BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1294
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 180 6e-46
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 151 4e-37
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr... 146 2e-35
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 114 6e-26
Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical p... 114 6e-26
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 114 6e-26
AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical ... 114 6e-26
AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical ... 99 2e-21
AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical ... 99 2e-21
U41264-3|AAA82423.1| 574|Caenorhabditis elegans Hypothetical pr... 85 4e-17
AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical ... 73 2e-13
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 31 0.68
CU457740-5|CAM36335.1| 361|Caenorhabditis elegans Hypothetical ... 30 1.2
Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z49127-8|CAD56567.1| 183|Caenorhabditis elegans Hypothetical pr... 29 3.6
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 3.6
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 3.6
AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine r... 29 3.6
U70850-4|AAB09125.3| 483|Caenorhabditis elegans Amino acid tran... 28 4.8
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 28 6.3
Z82256-1|CAB05113.1| 627|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 27 8.4
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 27 8.4
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 180 bits (439), Expect = 6e-46
Identities = 78/118 (66%), Positives = 98/118 (83%)
Frame = +3
Query: 195 MGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATN 374
MGT++GV+LPC+QNIFGV+ FIRL W++GTAG Q F +VLTC T LT+IS+SAIATN
Sbjct: 1 MGTIMGVFLPCLQNIFGVLFFIRLAWIIGTAGVFQAFFVVLTCVSVTFLTSISLSAIATN 60
Query: 375 GVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWISIF 548
GVVP+GG Y+MI R+LGPE GGAVG+LFY GTT+AA+MYI GA+EI+L Y+ P +F
Sbjct: 61 GVVPSGGPYYMISRNLGPELGGAVGILFYLGTTIAASMYITGAIEILLLYIYPQAKLF 118
>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
assigned gene nameprotein 158 protein.
Length = 1003
Score = 151 bits (366), Expect = 4e-37
Identities = 69/116 (59%), Positives = 89/116 (76%)
Frame = +3
Query: 195 MGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATN 374
+G L+GVYLP IQ+I GV +FIRL W+VG AG Q FL++ CC T LT IS+SA+ATN
Sbjct: 34 LGVLLGVYLPTIQHILGVTMFIRLFWLVGIAGLGQTFLLLFLCCFCTFLTCISISAVATN 93
Query: 375 GVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWIS 542
GVV +GG+YFMI R+LGPE G AVG+LFY T+A +MY+VG VEI+L Y+ P ++
Sbjct: 94 GVVESGGAYFMISRNLGPEFGSAVGILFYLANTVATSMYLVGGVEILLLYIFPGLT 149
>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
protein K02A2.3 protein.
Length = 1020
Score = 146 bits (353), Expect = 2e-35
Identities = 65/117 (55%), Positives = 90/117 (76%)
Frame = +3
Query: 195 MGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATN 374
+G ++GVYLP IQ+I GV +FIRL WVVG +G ++ CC +T+LT+IS+SA+ATN
Sbjct: 70 LGVMLGVYLPTIQHILGVTMFIRLFWVVGMSGVAWTMALLAICCLSTLLTSISLSAVATN 129
Query: 375 GVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWISI 545
GVV +GG+YF+I R+LG E G AVG+LFY T+AA+MYIVG VE++L Y+ P ++I
Sbjct: 130 GVVESGGAYFIISRNLGAEFGSAVGILFYLANTVAASMYIVGGVEVILMYLWPEMAI 186
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 114 bits (274), Expect = 6e-26
Identities = 53/106 (50%), Positives = 72/106 (67%)
Frame = +3
Query: 192 RMGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIAT 371
+ G + GV++ C+ NIFGV+L++R++WV G AG G IVL T +TA+S AI T
Sbjct: 243 KFGWIQGVFVRCLLNIFGVMLYLRVSWVSGQAGVGLGSCIVLLASVVTTITALSTCAICT 302
Query: 372 NGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVE 509
NG V GG+YF+I RSLGPE GG++G++F + AAMYIVG E
Sbjct: 303 NGDVKGGGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAE 348
>Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 114 bits (274), Expect = 6e-26
Identities = 53/106 (50%), Positives = 72/106 (67%)
Frame = +3
Query: 192 RMGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIAT 371
+ G + GV++ C+ NIFGV+L++R++WV G AG G IVL T +TA+S AI T
Sbjct: 243 KFGWIQGVFVRCLLNIFGVMLYLRVSWVSGQAGVGLGSCIVLLASVVTTITALSTCAICT 302
Query: 372 NGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVE 509
NG V GG+YF+I RSLGPE GG++G++F + AAMYIVG E
Sbjct: 303 NGDVKGGGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAE 348
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 114 bits (274), Expect = 6e-26
Identities = 53/106 (50%), Positives = 72/106 (67%)
Frame = +3
Query: 192 RMGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIAT 371
+ G + GV++ C+ NIFGV+L++R++WV G AG G IVL T +TA+S AI T
Sbjct: 243 KFGWIQGVFVRCLLNIFGVMLYLRVSWVSGQAGVGLGSCIVLLASVVTTITALSTCAICT 302
Query: 372 NGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVE 509
NG V GG+YF+I RSLGPE GG++G++F + AAMYIVG E
Sbjct: 303 NGDVKGGGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAE 348
>AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 114 bits (274), Expect = 6e-26
Identities = 53/106 (50%), Positives = 72/106 (67%)
Frame = +3
Query: 192 RMGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIAT 371
+ G + GV++ C+ NIFGV+L++R++WV G AG G IVL T +TA+S AI T
Sbjct: 243 KFGWIQGVFVRCLLNIFGVMLYLRVSWVSGQAGVGLGSCIVLLASVVTTITALSTCAICT 302
Query: 372 NGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVE 509
NG V GG+YF+I RSLGPE GG++G++F + AAMYIVG E
Sbjct: 303 NGDVKGGGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAE 348
>AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical
protein T04B8.5b protein.
