Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1289
(700 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P53618 Cluster: Coatomer subunit beta; n=58; Eukaryota|... 290 2e-77
UniRef50_A6QWQ7 Cluster: Coatomer beta subunit; n=12; Dikarya|Re... 225 1e-57
UniRef50_Q9SV21 Cluster: Coatomer subunit beta-1; n=88; Viridipl... 220 2e-56
UniRef50_A4RW30 Cluster: Predicted protein; n=2; Ostreococcus|Re... 215 7e-55
UniRef50_A3M067 Cluster: Predicted protein; n=3; Ascomycota|Rep:... 193 3e-48
UniRef50_Q23924 Cluster: Probable coatomer subunit beta; n=3; Di... 191 2e-47
UniRef50_P41810 Cluster: Coatomer subunit beta; n=16; Ascomycota... 188 1e-46
UniRef50_Q9UUF7 Cluster: Coatomer subunit beta; n=1; Schizosacch... 181 1e-44
UniRef50_Q9U4N3 Cluster: Beta coatomer; n=1; Toxoplasma gondii|R... 177 2e-43
UniRef50_A0BYB4 Cluster: Chromosome undetermined scaffold_136, w... 144 2e-33
UniRef50_Q4GYW5 Cluster: Coatomer beta subunit; n=2; Trypanosoma... 142 6e-33
UniRef50_Q4QCR1 Cluster: Coatomer beta subunit, putative; n=4; T... 141 2e-32
UniRef50_Q1EQ38 Cluster: Beta2-COP; n=2; Entamoeba histolytica|R... 130 4e-29
UniRef50_Q23JD9 Cluster: Adaptin N terminal region family protei... 128 2e-28
UniRef50_Q8ILG6 Cluster: Coatamer protein, beta subunit, putativ... 125 1e-27
UniRef50_Q1EQ39 Cluster: Beta1-COP; n=1; Entamoeba histolytica|R... 122 6e-27
UniRef50_A5K0V2 Cluster: Coatamer protein, beta subunit, putativ... 122 1e-26
UniRef50_Q7RQ31 Cluster: Coatomer beta subunit; n=4; Plasmodium ... 114 2e-24
UniRef50_A3FQR5 Cluster: Putative uncharacterized protein; n=3; ... 109 6e-23
UniRef50_A2DHS1 Cluster: Adaptin N terminal region family protei... 93 8e-18
UniRef50_Q7R211 Cluster: GLP_163_4671_7817; n=1; Giardia lamblia... 91 2e-17
UniRef50_Q8SRB1 Cluster: COATOMER COMPLEX BETA SUBUNIT; n=1; Enc... 89 1e-16
UniRef50_Q4N7Y3 Cluster: Coatomer beta subunit, putative; n=1; T... 88 2e-16
UniRef50_Q5DAU2 Cluster: SJCHGC04770 protein; n=1; Schistosoma j... 75 2e-12
UniRef50_A7AS75 Cluster: Coatamer beta subunit, putative; n=1; B... 73 7e-12
UniRef50_Q6E6I0 Cluster: Coatomer complex beta subunit; n=1; Ant... 71 4e-11
UniRef50_Q4UHM1 Cluster: Coatamer, beta subunit, putative; n=1; ... 70 6e-11
UniRef50_A0LBV0 Cluster: Methyl-accepting chemotaxis sensory tra... 39 0.10
UniRef50_Q3JRH4 Cluster: Putative uncharacterized protein; n=3; ... 36 1.3
UniRef50_A6RJY2 Cluster: Putative uncharacterized protein; n=2; ... 36 1.3
UniRef50_UPI0000566A7A Cluster: adaptor-related protein complex ... 35 1.7
UniRef50_Q51763 Cluster: IS1162 DNA; n=4; Pseudomonas|Rep: IS116... 35 1.7
UniRef50_Q1D8M5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_A0VIT9 Cluster: Major facilitator superfamily MFS_1; n=... 34 3.9
UniRef50_UPI0000E2510B Cluster: PREDICTED: hypothetical protein;... 33 6.7
UniRef50_A3VVQ1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q8U256 Cluster: Type II secretion system protein; n=3; ... 33 6.7
UniRef50_Q9UPM8 Cluster: AP-4 complex subunit epsilon-1; n=29; E... 33 6.7
UniRef50_UPI0000DB7FFD Cluster: PREDICTED: similar to CG18497-PA... 33 8.9
