Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1292
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 183 1e-46
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 182 2e-46
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 178 3e-45
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 177 5e-45
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 142 2e-34
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 136 1e-32
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 112 3e-25
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532... 31 0.79
08_01_0017 + 132109-132924 31 1.0
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 30 1.8
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 30 1.8
10_05_0042 + 8481227-8481764,8482291-8482418,8483349-8483933,848... 29 2.4
08_01_0680 - 5958066-5960253,5960707-5961503 29 3.2
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 4.2
01_03_0050 + 11959421-11959736,11959892-11959960,11960641-119609... 29 4.2
06_01_0782 - 5848381-5849394,5851143-5851255,5851337-5851440,585... 28 5.6
12_01_0725 + 6428572-6428817 28 7.4
09_04_0389 + 17239182-17239316,17240246-17240878 28 7.4
03_06_0615 + 35118336-35120402 28 7.4
06_03_0401 + 20424932-20425847,20425908-20426144,20426184-204262... 27 9.7
04_04_1659 - 35127145-35127204,35127324-35127464,35127597-351276... 27 9.7
03_06_0416 - 33780911-33781861 27 9.7
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 27 9.7
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 183 bits (445), Expect = 1e-46
Identities = 87/165 (52%), Positives = 114/165 (69%)
Frame = +1
Query: 88 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 267
SG L+ P NKG+AF+ ER + GLLPP + +QE Q + ++ Y PL +YI
Sbjct: 30 SGYTLLRDPRHNKGLAFSEAERDAHYLRGLLPPSIVSQELQEKKLMHNLRNYTVPLQRYI 89
Query: 268 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 447
+M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG +
Sbjct: 90 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKI 149
Query: 448 YDVLKNWPETDVRAIVVTDGERILGLGDLGACRDGHPCGANSRST 582
+VLKNWPE ++ IVVTDGERILGLGDLG G P G S T
Sbjct: 150 LEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYT 194
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 519 GSGRLGRMPGWASLWGKLALYTALGGIKPHQCLPITIDVGTN 644
G G LG G GKL+LYTALGG++P CLPITIDVGTN
Sbjct: 174 GLGDLG-CQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTN 214
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 182 bits (444), Expect = 2e-46
Identities = 85/165 (51%), Positives = 118/165 (71%)
Frame = +1
Query: 88 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 267
SG L+ P NKG+AF+ +ER + GLLPP V +Q+ QV+ ++ +Y PL +Y+
Sbjct: 99 SGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYM 158
Query: 268 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 447
+M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++R+P+GL++++ DKG V
Sbjct: 159 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKV 218
Query: 448 YDVLKNWPETDVRAIVVTDGERILGLGDLGACRDGHPCGANSRST 582
DVL+NWPE +++ IVVTDGERILGLGDLG G P G S T
Sbjct: 219 LDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYT 263
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 519 GSGRLGRMPGWASLWGKLALYTALGGIKPHQCLPITIDVGTN 644
G G LG G GKL+LYTALGG++P CLPITIDVGTN
Sbjct: 243 GLGDLG-CQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTN 283