Length = 939
Score = 99.1 bits (236), Expect = 2e-21
Identities = 44/108 (40%), Positives = 68/108 (62%)
Frame = +3
Query: 195 MGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATN 374
+ T+ GV+ P ++F ++LF+R+ +VVG G + L + MLT +S+ AI++N
Sbjct: 70 LSTISGVFAPVALSMFSILLFLRMGFVVGQLGFLMTILQLAMAYAIVMLTVLSLCAISSN 129
Query: 375 GVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVL 518
G V GG Y+MI RSLGPE GGA+G+LF+ + A+YI G E ++
Sbjct: 130 GAVEGGGVYYMISRSLGPEFGGAIGVLFFVANVFSCALYISGFTEALM 177
>AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical
protein T04B8.5a protein.
Length = 952
Score = 99.1 bits (236), Expect = 2e-21
Identities = 44/108 (40%), Positives = 68/108 (62%)
Frame = +3
Query: 195 MGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATN 374
+ T+ GV+ P ++F ++LF+R+ +VVG G + L + MLT +S+ AI++N
Sbjct: 83 LSTISGVFAPVALSMFSILLFLRMGFVVGQLGFLMTILQLAMAYAIVMLTVLSLCAISSN 142
Query: 375 GVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVL 518
G V GG Y+MI RSLGPE GGA+G+LF+ + A+YI G E ++
Sbjct: 143 GAVEGGGVYYMISRSLGPEFGGAIGVLFFVANVFSCALYISGFTEALM 190
>U41264-3|AAA82423.1| 574|Caenorhabditis elegans Hypothetical
protein F10E7.9 protein.
Length = 574
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/106 (36%), Positives = 60/106 (56%)
Frame = +3
Query: 198 GTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATNG 377
GT GV+ + NIFG+I+F+RL W+VGTAG L++ C ++T S I
Sbjct: 48 GTWDGVFATVMVNIFGIIVFLRLGWIVGTAGVANSILLLGICTSLALITVFSAIGIVERC 107
Query: 378 VVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIV 515
+ +GG YF++ LG + GGA+G+++ G +A + VG E V
Sbjct: 108 QIKSGGIYFLVSHVLGHQIGGAIGIIYAFGQAVATGLVAVGFGESV 153
>AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical
protein T04B8.5c protein.
Length = 836
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +3
Query: 336 MLTAISMSAIATNGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIV 515
MLT +S+ AI++NG V GG Y+MI RSLGPE GGA+G+LF+ + A+YI G E +
Sbjct: 14 MLTVLSLCAISSNGAVEGGGVYYMISRSLGPEFGGAIGVLFFVANVFSCALYISGFTEAL 73
Query: 516 L 518
+
Sbjct: 74 M 74
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 149 IRRRPRCPQASPTSPHGHAHRRVPALH----PEYLRCDLIHPAHLGC 277
+RR PR PQA PT H R VP + P R +++ A + C
Sbjct: 454 VRRPPRQPQALPTQDEIHVAREVPLANKSTTPSPTRSEMLRSAAIYC 500
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 149 IRRRPRCPQASPTSPHGHAHRRVPALH----PEYLRCDLIHPAHLGC 277
+RR PR PQA PT H R VP + P R +++ A + C
Sbjct: 454 VRRPPRQPQALPTQDEIHVAREVPLANKSTTPSPTRSEMLRSAAIYC 500
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 149 IRRRPRCPQASPTSPHGHAHRRVPALH----PEYLRCDLIHPAHLGC 277
+RR PR PQA PT H R VP + P R +++ A + C
Sbjct: 454 VRRPPRQPQALPTQDEIHVAREVPLANKSTTPSPTRSEMLRSAAIYC 500
>CU457740-5|CAM36335.1| 361|Caenorhabditis elegans Hypothetical
protein C50E10.5 protein.
