Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1292
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    27   0.51 
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        25   2.1  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   2.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   3.6  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    24   3.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.3  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   8.3  
AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    23   8.3  

>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +1

Query: 475 TDVRAIVVTDGERILGLGDLGACRDGHPCGANSRSTPRSEASSRISVCPSLSTWVRTP 648
           TD+ A+   DGE     G+ G CR    C   +R T  S +++   VC   S  + +P
Sbjct: 15  TDLFAL--QDGESCSHQGESGVCRPYSKCKRGNRITVCSYSATEAIVCCPQSQQLDSP 70


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +3

Query: 357 SDGWPGLSEVRPR--VPPTKGP 416
           +DG P  S VRPR   PPT  P
Sbjct: 53  TDGTPAPSTVRPRPPAPPTNAP 74


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 415 GPLVGGTRGRTSDRPGQPSECTQSASFQPRY-PRRNGRTG 299
           GP+V      T  R  QP   T+S+S  P +  R NG  G
Sbjct: 445 GPIVYYPARETLPRLAQPPTITRSSSMFPDWSARENGTNG 484


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -3

Query: 370  GQPSECTQSASFQPRYPRRNGRTGAHYGP 284
            G  S  T S S Q   PR  G  G H GP
Sbjct: 1404 GGESMGTASTSSQTDEPRPGGSGGGHTGP 1432


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 46  GLWGSGDGQPTSG 84
           GLWGSG+G  T G
Sbjct: 359 GLWGSGNGTNTFG 371


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/39 (30%), Positives = 13/39 (33%)
 Frame = +3

Query: 420 HHDPR*GTCIRCS*ELAGDGRPRHCCNRRRTYSGSGRLG 536
           HHD   G  +       G G    C N  RT    G  G
Sbjct: 501 HHDLASGVVVNAVLAAGGGGGGSGCVNGSRTVGAGGMAG 539


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 25  EMERDRIGLWGSGDGQPTSGLSGLDHLKHP 114
           E+ +  IGL GSG G P+S    ++ +  P
Sbjct: 728 ELMQRSIGLGGSGAGGPSSSPPVMESIPPP 757


>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 555 SLWGKLALYTALGGIKPHQCLPITIDVGT 641
           +++  +A+ T L  + PH  LP+ +D GT
Sbjct: 32  NIYDPVAMDT-LSKLNPHHILPMLVDNGT 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,144
Number of Sequences: 2352
Number of extensions: 17109
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)