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 178 bits (434), Expect = 3e-45
Identities = 82/159 (51%), Positives = 112/159 (70%)
Frame = +1
Query: 88 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 267
SG + L+ P NKG+AF ER+ + GLLPP + +QE Q +I +Y+ PL KY+
Sbjct: 53 SGYNLLRDPRYNKGLAFNERERETHYLRGLLPPAIVSQELQERKIMHNIRQYQLPLQKYM 112
Query: 268 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 447
+M L + NE LFY+ + DNV E++P+VYTPTVG ACQK+G ++ RP+GL+I++ +KG +
Sbjct: 113 AMMDLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQGLYISLKEKGKI 172
Query: 448 YDVLKNWPETDVRAIVVTDGERILGLGDLGACRDGHPCG 564
+VLKNWPE ++ IVVTDGERILGLGDLG G P G
Sbjct: 173 LEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 211
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3
Query: 519 GSGRLGRMPGWASLWGKLALYTALGGIKP 605
G G LG G GKLALYTALGG++P
Sbjct: 197 GLGDLG-CQGMGIPVGKLALYTALGGVRP 224
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 177 bits (432), Expect = 5e-45
Identities = 81/159 (50%), Positives = 115/159 (72%)
Frame = +1
Query: 88 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 267
SG L+ P NKG++FT +ER + GLLPP V +QE Q + ++ +++ PL +Y+
Sbjct: 33 SGHSLLRDPRHNKGLSFTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPLQRYM 92
Query: 268 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 447
LM L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++RRP+GL+I++ +KG +
Sbjct: 93 ALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGRI 152
Query: 448 YDVLKNWPETDVRAIVVTDGERILGLGDLGACRDGHPCG 564
++L+NWPE ++ IVVTDGERILGLGDLG G P G
Sbjct: 153 LELLRNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVG 191
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/42 (66%), Positives = 30/42 (71%)
Frame = +3
Query: 519 GSGRLGRMPGWASLWGKLALYTALGGIKPHQCLPITIDVGTN 644
G G LG G GKLALYTALGG++P CLPITIDVGTN
Sbjct: 177 GLGDLG-CQGMGIPVGKLALYTALGGVRPSACLPITIDVGTN 217
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 142 bits (344), Expect = 2e-34
Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 10/168 (5%)
Frame = +1
Query: 91 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYEN------- 249
G D L P NK AF + ER LG+ GLLPPRV + E+Q + S E+
Sbjct: 46 GTDILHDPWFNKDTAFPMTERDRLGLRGLLPPRVMSFEQQYDRFINSFRSLEHNTRGEPD 105
Query: 250 ---PLNKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLF 420
L K+ L L DRNE L+YR + DN+ + PI+YTPTVGL C+ + ++RRPRG++
Sbjct: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMY 165
Query: 421 ITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACRDGHPCG 564
+ DKG + ++ NWP V IVVTDG RILGLGDLG G P G
Sbjct: 166 FSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIG 213
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +3
Query: 519 GSGRLGRMPGWASLWGKLALYTALGGIKPHQCLPITIDVGTN 644
G G LG + G GKL +Y A GI P + LPI +DVGTN
Sbjct: 199 GLGDLG-VQGIGIPIGKLDVYVAAAGINPQKVLPIMLDVGTN 239
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 136 bits (329), Expect = 1e-32
Identities = 59/99 (59%), Positives = 77/99 (77%)
Frame = +1
Query: 286 DRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKN 465
+R+E LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG + +VLKN
Sbjct: 5 ERSERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKILEVLKN 64
Query: 466 WPETDVRAIVVTDGERILGLGDLGACRDGHPCGANSRST 582
WPE ++ IV+TDGERILGLGDLG G P G S T
