Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1290
(688 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 27 0.55
AY341161-1|AAR13725.1| 159|Anopheles gambiae CED6 protein. 26 0.97
AY341160-1|AAR13724.1| 159|Anopheles gambiae CED6 protein. 26 0.97
AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein. 26 0.97
AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein. 26 0.97
AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein. 26 0.97
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 25 1.7
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 2.2
AY330172-1|AAQ16278.1| 170|Anopheles gambiae odorant-binding pr... 25 2.2
U50471-1|AAA93474.1| 135|Anopheles gambiae protein ( Anopheles ... 23 9.0
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 23 9.0
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 27.1 bits (57), Expect = 0.55
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 210 DWLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQ 317
D+L P KI+D +KP+ D++ R PD K +
Sbjct: 198 DFLPPKKIKDPEAKKPE--DWDDRATIADPDDTKPE 231
Score = 23.8 bits (49), Expect = 5.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 210 DWLKPDKIRDAMKRKPDHPDYNPRTLYVPP 299
DW KP+ I D KPD D + PP
Sbjct: 232 DWDKPEHIPDPDATKPDDWDDEMDGEWEPP 261
>AY341161-1|AAR13725.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 26.2 bits (55), Expect = 0.97
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 290 IQSPRIIIWMVRFPLHRIS 234
IQ PR + M +FPLH+IS
Sbjct: 54 IQEPRSLTIMHQFPLHKIS 72
>AY341160-1|AAR13724.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 26.2 bits (55), Expect = 0.97
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 290 IQSPRIIIWMVRFPLHRIS 234
IQ PR + M +FPLH+IS
Sbjct: 54 IQEPRSLTIMHQFPLHKIS 72
>AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 26.2 bits (55), Expect = 0.97
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 290 IQSPRIIIWMVRFPLHRIS 234
IQ PR + M +FPLH+IS
Sbjct: 54 IQEPRSLTIMHQFPLHKIS 72
>AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 26.2 bits (55), Expect = 0.97
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 290 IQSPRIIIWMVRFPLHRIS 234
IQ PR + M +FPLH+IS
Sbjct: 54 IQEPRSLTIMHQFPLHKIS 72
>AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 26.2 bits (55), Expect = 0.97
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 290 IQSPRIIIWMVRFPLHRIS 234
IQ PR + M +FPLH+IS
Sbjct: 54 IQEPRSLTIMHQFPLHKIS 72
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 25.4 bits (53), Expect = 1.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -2
Query: 525 SILESKPYVRRRFQGSQSVRNHLSCRRIQVH*PQQQHPCDTIHR 394
++L S Y+ + Q Q R HL ++ H QQQ+P IHR
Sbjct: 598 TVLLSDHYLPLQQQQQQQAR-HLPQQQAIHHIHQQQYPRQVIHR 640
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 25.0 bits (52), Expect = 2.2
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +3
Query: 174 ESSDGNWVHCKLDWLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQTPAHQQWWIMKS 353
+++DGN + DW KP+ + +K +P+ + + ++K
Sbjct: 2845 KANDGNARFWEWDWSKPETVWSTLKGISSGLSISPKLNRLDKFVINKMDKIKDMKMVLKE 2904
Query: 354 TN--FDCVLFFKVGKFYEL-YHM 413
N F + KVGK ++ YH+
Sbjct: 2905 KNLKFITQIKEKVGKMKQIGYHV 2927
>AY330172-1|AAQ16278.1| 170|Anopheles gambiae odorant-binding
protein AgamOBP52 protein.
Length = 170
Score = 25.0 bits (52), Expect = 2.2
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 63 FKYEPNQTPKSNKNTKTTAGSKSKTILPEE-NPKSQEEESSDGN 191
F P Q P S K ++ +++ ++PE + K +E E+++ N
Sbjct: 16 FSKHPKQFPPSKKQSELPYCCQTEPLIPEHVSTKCKEREAANHN 59
>U50471-1|AAA93474.1| 135|Anopheles gambiae protein ( Anopheles
gambiae putativeribosomal protein S8 mRNA, complete cds.
).
Length = 135
Score = 23.0 bits (47), Expect = 9.0
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 82 KPQKVTRIPKLLLDQNQKQYYLKKTQRARRK 174
+P +V R +L+ + ++YLKK + + K
Sbjct: 105 RPGQVGRADGYILEGKELEFYLKKIKNKKSK 135
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 23.0 bits (47), Expect = 9.0
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -2
Query: 657 LDECLSSSNCPRWNNPIEVSMKQTP*LLESLCACSATAKLFCNLS 523
+ +C +S C +N EVS++ + L C +L+C+ S
Sbjct: 42 ITDC-DTSKCQPLSNISEVSLEPGQRIRRELDPCCEILRLYCDTS 85
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,983
Number of Sequences: 2352
Number of extensions: 16454
Number of successful extensions: 45
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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