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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1294
         (629 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006659-2|AAF39883.2|  977|Caenorhabditis elegans Hypothetical ...   180   6e-46
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass...   151   4e-37
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr...   146   2e-35
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p...   114   6e-26
Z82268-10|CAB05202.1|  972|Caenorhabditis elegans Hypothetical p...   114   6e-26
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ...   114   6e-26
AL021476-1|CAA16317.1|  972|Caenorhabditis elegans Hypothetical ...   114   6e-26
AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical ...    99   2e-21
AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical ...    99   2e-21
U41264-3|AAA82423.1|  574|Caenorhabditis elegans Hypothetical pr...    85   4e-17
AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical ...    73   2e-13
Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical pr...    31   0.68 
Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical pr...    31   0.68 
Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical pr...    31   0.68 
CU457740-5|CAM36335.1|  361|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z49127-8|CAD56567.1|  183|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist...    29   3.6  
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele...    29   3.6  
AF022981-10|AAG24203.1|  360|Caenorhabditis elegans Serpentine r...    29   3.6  
U70850-4|AAB09125.3|  483|Caenorhabditis elegans Amino acid tran...    28   4.8  
AC024790-3|AAF60637.1|  446|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z82256-1|CAB05113.1|  627|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z46791-3|CAA86757.1|  323|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AF016661-4|AAB66050.2|  567|Caenorhabditis elegans Hypothetical ...    27   8.4  
AC006834-6|AAF40004.1|  233|Caenorhabditis elegans Hypothetical ...    27   8.4  

>AC006659-2|AAF39883.2|  977|Caenorhabditis elegans Hypothetical
           protein H16O14.1 protein.
          Length = 977

 Score =  180 bits (439), Expect = 6e-46
 Identities = 78/118 (66%), Positives = 98/118 (83%)
 Frame = +3

Query: 195 MGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATN 374
           MGT++GV+LPC+QNIFGV+ FIRL W++GTAG  Q F +VLTC   T LT+IS+SAIATN
Sbjct: 1   MGTIMGVFLPCLQNIFGVLFFIRLAWIIGTAGVFQAFFVVLTCVSVTFLTSISLSAIATN 60

Query: 375 GVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWISIF 548
           GVVP+GG Y+MI R+LGPE GGAVG+LFY GTT+AA+MYI GA+EI+L Y+ P   +F
Sbjct: 61  GVVPSGGPYYMISRNLGPELGGAVGILFYLGTTIAASMYITGAIEILLLYIYPQAKLF 118


>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 158 protein.
          Length = 1003

 Score =  151 bits (366), Expect = 4e-37
 Identities = 69/116 (59%), Positives = 89/116 (76%)
 Frame = +3

Query: 195 MGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATN 374
           +G L+GVYLP IQ+I GV +FIRL W+VG AG  Q FL++  CC  T LT IS+SA+ATN
Sbjct: 34  LGVLLGVYLPTIQHILGVTMFIRLFWLVGIAGLGQTFLLLFLCCFCTFLTCISISAVATN 93

Query: 375 GVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWIS 542
           GVV +GG+YFMI R+LGPE G AVG+LFY   T+A +MY+VG VEI+L Y+ P ++
Sbjct: 94  GVVESGGAYFMISRNLGPEFGSAVGILFYLANTVATSMYLVGGVEILLLYIFPGLT 149


>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
           protein K02A2.3 protein.
          Length = 1020

 Score =  146 bits (353), Expect = 2e-35
 Identities = 65/117 (55%), Positives = 90/117 (76%)
 Frame = +3

Query: 195 MGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATN 374
           +G ++GVYLP IQ+I GV +FIRL WVVG +G      ++  CC +T+LT+IS+SA+ATN
Sbjct: 70  LGVMLGVYLPTIQHILGVTMFIRLFWVVGMSGVAWTMALLAICCLSTLLTSISLSAVATN 129

Query: 375 GVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWISI 545
           GVV +GG+YF+I R+LG E G AVG+LFY   T+AA+MYIVG VE++L Y+ P ++I
Sbjct: 130 GVVESGGAYFIISRNLGAEFGSAVGILFYLANTVAASMYIVGGVEVILMYLWPEMAI 186


