Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1290
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U73737-1|AAB47425.1| 1360|Homo sapiens hMSH6 protein. 175 9e-44
U54777-1|AAB39212.2| 1360|Homo sapiens hMSH6 protein protein. 175 9e-44
U28946-1|AAC50461.1| 1360|Homo sapiens G/T mismatch binding prot... 175 9e-44
D89646-1|BAA23675.1| 1068|Homo sapiens GTBP-ALT protein. 175 9e-44
D89645-2|BAA23673.1| 1068|Homo sapiens GTBP-ALT protein. 175 9e-44
D89645-1|BAA23674.1| 1360|Homo sapiens GTBP-N protein. 175 9e-44
BC004246-1|AAH04246.1| 1360|Homo sapiens mutS homolog 6 (E. coli... 175 9e-44
AY082894-1|AAL87401.1| 1358|Homo sapiens mutS homolog 6 (E. coli... 175 9e-44
EF560715-1|ABQ59025.1| 730|Homo sapiens MTSS1 protein protein. 33 1.3
AK126989-1|BAC86779.1| 519|Homo sapiens protein ( Homo sapiens ... 33 1.3
AB007889-1|BAA24859.3| 666|Homo sapiens KIAA0429 protein. 33 1.3
AY044450-1|AAK95952.1| 1531|Homo sapiens heart alpha-kinase prot... 31 2.9
AL832018-1|CAD89922.1| 1679|Homo sapiens hypothetical protein pr... 31 2.9
AK092133-1|BAC03812.1| 1131|Homo sapiens protein ( Homo sapiens ... 31 2.9
BC034018-1|AAH34018.1| 816|Homo sapiens neuroligin 4, X-linked ... 30 8.9
AY358562-1|AAQ88925.1| 816|Homo sapiens NLGN4 protein. 30 8.9
AY358246-1|AAQ88613.1| 173|Homo sapiens PAMP6501 protein. 30 8.9
AF376803-1|AAM46112.1| 816|Homo sapiens neuroligin X protein. 30 8.9
AB033086-1|BAA86574.1| 817|Homo sapiens KIAA1260 protein protein. 30 8.9
>U73737-1|AAB47425.1| 1360|Homo sapiens hMSH6 protein.
Length = 1360
Score = 175 bits (427), Expect = 9e-44
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 11/170 (6%)
Frame = +3
Query: 66 KYEPNQTPKSNKNTKTTAGSKSKTIL----PEENPKSQEEESSDGN-------WVHCKLD 212
K +TP + K T+ S++K L +N +SQ S G+ W H L+
Sbjct: 313 KSSRKETPSATKQA-TSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETLE 371
Query: 213 WLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQTPAHQQWWIMKSTNFDCVLFFKVGK 392
WLK +K RD +R+PDHPD++ TLYVP DFL S TP ++WW +KS NFD V+ +KVGK
Sbjct: 372 WLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVGK 431
Query: 393 FYELYHMDAAVGVNELGFSYMKGDFAHSGFPESAYGRMASTLVSKGYKIA 542
FYELYHMDA +GV+ELG +MKG++AHSGFPE A+GR + +LV KGYK+A
Sbjct: 432 FYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA 481
Score = 64.9 bits (151), Expect = 3e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 554 EQAHNDSSSYGVCFIDTSIGLFHLGQFEDDKHSSRLLTTLAHYPP 688
E + + +YGVCF+DTS+G F +GQF DD+H SR T +AHYPP
Sbjct: 547 EDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPP 591
>U54777-1|AAB39212.2| 1360|Homo sapiens hMSH6 protein protein.
Length = 1360
Score = 175 bits (427), Expect = 9e-44
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 11/170 (6%)
Frame = +3
Query: 66 KYEPNQTPKSNKNTKTTAGSKSKTIL----PEENPKSQEEESSDGN-------WVHCKLD 212
K +TP + K T+ S++K L +N +SQ S G+ W H L+
Sbjct: 313 KSSRKETPSATKQA-TSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETLE 371
Query: 213 WLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQTPAHQQWWIMKSTNFDCVLFFKVGK 392
WLK +K RD +R+PDHPD++ TLYVP DFL S TP ++WW +KS NFD V+ +KVGK
Sbjct: 372 WLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVGK 431
Query: 393 FYELYHMDAAVGVNELGFSYMKGDFAHSGFPESAYGRMASTLVSKGYKIA 542
FYELYHMDA +GV+ELG +MKG++AHSGFPE A+GR + +LV KGYK+A
Sbjct: 432 FYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA 481
Score = 64.9 bits (151), Expect = 3e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 554 EQAHNDSSSYGVCFIDTSIGLFHLGQFEDDKHSSRLLTTLAHYPP 688
E + + +YGVCF+DTS+G F +GQF DD+H SR T +AHYPP
Sbjct: 547 EDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPP 591
>U28946-1|AAC50461.1| 1360|Homo sapiens G/T mismatch binding protein
protein.