UniRef50_Q21DY5 Cluster: Sensor protein; n=1; Saccharophagus deg... 33 8.9
UniRef50_A4NVU6 Cluster: Hypothetical tRNA/rRNA methyltransferas... 33 8.9
UniRef50_A3PUX6 Cluster: Acyl-CoA dehydrogenase, type 2, C-termi... 33 8.9
UniRef50_A4ICM4 Cluster: Ribosomal protein L24, putative; n=1; L... 33 8.9
UniRef50_O13921 Cluster: MutS protein homolog 1; n=3; Schizosacc... 33 8.9
>UniRef50_P53618 Cluster: Coatomer subunit beta; n=58; Eukaryota|Rep:
Coatomer subunit beta - Homo sapiens (Human)
Length = 953
Score = 290 bits (712), Expect = 2e-77
Identities = 138/229 (60%), Positives = 178/229 (77%), Gaps = 2/229 (0%)
Frame = +1
Query: 19 EDVDKEREPKRQEQKVEIETGITFSQLAGAGASGSQHDMFELALNKALQGRSGGEAID-- 192
E + +++E +++ V+ + I+F QL + D F+L+L A+ EA D
Sbjct: 650 EKLSQKKESEKRNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPL 709
Query: 193 RGKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLV 372
KL +V QLTG SDPVYAEA V VNQYDIVLDVL+VNQT DTLQNC +ELATLG+L+LV
Sbjct: 710 ASKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLV 769
Query: 373 ERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDF 552
E+ + + LAP DFA+++A+VKVASTENG+IFGN+VY+V+GA+ DR VVL+DIHIDI+D+
Sbjct: 770 EKPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDY 829
Query: 553 IQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
IQPA C+DA+FRQMWAEFEWENKV+VNTNM DL++YLQH+L TNMKCL
Sbjct: 830 IQPATCTDAEFRQMWAEFEWENKVTVNTNMVDLNDYLQHILKSTNMKCL 878
>UniRef50_A6QWQ7 Cluster: Coatomer beta subunit; n=12; Dikarya|Rep:
Coatomer beta subunit - Ajellomyces capsulatus NAm1
Length = 956
Score = 225 bits (549), Expect = 1e-57
Identities = 120/228 (52%), Positives = 153/228 (67%), Gaps = 4/228 (1%)
Frame = +1
Query: 28 DKEREPKRQEQK----VEIETGITFSQLAGAGASGSQHDMFELALNKALQGRSGGEAIDR 195
+K+R K ++K V+++ I QLA A D EL L KA G S E +
Sbjct: 662 EKKRAAKEADEKAKAAVQVDDTIPIRQLAKKSAEEGA-DEIELDLAKATGGDSAYEDLS- 719
Query: 196 GKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVE 375
KL RV QLTG SDPVYAEA V V+Q+DIVLDVLLVNQT +TLQN VE ATLG+L++VE
Sbjct: 720 SKLSRVVQLTGFSDPVYAEAYVKVHQFDIVLDVLLVNQTTETLQNLSVEFATLGDLKVVE 779
Query: 376 RAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFI 555
R L P DF +++A VKV+ST+ GVIFGNVVY+ +S + VV+LNDI DI+D+I
Sbjct: 780 RPTTQNLGPHDFLNVQATVKVSSTDTGVIFGNVVYD-GASSTETHVVILNDIKADIMDYI 838
Query: 556 QPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
PAHC+++ FR MW EFEWENKV++N+ L E+L L+ TNM CL
Sbjct: 839 HPAHCTESQFRTMWTEFEWENKVNINSKAKSLREFLSQLMESTNMSCL 886
>UniRef50_Q9SV21 Cluster: Coatomer subunit beta-1; n=88;
Viridiplantae|Rep: Coatomer subunit beta-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 948
Score = 220 bits (538), Expect = 2e-56
Identities = 103/170 (60%), Positives = 131/170 (77%)
Frame = +1
Query: 190 DRGKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRL 369
D KL R+ QLTG SDPVYAEA V+V+ YDI L+V ++N+T +TLQN C+ELAT+G+L+L
Sbjct: 710 DANKLNRILQLTGFSDPVYAEAYVTVHHYDIALEVTVINRTKETLQNLCLELATMGDLKL 769
Query: 370 VERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVD 549
VER LAP ++A++KV+STE GVIFGN+VYE T M+R VVVLNDIHIDI+D
Sbjct: 770 VERPQNYSLAPERSMQIKANIKVSSTETGVIFGNIVYE-TSNVMERNVVVLNDIHIDIMD 828