>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1c protein.
          Length = 1210

 Score =  114 bits (274), Expect = 6e-26
 Identities = 53/106 (50%), Positives = 72/106 (67%)
 Frame = +3

Query: 192 RMGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIAT 371
           + G + GV++ C+ NIFGV+L++R++WV G AG   G  IVL     T +TA+S  AI T
Sbjct: 243 KFGWIQGVFVRCLLNIFGVMLYLRVSWVSGQAGVGLGSCIVLLASVVTTITALSTCAICT 302

Query: 372 NGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVE 509
           NG V  GG+YF+I RSLGPE GG++G++F     + AAMYIVG  E
Sbjct: 303 NGDVKGGGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAE 348


>Z82268-10|CAB05202.1|  972|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1a protein.
          Length = 972

 Score =  114 bits (274), Expect = 6e-26
 Identities = 53/106 (50%), Positives = 72/106 (67%)
 Frame = +3

Query: 192 RMGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIAT 371
           + G + GV++ C+ NIFGV+L++R++WV G AG   G  IVL     T +TA+S  AI T
Sbjct: 243 KFGWIQGVFVRCLLNIFGVMLYLRVSWVSGQAGVGLGSCIVLLASVVTTITALSTCAICT 302

Query: 372 NGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVE 509
           NG V  GG+YF+I RSLGPE GG++G++F     + AAMYIVG  E
Sbjct: 303 NGDVKGGGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAE 348


>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1c protein.
          Length = 1210

 Score =  114 bits (274), Expect = 6e-26
 Identities = 53/106 (50%), Positives = 72/106 (67%)
 Frame = +3

Query: 192 RMGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIAT 371
           + G + GV++ C+ NIFGV+L++R++WV G AG   G  IVL     T +TA+S  AI T
Sbjct: 243 KFGWIQGVFVRCLLNIFGVMLYLRVSWVSGQAGVGLGSCIVLLASVVTTITALSTCAICT 302

Query: 372 NGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVE 509
           NG V  GG+YF+I RSLGPE GG++G++F     + AAMYIVG  E
Sbjct: 303 NGDVKGGGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAE 348


>AL021476-1|CAA16317.1|  972|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1a protein.
          Length = 972

 Score =  114 bits (274), Expect = 6e-26
 Identities = 53/106 (50%), Positives = 72/106 (67%)
 Frame = +3

Query: 192 RMGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIAT 371
           + G + GV++ C+ NIFGV+L++R++WV G AG   G  IVL     T +TA+S  AI T
Sbjct: 243 KFGWIQGVFVRCLLNIFGVMLYLRVSWVSGQAGVGLGSCIVLLASVVTTITALSTCAICT 302

Query: 372 NGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVE 509
           NG V  GG+YF+I RSLGPE GG++G++F     + AAMYIVG  E
Sbjct: 303 NGDVKGGGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAE 348


>AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical
           protein T04B8.5b protein.
          Length = 939

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 44/108 (40%), Positives = 68/108 (62%)
 Frame = +3

Query: 195 MGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATN 374
           + T+ GV+ P   ++F ++LF+R+ +VVG  G +   L +       MLT +S+ AI++N
Sbjct: 70  LSTISGVFAPVALSMFSILLFLRMGFVVGQLGFLMTILQLAMAYAIVMLTVLSLCAISSN 129

Query: 375 GVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVL 518
           G V  GG Y+MI RSLGPE GGA+G+LF+     + A+YI G  E ++
Sbjct: 130 GAVEGGGVYYMISRSLGPEFGGAIGVLFFVANVFSCALYISGFTEALM 177


>AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical
           protein T04B8.5a protein.
          Length = 952

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 44/108 (40%), Positives = 68/108 (62%)
 Frame = +3

Query: 195 MGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATN 374
           + T+ GV+ P   ++F ++LF+R+ +VVG  G +   L +       MLT +S+ AI++N
Sbjct: 83  LSTISGVFAPVALSMFSILLFLRMGFVVGQLGFLMTILQLAMAYAIVMLTVLSLCAISSN 142