Length = 1360
Score = 175 bits (427), Expect = 9e-44
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 11/170 (6%)
Frame = +3
Query: 66 KYEPNQTPKSNKNTKTTAGSKSKTIL----PEENPKSQEEESSDGN-------WVHCKLD 212
K +TP + K T+ S++K L +N +SQ S G+ W H L+
Sbjct: 313 KSSRKETPSATKQA-TSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETLE 371
Query: 213 WLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQTPAHQQWWIMKSTNFDCVLFFKVGK 392
WLK +K RD +R+PDHPD++ TLYVP DFL S TP ++WW +KS NFD V+ +KVGK
Sbjct: 372 WLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVGK 431
Query: 393 FYELYHMDAAVGVNELGFSYMKGDFAHSGFPESAYGRMASTLVSKGYKIA 542
FYELYHMDA +GV+ELG +MKG++AHSGFPE A+GR + +LV KGYK+A
Sbjct: 432 FYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA 481
Score = 64.9 bits (151), Expect = 3e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 554 EQAHNDSSSYGVCFIDTSIGLFHLGQFEDDKHSSRLLTTLAHYPP 688
E + + +YGVCF+DTS+G F +GQF DD+H SR T +AHYPP
Sbjct: 547 EDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPP 591
>D89646-1|BAA23675.1| 1068|Homo sapiens GTBP-ALT protein.
Length = 1068
Score = 175 bits (427), Expect = 9e-44
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 11/170 (6%)
Frame = +3
Query: 66 KYEPNQTPKSNKNTKTTAGSKSKTIL----PEENPKSQEEESSDGN-------WVHCKLD 212
K +TP + K T+ S++K L +N +SQ S G+ W H L+
Sbjct: 313 KSSRKETPSATKQA-TSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETLE 371
Query: 213 WLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQTPAHQQWWIMKSTNFDCVLFFKVGK 392
WLK +K RD +R+PDHPD++ TLYVP DFL S TP ++WW +KS NFD V+ +KVGK
Sbjct: 372 WLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVGK 431
Query: 393 FYELYHMDAAVGVNELGFSYMKGDFAHSGFPESAYGRMASTLVSKGYKIA 542
FYELYHMDA +GV+ELG +MKG++AHSGFPE A+GR + +LV KGYK+A
Sbjct: 432 FYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA 481
Score = 64.9 bits (151), Expect = 3e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 554 EQAHNDSSSYGVCFIDTSIGLFHLGQFEDDKHSSRLLTTLAHYPP 688
E + + +YGVCF+DTS+G F +GQF DD+H SR T +AHYPP
Sbjct: 547 EDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPP 591
>D89645-2|BAA23673.1| 1068|Homo sapiens GTBP-ALT protein.
Length = 1068
Score = 175 bits (427), Expect = 9e-44
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 11/170 (6%)
Frame = +3
Query: 66 KYEPNQTPKSNKNTKTTAGSKSKTIL----PEENPKSQEEESSDGN-------WVHCKLD 212
K +TP + K T+ S++K L +N +SQ S G+ W H L+
Sbjct: 313 KSSRKETPSATKQA-TSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETLE 371
Query: 213 WLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQTPAHQQWWIMKSTNFDCVLFFKVGK 392
WLK +K RD +R+PDHPD++ TLYVP DFL S TP ++WW +KS NFD V+ +KVGK
Sbjct: 372 WLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVGK 431
Query: 393 FYELYHMDAAVGVNELGFSYMKGDFAHSGFPESAYGRMASTLVSKGYKIA 542
FYELYHMDA +GV+ELG +MKG++AHSGFPE A+GR + +LV KGYK+A
Sbjct: 432 FYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA 481
Score = 64.9 bits (151), Expect = 3e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 554 EQAHNDSSSYGVCFIDTSIGLFHLGQFEDDKHSSRLLTTLAHYPP 688
E + + +YGVCF+DTS+G F +GQF DD+H SR T +AHYPP
Sbjct: 547 EDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPP 591
>D89645-1|BAA23674.1| 1360|Homo sapiens GTBP-N protein.
