Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1293
(513 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.3
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 4.3
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 4.3
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 7.5
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 7.5
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 7.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 7.5
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 21 9.9
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 9.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.9
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 9.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.9
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 4.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 307 FIALHASSASCKFSNSMKAKPGG 239
F+A A+C+FS +A+ GG
Sbjct: 458 FLATVVEEAACRFSAVAQAQLGG 480
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 25 FLFINVFKISQNR 63
FL+ N+FK +NR
Sbjct: 361 FLYYNIFKALRNR 373
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 4.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 288 LPPPASSQIL*KRNLGDLVLPKLS 217
L P S I K+ + DLV+ KLS
Sbjct: 206 LQPVVSDPIFDKKAMSDLVICKLS 229
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 4.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 288 LPPPASSQIL*KRNLGDLVLPKLS 217
L P S I K+ + DLV+ KLS
Sbjct: 206 LQPVVSDPIFDKKAMSDLVICKLS 229
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 213 LNSVWVALNPPGFAF 257
L VW+ + PPG F
Sbjct: 641 LTLVWMIIEPPGTRF 655
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +1
Query: 391 GAAVTSGVVVHSEVREEAGLTT 456
G + +G+ VH ++AG+ T
Sbjct: 289 GIVLATGITVHRNSAQQAGVGT 310
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +1
Query: 391 GAAVTSGVVVHSEVREEAGLTT 456
G + +G+ VH ++AG+ T
Sbjct: 289 GIVLATGITVHRNSAQQAGVGT 310
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 213 LNSVWVALNPPGFAF 257
L VW+ + PPG F
Sbjct: 731 LTLVWMIIEPPGTRF 745
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3
Query: 174 KEDLEREFDKYGKL 215
+++ +R F+KYG+L
Sbjct: 182 EQEAKRRFEKYGQL 195
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 203 SNSLRSRTHGFQHTSSRYS 221
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 203 SNSLRSRTHGFQHTSSRYS 221
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSHYS 232
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSHYS 232
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSHYS 232
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSHYS 232
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 203 SNSLRSRTHGFQHTSSHYS 221
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSHYS 232
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 211 FPYLSNSRSRSSFLIP 164
FPYL +FLIP
Sbjct: 7 FPYLCYKNGGGAFLIP 22
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 268 SNSMKAKPGGFSATQTEFS 212
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,104
Number of Sequences: 438
Number of extensions: 1962
Number of successful extensions: 25
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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