Query: 375 GVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVL 518
           G V  GG Y+MI RSLGPE GGA+G+LF+     + A+YI G  E ++
Sbjct: 143 GAVEGGGVYYMISRSLGPEFGGAIGVLFFVANVFSCALYISGFTEALM 190


>U41264-3|AAA82423.1|  574|Caenorhabditis elegans Hypothetical
           protein F10E7.9 protein.
          Length = 574

 Score = 85.0 bits (201), Expect = 4e-17
 Identities = 39/106 (36%), Positives = 60/106 (56%)
 Frame = +3

Query: 198 GTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATNG 377
           GT  GV+   + NIFG+I+F+RL W+VGTAG     L++  C    ++T  S   I    
Sbjct: 48  GTWDGVFATVMVNIFGIIVFLRLGWIVGTAGVANSILLLGICTSLALITVFSAIGIVERC 107

Query: 378 VVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIV 515
            + +GG YF++   LG + GGA+G+++  G  +A  +  VG  E V
Sbjct: 108 QIKSGGIYFLVSHVLGHQIGGAIGIIYAFGQAVATGLVAVGFGESV 153


>AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical
           protein T04B8.5c protein.
          Length = 836

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 31/61 (50%), Positives = 43/61 (70%)
 Frame = +3

Query: 336 MLTAISMSAIATNGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIV 515
           MLT +S+ AI++NG V  GG Y+MI RSLGPE GGA+G+LF+     + A+YI G  E +
Sbjct: 14  MLTVLSLCAISSNGAVEGGGVYYMISRSLGPEFGGAIGVLFFVANVFSCALYISGFTEAL 73

Query: 516 L 518
           +
Sbjct: 74  M 74


>Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +2

Query: 149 IRRRPRCPQASPTSPHGHAHRRVPALH----PEYLRCDLIHPAHLGC 277
           +RR PR PQA PT    H  R VP  +    P   R +++  A + C
Sbjct: 454 VRRPPRQPQALPTQDEIHVAREVPLANKSTTPSPTRSEMLRSAAIYC 500


>Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical
           protein T23B5.3b protein.
          Length = 540

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +2

Query: 149 IRRRPRCPQASPTSPHGHAHRRVPALH----PEYLRCDLIHPAHLGC 277
           +RR PR PQA PT    H  R VP  +    P   R +++  A + C
Sbjct: 454 VRRPPRQPQALPTQDEIHVAREVPLANKSTTPSPTRSEMLRSAAIYC 500


>Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +2

Query: 149 IRRRPRCPQASPTSPHGHAHRRVPALH----PEYLRCDLIHPAHLGC 277
           +RR PR PQA PT    H  R VP  +    P   R +++  A + C
Sbjct: 454 VRRPPRQPQALPTQDEIHVAREVPLANKSTTPSPTRSEMLRSAAIYC 500


>CU457740-5|CAM36335.1|  361|Caenorhabditis elegans Hypothetical
           protein C50E10.5 protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = +3

Query: 234 NIFGVILFIRLTWVVGTAGAI 296
           N+  +I+FI L+W++GTAG I
Sbjct: 63  NLTSLIIFILLSWILGTAGRI 83


>Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical
           protein F44F4.4 protein.
          Length = 890

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +3

Query: 294 IQGFLIV-LTCCCTTMLTAISM-SAIATNGVVPAGGSYFMIGRSLGP--ECGGAVGMLFY 461
           I GF+I+ + C  TTM +A+ + S  AT   V        I   + P   CG A+G+LF+
Sbjct: 267 IVGFVIMSIFCTVTTMFSAVYLYSQKATFNKVALS-----IIACINPFMACGTAMGILFF 321

Query: 462 TGTTLAAAMYI 494
            G T +  M I
Sbjct: 322 CGVTFSPIMCI 332


>Z49127-8|CAD56567.1|  183|Caenorhabditis elegans Hypothetical
           protein F13D12.10 protein.
          Length = 183

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 441 AVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWISI 545
           AV    +T  +L    YI+GA  +V   M PW+++
Sbjct: 51  AVFAAIFTFHSLFTTFYIIGAFRLVECLMVPWLTL 85


>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
            protein 1 protein.
          Length = 1852