Length = 1360
Score = 175 bits (427), Expect = 9e-44
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 11/170 (6%)
Frame = +3
Query: 66 KYEPNQTPKSNKNTKTTAGSKSKTIL----PEENPKSQEEESSDGN-------WVHCKLD 212
K +TP + K T+ S++K L +N +SQ S G+ W H L+
Sbjct: 313 KSSRKETPSATKQA-TSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETLE 371
Query: 213 WLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQTPAHQQWWIMKSTNFDCVLFFKVGK 392
WLK +K RD +R+PDHPD++ TLYVP DFL S TP ++WW +KS NFD V+ +KVGK
Sbjct: 372 WLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVGK 431
Query: 393 FYELYHMDAAVGVNELGFSYMKGDFAHSGFPESAYGRMASTLVSKGYKIA 542
FYELYHMDA +GV+ELG +MKG++AHSGFPE A+GR + +LV KGYK+A
Sbjct: 432 FYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA 481
Score = 64.9 bits (151), Expect = 3e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 554 EQAHNDSSSYGVCFIDTSIGLFHLGQFEDDKHSSRLLTTLAHYPP 688
E + + +YGVCF+DTS+G F +GQF DD+H SR T +AHYPP
Sbjct: 547 EDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPP 591
>BC004246-1|AAH04246.1| 1360|Homo sapiens mutS homolog 6 (E. coli)
protein.
Length = 1360
Score = 175 bits (427), Expect = 9e-44
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 11/170 (6%)
Frame = +3
Query: 66 KYEPNQTPKSNKNTKTTAGSKSKTIL----PEENPKSQEEESSDGN-------WVHCKLD 212
K +TP + K T+ S++K L +N +SQ S G+ W H L+
Sbjct: 313 KSSRKETPSATKQA-TSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETLE 371
Query: 213 WLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQTPAHQQWWIMKSTNFDCVLFFKVGK 392
WLK +K RD +R+PDHPD++ TLYVP DFL S TP ++WW +KS NFD V+ +KVGK
Sbjct: 372 WLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVGK 431
Query: 393 FYELYHMDAAVGVNELGFSYMKGDFAHSGFPESAYGRMASTLVSKGYKIA 542
FYELYHMDA +GV+ELG +MKG++AHSGFPE A+GR + +LV KGYK+A
Sbjct: 432 FYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA 481
Score = 64.9 bits (151), Expect = 3e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 554 EQAHNDSSSYGVCFIDTSIGLFHLGQFEDDKHSSRLLTTLAHYPP 688
E + + +YGVCF+DTS+G F +GQF DD+H SR T +AHYPP
Sbjct: 547 EDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPP 591
>AY082894-1|AAL87401.1| 1358|Homo sapiens mutS homolog 6 (E. coli)
protein.
Length = 1358
Score = 175 bits (427), Expect = 9e-44
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 11/170 (6%)
Frame = +3
Query: 66 KYEPNQTPKSNKNTKTTAGSKSKTIL----PEENPKSQEEESSDGN-------WVHCKLD 212
K +TP + K T+ S++K L +N +SQ S G+ W H L+
Sbjct: 313 KSSRKETPSATKQA-TSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETLE 371
Query: 213 WLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQTPAHQQWWIMKSTNFDCVLFFKVGK 392
WLK +K RD +R+PDHPD++ TLYVP DFL S TP ++WW +KS NFD V+ +KVGK
Sbjct: 372 WLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVGK 431
Query: 393 FYELYHMDAAVGVNELGFSYMKGDFAHSGFPESAYGRMASTLVSKGYKIA 542
FYELYHMDA +GV+ELG +MKG++AHSGFPE A+GR + +LV KGYK+A
Sbjct: 432 FYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA 481
Score = 64.9 bits (151), Expect = 3e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 554 EQAHNDSSSYGVCFIDTSIGLFHLGQFEDDKHSSRLLTTLAHYPP 688
E + + +YGVCF+DTS+G F +GQF DD+H SR T +AHYPP
Sbjct: 547 EDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPP 591
>EF560715-1|ABQ59025.1| 730|Homo sapiens MTSS1 protein protein.
