQRRAAGLRHNEHAKLHSHQGLGQGATKQCSRGDG 125
AD KR RAAG + + A H+G K DG
Sbjct: 157 ADADMKRPARAAGQKGTQQADQEQHRGSRSAGQKGTQHFDG 197
>Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 3 ADVLQKRQRRAAGLRHNEHAKLHSHQG---LGQGATKQCSR 116
AD KR RAAG + + A H+G GQ T+Q +
Sbjct: 232 ADADMKRPARAAGQKRTQQADQEQHRGSRAAGQKGTQQADQ 272
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +3
Query: 3 ADVLQKRQRRAAGLRHNEHAKLHSHQGLGQGATKQCSRGDG 125
AD KR RAAG + + A H+G K DG
Sbjct: 157 ADADMKRPARAAGQKGTQQADQEQHRGSRSAGQKGTQHFDG 197
>Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 26.6 bits (56), Expect = 7.0
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +2
Query: 275 PRYHCCNCPP--VTSSPRC-GPMIQQKRKLQ--QPAQPMTARPTPP 397
PR+ PP V ++PR P I Q++ + QP QP+ P PP
Sbjct: 37 PRFLGQVVPPRAVNAAPRAPAPTIAQEKAIAVPQPQQPIALPPAPP 82
>Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 26.6 bits (56), Expect = 7.0
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +2
Query: 275 PRYHCCNCPP--VTSSPRC-GPMIQQKRKLQ--QPAQPMTARPTPP 397
PR+ PP V ++PR P I Q++ + QP QP+ P PP
Sbjct: 37 PRFLGQVVPPRAVNAAPRAPAPTIAQEKAIAVPQPQQPIALPPAPP 82
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 227 KRPRCTIRASKKCSRIPRYHCCNCPPVTSS 316
K PRCT + K S Y C N P T +
Sbjct: 200 KPPRCTKHSELKLSSAGEYFCKNGEPTTET 229
>U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical
protein ZC487.1b protein.
Length = 409
Score = 26.6 bits (56), Expect = 7.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 27 RRAAGLRHNEHAKLHSHQGLGQGATKQCSRGDGVVRC 137
RR + + NEH + + G + CS DG++ C
Sbjct: 147 RRNSSVHRNEHYVVQEYVDDGHEFSAVCSSSDGILGC 183
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 YYRNANAALL-VFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVG 141
Y ++A +L V I + + AI +EL SNVPE ++ +VG
Sbjct: 1354 YEKDAKEGMLRVETIEEVGTLVAIFRNNRELASNVPEELIAHIVG 1398
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 YYRNANAALL-VFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVG 141
Y ++A +L V I + + AI +EL SNVPE ++ +VG
Sbjct: 1335 YEKDAKEGMLRVETIEEVGTLVAIFRNNRELASNVPEELIAHIVG 1379
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 YYRNANAALL-VFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVG 141
Y ++A +L V I + + AI +EL SNVPE ++ +VG
Sbjct: 1391 YEKDAKEGMLRVETIEEVGTLVAIFRNNRELASNVPEELIAHIVG 1435
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 YYRNANAALL-VFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVG 141
Y ++A +L V I + + AI +EL SNVPE ++ +VG
Sbjct: 1345 YEKDAKEGMLRVETIEEVGTLVAIFRNNRELASNVPEELIAHIVG 1389
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 YYRNANAALL-VFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVG 141
Y ++A +L V I + + AI +EL SNVPE ++ +VG
Sbjct: 1345 YEKDAKEGMLRVETIEEVGTLVAIFRNNRELASNVPEELIAHIVG 1389
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 YYRNANAALL-VFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVG 141
Y ++A +L V I + + AI +EL SNVPE ++ +VG
Sbjct: 1345 YEKDAKEGMLRVETIEEVGTLVAIFRNNRELASNVPEELIAHIVG 1389
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 YYRNANAALL-VFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVG 141
Y ++A +L V I + + AI +EL SNVPE ++ +VG
Sbjct: 1354 YEKDAKEGMLRVETIEEVGTLVAIFRNNRELASNVPEELIAHIVG 1398
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 YYRNANAALL-VFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVG 141
Y ++A +L V I + + AI +EL SNVPE ++ +VG
Sbjct: 1345 YEKDAKEGMLRVETIEEVGTLVAIFRNNRELASNVPEELIAHIVG 1389
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 YYRNANAALL-VFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVG 141
Y ++A +L V I + + AI +EL SNVPE ++ +VG
Sbjct: 1335 YEKDAKEGMLRVETIEEVGTLVAIFRNNRELASNVPEELIAHIVG 1379
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 YYRNANAALL-VFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVG 141
Y ++A +L V I + + AI +EL SNVPE ++ +VG
Sbjct: 1391 YEKDAKEGMLRVETIEEVGTLVAIFRNNRELASNVPEELIAHIVG 1435
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 227 KRPRCTIRASKKCSRIPRYHCCNCPPVTSS 316
K PRCT + K S Y C N P T +
Sbjct: 200 KPPRCTKHSELKLSSAGEYFCKNGEPTTET 229
>Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical
protein T23F6.5 protein.
Length = 575
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +2
Query: 290 CNCPPVTSSPRCGPMIQQKRKLQQPAQ--PMTARPTPPKWSCR 412
C P P ++QQ LQ Q P PTPP SCR
Sbjct: 66 CANPQFAVHPYHTLVVQQHSNLQPIPQRLPNCESPTPPSLSCR 108
>Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 302 PVTSSPRCGPMIQQKRKLQQPAQPMTARPTPPK 400
P+ +S P + ++ LQ+P +P + PPK
Sbjct: 265 PIQASAPLRPPVAKQNSLQKPPEPKRSVGAPPK 297
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 302 PVTSSPRCGPMIQQKRKLQQPAQPMTARPTPPK 400
P+ +S P + ++ LQ+P +P + PPK
Sbjct: 265 PIQASAPLRPPVAKQNSLQKPPEPKRSVGAPPK 297
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 251 ASKKCSRIPRYHCCNCPPVTSSPRCGPM 334
A KC + C+CPP + P C M
Sbjct: 298 AGSKCINGVNSYFCDCPPERTGPYCEKM 325
>U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 10 protein.
Length = 375
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +2
Query: 227 KRPRCTIRASKKCSRIPRYHCCNCPPVTSSPRCGPMIQQKRKLQQPAQP 373
+ P C +A C P C + C P++QQ Q AQP
Sbjct: 237 QNPCCQQQAQSTCDCAPVQQNPCCQQAQPACDCAPVVQQNPCACQQAQP 285
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 251 ASKKCSRIPRYHCCNCPPVTSSPRCGPM 334
A KC + C+CPP + P C M
Sbjct: 298 AGSKCINGVNSYFCDCPPERTGPYCEKM 325
>AC025722-7|AAK68510.1| 540|Caenorhabditis elegans Hypothetical
protein Y50D4C.5 protein.
Length = 540
Score = 26.2 bits (55), Expect = 9.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 215 PLTAKRPRCTIRASKKCSRIPRYHCCNCPPVTSSPRCG--PMIQQKRKLQ 358
PL + + S K + NCP ++S+PR P QQ+++LQ
Sbjct: 351 PLPTRPAAAAAQKSVKQEVYEQSSSSNCPSISSTPRSSEDPANQQQQQLQ 400
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.124 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,858,239
Number of Sequences: 27780
Number of extensions: 206018
Number of successful extensions: 675
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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