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 86   PT*SSHVPQLASGLCEYNPHGIRRRPRCPQASPTSPHGHAHRRVPALHPEY 238
            P+ S   PQ +    +Y+P      P  P  +PTSP G +  +     P Y
Sbjct: 1735 PSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTY 1785


>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
            RNA polymeraseII largest subunit (ama-1 IV) gene,
            complete cds. ).
          Length = 1859

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 86   PT*SSHVPQLASGLCEYNPHGIRRRPRCPQASPTSPHGHAHRRVPALHPEY 238
            P+ S   PQ +    +Y+P      P  P  +PTSP G +  +     P Y
Sbjct: 1742 PSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTY 1792


>AF022981-10|AAG24203.1|  360|Caenorhabditis elegans Serpentine
           receptor, class h protein82 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 201 TLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCC 326
           T  GVY+ CI    G I F+ L  V+GT   I      + CC
Sbjct: 195 TASGVYVVCIDE--GYIKFLALFTVLGTLSEICQMAFFVLCC 234


>U70850-4|AAB09125.3|  483|Caenorhabditis elegans Amino acid
           transporter protein 8 protein.
          Length = 483

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 204 LIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIV-LTCCCTTMLTAISMSAIATNGV 380
           LIG     + +I G  +FI    +V  AG++   LI+ + C    M+TAI+   + T+  
Sbjct: 11  LIGATSYIVGSIIGSGIFIAPKGIVEHAGSVGLSLIIWVFCALLNMITAINYIELGTS-- 68

Query: 381 VPAGGS 398
           +P  G+
Sbjct: 69  IPESGA 74


>AC024790-3|AAF60637.1|  446|Caenorhabditis elegans Hypothetical
           protein Y47D7A.6 protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 25/82 (30%), Positives = 33/82 (40%)
 Frame = -2

Query: 508 STAPTMYIAAARVVPV*NSMPTAPPHSGPRDRPIMKYDPPAGTTPFVAMADIDIAVNIVV 329
           STAP  Y   A   P   S  T P +  P  +   KY P A T  +      +   + +V
Sbjct: 262 STAPPTYPTEAPTYPTTASYETTPSYPEPSYQVSKKY-PIAPT--YETTPSYETTPSYLV 318

Query: 328 QQQVRTMRNPCIAPAVPTTQVS 263
           Q    + + P IAP   TT  S
Sbjct: 319 QSHAASKKYP-IAPTYETTPSS 339


>Z82256-1|CAB05113.1|  627|Caenorhabditis elegans Hypothetical
           protein B0513.1 protein.
          Length = 627

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 484 AAARVVPV*NSMPTAPPHSGPRDRPIMKYDP 392
           AAA  V + +  P AP H G  ++P   YDP
Sbjct: 578 AAALGVGLVDQQPAAPNHDGSANQPQRYYDP 608


>Z46791-3|CAA86757.1|  323|Caenorhabditis elegans Hypothetical
           protein C09G5.4 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 255 IRSHRRYSGCKAGTRR*ACPCGLVGL--AWGHLGLRRMPWG 139
           +R H+++S C  G +   CP G  G   A G  GL   P G
Sbjct: 72  VRRHKKHSQCNCGPQASNCPAGPPGPPGAPGDRGLDGQPGG 112


>AF016661-4|AAB66050.2|  567|Caenorhabditis elegans Hypothetical
           protein F02E11.1 protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +3

Query: 237 IFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAI 365
           I+G I++    W+ G   ++  FL+ +  C T    A+S++ +
Sbjct: 398 IYGTIIY----WMAGLVASVTSFLVFVFVCITLTWVAVSIAYV 436


>AC006834-6|AAF40004.1|  233|Caenorhabditis elegans Hypothetical
           protein ZK973.9 protein.
          Length = 233

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +2

Query: 107 PQLASGLCEYNPHGIRRRPRCPQASPTSPHGHAHRRVPALHPEYLR 244
           PQ++     Y P+  +  P  P   P  PHG+     P   P Y+R
Sbjct: 189 PQMSGQRMPY-PYPPQGMPGYPGGPPPPPHGYEGYPPPGAQPGYMR 233


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,606,154
Number of Sequences: 27780
Number of extensions: 348985
Number of successful extensions: 1338
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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