Length = 730
Score = 32.7 bits (71), Expect = 1.3
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Frame = +3
Query: 54 QDSFKYE-PNQTPKS--NKNTKTTAGSKS----KTILPEENPKSQEEESSDGNWVHCKLD 212
QD+F+ + P+ P N+N+ ++A S++ +++ +P S S+ G WV + D
Sbjct: 327 QDAFQSKSPSPMPPEAPNQNSSSSASSEASETCQSVSECSSPTSVSSGSTMGAWVSTEKD 386
Query: 213 WLKPDKI---------RDAMKRKPDHPDYNPRTLYVPP 299
W KP R KR+PD P T PP
Sbjct: 387 WAKPGPYDQPLVNTLQRRKEKREPDPNGGGPTTASGPP 424
>AK126989-1|BAC86779.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ45044 fis, clone BRAWH3021574. ).
Length = 519
Score = 32.7 bits (71), Expect = 1.3
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Frame = +3
Query: 54 QDSFKYE-PNQTPKS--NKNTKTTAGSKS----KTILPEENPKSQEEESSDGNWVHCKLD 212
QD+F+ + P+ P N+N+ ++A S++ +++ +P S S+ G WV + D
Sbjct: 116 QDAFQSKSPSPMPPEAPNQNSSSSASSEASETCQSVSECSSPTSVSSGSTMGAWVSTEKD 175
Query: 213 WLKPDKI---------RDAMKRKPDHPDYNPRTLYVPP 299
W KP R KR+PD P T PP
Sbjct: 176 WAKPGPYDQPLVNTLQRRKEKREPDPNGGGPTTASGPP 213
>AB007889-1|BAA24859.3| 666|Homo sapiens KIAA0429 protein.
Length = 666
Score = 32.7 bits (71), Expect = 1.3
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Frame = +3
Query: 54 QDSFKYE-PNQTPKS--NKNTKTTAGSKS----KTILPEENPKSQEEESSDGNWVHCKLD 212
QD+F+ + P+ P N+N+ ++A S++ +++ +P S S+ G WV + D
Sbjct: 263 QDAFQSKSPSPMPPEAPNQNSSSSASSEASETCQSVSECSSPTSVSSGSTMGAWVSTEKD 322
Query: 213 WLKPDKI---------RDAMKRKPDHPDYNPRTLYVPP 299
W KP R KR+PD P T PP
Sbjct: 323 WAKPGPYDQPLVNTLQRRKEKREPDPNGGGPTTASGPP 360
>AY044450-1|AAK95952.1| 1531|Homo sapiens heart alpha-kinase
protein.
Length = 1531
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 51 LQDSFKYEPNQTPKSNKNTKTTAGSKSKTILPEENPKSQEEESSDGNWVHCKLDWLKPDK 230
L++S +Y P NK T + + I P + E ++SDG + W PD
Sbjct: 580 LEESKEYRPGNWEAGNKLKIITLEASASEIWPPRQLTNSESKASDGGLIIPDKVWAVPDS 639
Query: 231 IR 236
++
Sbjct: 640 LK 641
>AL832018-1|CAD89922.1| 1679|Homo sapiens hypothetical protein
protein.
Length = 1679
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 51 LQDSFKYEPNQTPKSNKNTKTTAGSKSKTILPEENPKSQEEESSDGNWVHCKLDWLKPDK 230
L++S +Y P NK T + + I P + E ++SDG + W PD
Sbjct: 728 LEESKEYRPGNWEAGNKLKIITLEASASEIWPPRQLTNSESKASDGGLIIPDKVWAVPDS 787
Query: 231 IR 236
++
Sbjct: 788 LK 789
>AK092133-1|BAC03812.1| 1131|Homo sapiens protein ( Homo sapiens
cDNA FLJ34814 fis, clone NT2NE2007727. ).
Length = 1131
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 51 LQDSFKYEPNQTPKSNKNTKTTAGSKSKTILPEENPKSQEEESSDGNWVHCKLDWLKPDK 230
L++S +Y P NK T + + I P + E ++SDG + W PD
Sbjct: 580 LEESKEYRPGNWEAGNKLKIITLEASASEIWPPRQLTNSESKASDGGLIIPDKVWAVPDS 639
Query: 231 IR 236
++
Sbjct: 640 LK 641
>BC034018-1|AAH34018.1| 816|Homo sapiens neuroligin 4, X-linked
protein.