Length = 361
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 234 NIFGVILFIRLTWVVGTAGAI 296
N+ +I+FI L+W++GTAG I
Sbjct: 63 NLTSLIIFILLSWILGTAGRI 83
>Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical
protein F44F4.4 protein.
Length = 890
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +3
Query: 294 IQGFLIV-LTCCCTTMLTAISM-SAIATNGVVPAGGSYFMIGRSLGP--ECGGAVGMLFY 461
I GF+I+ + C TTM +A+ + S AT V I + P CG A+G+LF+
Sbjct: 267 IVGFVIMSIFCTVTTMFSAVYLYSQKATFNKVALS-----IIACINPFMACGTAMGILFF 321
Query: 462 TGTTLAAAMYI 494
G T + M I
Sbjct: 322 CGVTFSPIMCI 332
>Z49127-8|CAD56567.1| 183|Caenorhabditis elegans Hypothetical
protein F13D12.10 protein.
Length = 183
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 441 AVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWISI 545
AV +T +L YI+GA +V M PW+++
Sbjct: 51 AVFAAIFTFHSLFTTFYIIGAFRLVECLMVPWLTL 85
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 86 PT*SSHVPQLASGLCEYNPHGIRRRPRCPQASPTSPHGHAHRRVPALHPEY 238
P+ S PQ + +Y+P P P +PTSP G + + P Y
Sbjct: 1735 PSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTY 1785
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 86 PT*SSHVPQLASGLCEYNPHGIRRRPRCPQASPTSPHGHAHRRVPALHPEY 238
P+ S PQ + +Y+P P P +PTSP G + + P Y
Sbjct: 1742 PSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTY 1792
>AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine
receptor, class h protein82 protein.
Length = 360
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 201 TLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCC 326
T GVY+ CI G I F+ L V+GT I + CC
Sbjct: 195 TASGVYVVCIDE--GYIKFLALFTVLGTLSEICQMAFFVLCC 234
>U70850-4|AAB09125.3| 483|Caenorhabditis elegans Amino acid
transporter protein 8 protein.
Length = 483
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 204 LIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIV-LTCCCTTMLTAISMSAIATNGV 380
LIG + +I G +FI +V AG++ LI+ + C M+TAI+ + T+
Sbjct: 11 LIGATSYIVGSIIGSGIFIAPKGIVEHAGSVGLSLIIWVFCALLNMITAINYIELGTS-- 68
Query: 381 VPAGGS 398
+P G+
Sbjct: 69 IPESGA 74
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 27.9 bits (59), Expect = 6.3
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = -2
Query: 508 STAPTMYIAAARVVPV*NSMPTAPPHSGPRDRPIMKYDPPAGTTPFVAMADIDIAVNIVV 329
STAP Y A P S T P + P + KY P A T + + + +V
Sbjct: 262 STAPPTYPTEAPTYPTTASYETTPSYPEPSYQVSKKY-PIAPT--YETTPSYETTPSYLV 318
Query: 328 QQQVRTMRNPCIAPAVPTTQVS 263
Q + + P IAP TT S
Sbjct: 319 QSHAASKKYP-IAPTYETTPSS 339
>Z82256-1|CAB05113.1| 627|Caenorhabditis elegans Hypothetical
protein B0513.1 protein.
Length = 627
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 484 AAARVVPV*NSMPTAPPHSGPRDRPIMKYDP 392
AAA V + + P AP H G ++P YDP
Sbjct: 578 AAALGVGLVDQQPAAPNHDGSANQPQRYYDP 608
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -3
Query: 255 IRSHRRYSGCKAGTRR*ACPCGLVGL--AWGHLGLRRMPWG 139
+R H+++S C G + CP G G A G GL P G
Sbjct: 72 VRRHKKHSQCNCGPQASNCPAGPPGPPGAPGDRGLDGQPGG 112
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +3
Query: 237 IFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAI 365
I+G I++ W+ G ++ FL+ + C T A+S++ +
Sbjct: 398 IYGTIIY----WMAGLVASVTSFLVFVFVCITLTWVAVSIAYV 436
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 107 PQLASGLCEYNPHGIRRRPRCPQASPTSPHGHAHRRVPALHPEYLR 244
PQ++ Y P+ + P P P PHG+ P P Y+R
Sbjct: 189 PQMSGQRMPY-PYPPQGMPGYPGGPPPPPHGYEGYPPPGAQPGYMR 233
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,606,154
Number of Sequences: 27780
Number of extensions: 348985
Number of successful extensions: 1338
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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