Sbjct: 65 WPERSIQVIVITDGERILGLGDLGCQGMGIPVGKLSLYT 103
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 519 GSGRLGRMPGWASLWGKLALYTALGGIK 602
G G LG G GKL+LYTALGG++
Sbjct: 83 GLGDLG-CQGMGIPVGKLSLYTALGGVR 109
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 112 bits (269), Expect = 3e-25
Identities = 70/183 (38%), Positives = 97/183 (53%), Gaps = 10/183 (5%)
Frame = +1
Query: 19 YSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGLNKGMAFTIEERQL------LGIHGLL 180
+S ERDR+GL G S +D P L F E + + L +
Sbjct: 60 FSMTERDRLGLRGLLPPNVVSSQQQIDRFT-PTLKYQYKFHSEIQHIDAKGLALNYLNIS 118
Query: 181 PPRVKTQEEQVELCKLSIDRYEN--PLNKYIYLMGLLDRNEHLFYR--FVADNVAEMMPI 348
P ++ + V K + D + PL K+ L L DRNE ++Y+ + DN+ E PI
Sbjct: 119 PAICESSQYCVNADKYARDGPSDTYPLAKWRILNRLHDRNETMYYKAEVLIDNIEEHAPI 178
Query: 349 VYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLG 528
VYTPTVGL CQ + ++RRPRG++ + D+G + ++ NWP V IVVTDG RILGLG
Sbjct: 179 VYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLG 238
Query: 529 DLG 537
DLG
Sbjct: 239 DLG 241
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 91 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVE 216
G D L P N+G F++ ER LG+ GLLPP V + ++Q++
Sbjct: 45 GSDILHDPWFNRGTGFSMTERDRLGLRGLLPPNVVSSQQQID 86
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +3
Query: 519 GSGRLGRMPGWASLWGKLALYTALGGIKPHQCLPITIDVGTN 644
G G LG + G GKL LY A GI P + LP+ IDVGTN
Sbjct: 236 GLGDLG-VHGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTN 276
>05_05_0165 +
22851863-22852566,22852811-22852964,22853112-22853261,
22853769-22853930,22854070-22854242,22854330-22854396,
22854556-22854722,22855216-22855374,22856187-22856276,
22856392-22856483,22856587-22856681,22857328-22857405,
22858364-22858459,22859132-22859206,22859290-22859381,
22859462-22859624,22859734-22859794,22860016-22860116,
22860567-22860614
Length = 908
Score = 31.1 bits (67), Expect = 0.79
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 128 PLLRPGCLRWSRPERPL--VGCPSPEPHNPIRSRSIS 24
PL PGC R R R L + PSP P + RS+S+S
Sbjct: 22 PLRSPGCRRRRRRGRVLSALSSPSPSPSSASRSQSVS 58
>08_01_0017 + 132109-132924
Length = 271
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2
Query: 263 YLLSGFSYLSIESLHSSTCSSC 198
YL +GFS+ S +S HSSTCS C
Sbjct: 84 YLSAGFSFASRDS-HSSTCSCC 104
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -2
Query: 164 PKS*RSSMVKAMPLLRPGCLRWSRPERPLVG-CPSPEPHNPIRS 36
P+S SS K +PL RP SRPE P S P P S
Sbjct: 217 PQSSHSSYSKILPLFRPKSNSRSRPESPAASDAASQTPFRPTES 260
>06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 420 EEAPWSAVHEAELLTGQANRRSVHNRHHFSHVIRDETVEQV 298
EEAP + E E++ Q SV H HV+RDE +E++
Sbjct: 1165 EEAPHDILTE-EMILEQKELISVLETHREEHVLRDELLERI 1204
>10_05_0042 +
8481227-8481764,8482291-8482418,8483349-8483933,
8484033-8484061,8485221-8485612,8486038-8486454,
8486587-8486668,8487116-8487686
Length = 913
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -1
Query: 552 PIPACAQVAQTQNTFSVGYNNGADVRLRPVLKNIVYMSLIVDRDEEAP 409
P P C Q+A + + G V++R + ++ L +DR +E P
Sbjct: 252 PTPMCLQLADSSVRYPAGIAEDVPVKIRDFFIPVDFVVLDMDRGKETP 299
>08_01_0680 - 5958066-5960253,5960707-5961503
Length = 994
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 10 KCTYSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGL 120
K Y E R+ IG WGSG G+ + HL + L
Sbjct: 380 KKEYWESIRNSIGTWGSGTNPTLEGMRQILHLSYKDL 416