Length = 816
Score = 29.9 bits (64), Expect = 8.9
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 54 QDSFKYEPNQTPKSNKNTKTT-AGSKSKTILPEENPKSQEEESSDGNWVHCKLDWLKPDK 230
+D ++E ++ P +NT A +++ I+ + + + + + H L P
Sbjct: 700 KDKRRHETHRRPSPQRNTTNDIAHIQNEEIMSLQMKQLEHDHECESLQAHDTLRLTCPPD 759
Query: 231 IRDAMKRKPDH-PDYNPRTLYVPPDFLKSQTPAH 329
++R PD P P T+ + P+ L P H
Sbjct: 760 YTLTLRRSPDDIPLMTPNTITMIPNTLTGMQPLH 793
>AY358562-1|AAQ88925.1| 816|Homo sapiens NLGN4 protein.
Length = 816
Score = 29.9 bits (64), Expect = 8.9
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 54 QDSFKYEPNQTPKSNKNTKTT-AGSKSKTILPEENPKSQEEESSDGNWVHCKLDWLKPDK 230
+D ++E ++ P +NT A +++ I+ + + + + + H L P
Sbjct: 700 KDKRRHETHRRPSPQRNTTNDIAHIQNEEIMSLQMKQLEHDHECESLQAHDTLRLTCPPD 759
Query: 231 IRDAMKRKPDH-PDYNPRTLYVPPDFLKSQTPAH 329
++R PD P P T+ + P+ L P H
Sbjct: 760 YTLTLRRSPDDIPLMTPNTITMIPNTLTGMQPLH 793
>AY358246-1|AAQ88613.1| 173|Homo sapiens PAMP6501 protein.
Length = 173
Score = 29.9 bits (64), Expect = 8.9
Identities = 24/89 (26%), Positives = 36/89 (40%)
Frame = -2
Query: 678 CASVVRSLDECLSSSNCPRWNNPIEVSMKQTP*LLESLCACSATAKLFCNLSILESKPYV 499
C S+ + + +S P ++P + + P +L S TA L +LSIL S
Sbjct: 47 CESIFKFIQNPFTSHYFP-CSHPSQGKQRVHPRILYSFPTIFPTASLVPHLSILFSAQQP 105
Query: 498 RRRFQGSQSVRNHLSCRRIQVH*PQQQHP 412
R FQ +H S H Q+ P
Sbjct: 106 ERSFQRMSPTMSHFSKLSSPCHSEQRSTP 134
>AF376803-1|AAM46112.1| 816|Homo sapiens neuroligin X protein.
Length = 816
Score = 29.9 bits (64), Expect = 8.9
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 54 QDSFKYEPNQTPKSNKNTKTT-AGSKSKTILPEENPKSQEEESSDGNWVHCKLDWLKPDK 230
+D ++E ++ P +NT A +++ I+ + + + + + H L P
Sbjct: 700 KDKRRHETHRRPSPQRNTTNDIAHIQNEEIMSLQMKQLEHDHECESLQAHDTLRLTCPPD 759
Query: 231 IRDAMKRKPDH-PDYNPRTLYVPPDFLKSQTPAH 329
++R PD P P T+ + P+ L P H
Sbjct: 760 YTLTLRRSPDDIPLMTPNTITMIPNTLTGMQPLH 793
>AB033086-1|BAA86574.1| 817|Homo sapiens KIAA1260 protein protein.
Length = 817
Score = 29.9 bits (64), Expect = 8.9
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 54 QDSFKYEPNQTPKSNKNTKTT-AGSKSKTILPEENPKSQEEESSDGNWVHCKLDWLKPDK 230
+D ++E ++ P +NT A +++ I+ + + + + + H L P
Sbjct: 701 KDKRRHETHRRPSPQRNTTNDIAHIQNEEIMSLQMKQLEHDHECESLQAHDTLRLTCPPD 760
Query: 231 IRDAMKRKPDH-PDYNPRTLYVPPDFLKSQTPAH 329
++R PD P P T+ + P+ L P H
Sbjct: 761 YTLTLRRSPDDIPLMTPNTITMIPNTLTGMQPLH 794
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,356,700
Number of Sequences: 237096
Number of extensions: 2260136
Number of successful extensions: 5480
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5477
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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