Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1292
(648 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 1.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 1.6
AY052625-1|AAL15473.1| 135|Tribolium castaneum tryptophan oxyge... 22 5.0
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 22 5.0
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 22 5.0
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 22 5.0
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 22 5.0
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 8.7
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 8.7
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 8.7
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 8.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 8.7
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 8.7
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -3
Query: 604 GLMPPSAV*SASLPHRDAHPGMRPSRPDPE 515
GL+PP S PH +HP + P E
Sbjct: 228 GLIPPHPGLSPHPPHLSSHPAIVTPGPKQE 257
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -3
Query: 604 GLMPPSAV*SASLPHRDAHPGMRPSRPDPE 515
GL+PP S PH +HP + P E
Sbjct: 120 GLIPPHPGLSPHPPHLSSHPAIVTPGPKQE 149
>AY052625-1|AAL15473.1| 135|Tribolium castaneum tryptophan
oxygenase protein.
Length = 135
Score = 21.8 bits (44), Expect = 5.0
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1
Query: 393 EAELLTGQANRRSVHNRHHFSHVIRDE-TVEQVLITVQEPHKIDVLVKWI 247
E +L Q NR +N+++ DE +EQ+ + +EP D++ +W+
Sbjct: 82 ENKLGVRQENRVK-YNQNYSKVFGNDEKALEQIAKSEKEPSLTDLVQRWL 130
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.8 bits (44), Expect = 5.0
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1
Query: 393 EAELLTGQANRRSVHNRHHFSHVIRDE-TVEQVLITVQEPHKIDVLVKWI 247
E +L Q NR +N+++ DE +EQ+ + +EP D++ +W+
Sbjct: 142 ENKLGVRQENRVK-YNQNYSKVFGNDEKALEQIAKSEKEPSLTDLVQRWL 190
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.8 bits (44), Expect = 5.0
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1
Query: 393 EAELLTGQANRRSVHNRHHFSHVIRDE-TVEQVLITVQEPHKIDVLVKWI 247
E +L Q NR +N+++ DE +EQ+ + +EP D++ +W+
Sbjct: 142 ENKLGVRQENRVK-YNQNYSKVFGNDEKALEQIAKSEKEPSLTDLVQRWL 190
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 274 MGLLDRNEHLFYRFVADNVAEMMPI 348
+GL+ R+ + YR +ADNVA I
Sbjct: 150 VGLI-RDTAVLYRLLADNVANFNKI 173
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 292 NEHLFYRFVADNVAEMMPIVYTPTVGLACQKFG 390
N H F RF+A N+ ++ +Y+ V FG
Sbjct: 108 NCHTFGRFLAPNLTYLLVALYSGYVWTDILGFG 140
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -2
Query: 86 RPLVGCPSPEPHNPIRSRSISLYVHFRP 3
+PL P P P P S ++ Y + P
Sbjct: 201 QPLQPFPPPYPFYPGTSAMLAAYQRYNP 228
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +1
Query: 556 PCGANSRSTPRSEASSRISVCPSLSTWV 639
P A STP ++ S + P WV
Sbjct: 410 PEWARPPSTPSADGSKPVQTTPKPGQWV 437
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +2
Query: 215 NYASSRSIDTKIHLTSTSILWGSW 286
NYA++ S+ ++ + ++S + G W
Sbjct: 110 NYANASSVGSRNPIHTSSYMTGIW 133
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +2
Query: 215 NYASSRSIDTKIHLTSTSILWGSW 286
NYA++ S+ ++ + ++S + G W
Sbjct: 343 NYANASSVGSRNPIHTSSYMTGIW 366
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +2
Query: 215 NYASSRSIDTKIHLTSTSILWGSW 286
NYA++ S+ ++ + ++S + G W
Sbjct: 343 NYANASSVGSRNPIHTSSYMTGIW 366
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/24 (25%), Positives = 16/24 (66%)
Frame = -1
Query: 318 DETVEQVLITVQEPHKIDVLVKWI 247
++ +EQ+ + +EP D++ +W+
Sbjct: 7 EKALEQIAKSEKEPSLTDLVQRWL 30
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,153
Number of Sequences: 336
Number of extensions: 4072
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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