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 475 TDVRAIVVTDGERILGLGDLGACRDGHPCGANSRSTPRSEASSRISVCPSLST 633
+D A T G+R G G G G S S+PR+ +SR S+ PSL++
Sbjct: 219 SDEDAAYYTPGQRSAGSGGGGGGEGGGTWSEASASSPRTTTASRRSL-PSLTS 270
>01_03_0050 +
11959421-11959736,11959892-11959960,11960641-11960979,
11961090-11961152,11962472-11962962,11963773-11964441
Length = 648
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 371 WPVRSSA--SCTADQGASSSRSTIRDMYTMFL 460
+P RSSA SC A G+SS RST Y +++
Sbjct: 87 FPFRSSAAASCVAPPGSSSDRSTQLPKYPLYM 118
>06_01_0782 -
5848381-5849394,5851143-5851255,5851337-5851440,
5851584-5851660,5851740-5852132,5852267-5852482,
5852826-5852923,5853503-5853637,5853745-5853811,
5853999-5854094,5854555-5854683
Length = 813
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 564 PTGMPIPACAQVAQTQNTFSVGYNNGADVRLRPVL 460
P+G +PA AQVA Q F+ G+N A + RP+L
Sbjct: 368 PSGKLLPATAQVAFQQADFA-GWNLWAAINDRPLL 401
>12_01_0725 + 6428572-6428817
Length = 81
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 152 RSSMVKAMPLLRP-GCLRWSRPERPLVGCPSPEP-HNP 45
R+ V+ P++ P GC R E CP+P P H+P
Sbjct: 44 RALQVRPSPVVEPSGCCSGHRSEAVASWCPNPTPCHDP 81
>09_04_0389 + 17239182-17239316,17240246-17240878
Length = 255
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 607 CGLMPPSAV*SASLPHRDAHP 545
C L PP ++S PHR AHP
Sbjct: 63 CSLKPPVTYGASSRPHRIAHP 83
>03_06_0615 + 35118336-35120402
Length = 688
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 474 LRPVLKNIVYMSLIVDRDE-EAPWSAVHEAELLTGQANR 361
L P +VY+S V E + W+AV+ EL TG+ R
Sbjct: 139 LTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRR 177
>06_03_0401 +
20424932-20425847,20425908-20426144,20426184-20426262,
20426308-20427220
Length = 714
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -1
Query: 552 PIPACAQVAQTQNTFSVGYNNGADVRLRPVLKNIVYMSLIVDRDEEAP 409
P P C Q+A + + G V++R + ++ L +D +E P
Sbjct: 528 PTPMCLQLADSSVRYLTGIPEDVPVKIRDFFIQVDFVVLDMDTGKETP 575
>04_04_1659 -
35127145-35127204,35127324-35127464,35127597-35127647,
35127757-35127837,35128229-35128324,35128393-35128568,
35130088-35130176,35130255-35130362,35130673-35130809,
35131023-35131073,35131264-35131310,35131477-35131544,
35132161-35132262,35132556-35132735,35132821-35133059
Length = 541
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 546 PACAQVAQTQNTFSVGYNNGADVRLRPVLKNIVYMSLIVDRDEEA 412
P+ A S G G V P ++N++Y L+ R+EEA
Sbjct: 15 PSPRAAAAAAGLGSGGGGGGGSVHGSPDIRNVIYERLVAIRNEEA 59
>03_06_0416 - 33780911-33781861
Length = 316
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -3
Query: 418 RGPLVGGTRGRTSDRPGQPSECTQSASFQPRYPRRNGRTGAHYGPRAP 275
R P GGT R + P P+ + P P R GR PRAP
Sbjct: 17 RSPTAGGTPSRLAVAPPSPTTPQCAIPASPHTPGR-GRAPPPATPRAP 63
>01_06_0756 -
31731607-31731752,31732368-31732467,31732716-31732943,
31733390-31733474,31733583-31733662,31733755-31733826,
31733964-31734058,31735442-31735523,31735646-31735927
Length = 389
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 1 GGRKCTYSEMERDRIGLWGSGDGQPTS-GLSGLDHLKHP 114
GGRK Y R +I SG G +S SG DH+ P
Sbjct: 320 GGRKGRYKSQGRGQIQQNTSGQGHVSSPATSGSDHVNKP 358
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,061,713
Number of Sequences: 37544
Number of extensions: 522094
Number of successful extensions: 1657
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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