Query: 550 FIQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
+I PA CS+ FR MWAEFEWENKV+VNT + + E+L H++ TNMKCL
Sbjct: 829 YISPAVCSEVAFRTMWAEFEWENKVAVNTTIQNEREFLDHIIKSTNMKCL 878
>UniRef50_A4RW30 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 936
Score = 215 bits (526), Expect = 7e-55
Identities = 102/166 (61%), Positives = 128/166 (77%)
Frame = +1
Query: 202 LCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVERA 381
L RV QLTG SD VYAE V+V+QYDI LDV ++N+TD+ LQN +EL+T+G+L+LVER
Sbjct: 704 LDRVMQLTGLSDTVYAETYVTVHQYDITLDVTMINRTDEPLQNVMLELSTMGDLKLVERP 763
Query: 382 AEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQP 561
L P +LRA +KV+STE GVIFGN+VYE A DR V+VLND+HIDI+D+I P
Sbjct: 764 QPFSLPPFGSHNLRASIKVSSTETGVIFGNIVYET--ARSDRNVIVLNDVHIDIMDYIIP 821
Query: 562 AHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
A CSD FR MWAEFEWENKV+V+TN+TD+ +YL H++ TNMKCL
Sbjct: 822 ATCSDTVFRSMWAEFEWENKVAVSTNITDVRKYLDHIVTSTNMKCL 867
>UniRef50_A3M067 Cluster: Predicted protein; n=3; Ascomycota|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 947
Score = 193 bits (471), Expect = 3e-48
Identities = 101/230 (43%), Positives = 143/230 (62%), Gaps = 4/230 (1%)
Frame = +1
Query: 22 DVDKEREPKRQ--EQKVEIETGITFSQLAGAGASGSQH-DMFELALNKALQGRSGGEAID 192
++ K E R E +++ I F Q A+ S D LA AL+
Sbjct: 648 ELKKAEEQARDFHENAEQVDGSIVFRQFDKDNAAKSAAVDDVSLASGSALKKEDLSS--- 704
Query: 193 RGKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLV 372
+L ++ QLTG SDP+YAEA V V+QYD+ LDVLLVNQT TL+N +E ATLG+L++V
Sbjct: 705 --RLNKILQLTGFSDPIYAEAFVKVHQYDVTLDVLLVNQTTATLRNLSIEFATLGDLKVV 762
Query: 373 ERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRG-VVVLNDIHIDIVD 549
++ A + P F ++ VKV S + GVIFGN+VY+ G D +V+LND+H+DI+D
Sbjct: 763 DKPATANVGPHGFYKIQTTVKVTSADTGVIFGNIVYD--GQHSDESTIVILNDVHVDIMD 820
Query: 550 FIQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
+I+PA CS++ FR+MW EFEWENK+++ + + L EYL L+ TNM CL
Sbjct: 821 YIKPATCSESQFRKMWNEFEWENKITIKSQIPTLKEYLDELMKGTNMNCL 870
>UniRef50_Q23924 Cluster: Probable coatomer subunit beta; n=3;
Dictyostelium discoideum|Rep: Probable coatomer subunit
beta - Dictyostelium discoideum (Slime mold)
Length = 400
Score = 191 bits (465), Expect = 2e-47
Identities = 102/231 (44%), Positives = 149/231 (64%), Gaps = 8/231 (3%)
Frame = +1
Query: 31 KEREPKRQEQK---VEIETGITFSQLAGAGASGSQHDMFELALNKALQGRSGGEAIDRGK 201
K+ E K++ +K V+ I QL A G +L KA+ G +G D+ +
Sbjct: 104 KQSENKKKTEKEVLVKPNNIINIRQLKSKKAFGPVDTEDDLI--KAV-GNTGEANKDQNE 160
Query: 202 LCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVERA 381
++ QL+G SDP+Y EA V V+QYDIVLD+ + NQT+DTLQN +EL TLG+L++ ER
Sbjct: 161 YSKISQLSGFSDPIYVEAYVRVHQYDIVLDISVFNQTNDTLQNVTLELVTLGDLKICERV 220
Query: 382 AEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTG--ASM-DRGVVVLNDIHIDIVDF 552
+APR+ S +A +KV+ST+NGVI G + +++ G +SM D+ V+LN++HID++D+
Sbjct: 221 PPFTMAPREKTSAKASIKVSSTDNGVIMGTIAFDIAGSVSSMSDKNCVILNELHIDVIDY 280
Query: 553 IQPAH--CSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
I PA+ +D FR W EFEWENK+ VNTN+TDL +Y+ H+ TNM L
Sbjct: 281 ILPANHQYTDVLFRNHWLEFEWENKIPVNTNITDLVKYVHHISKVTNMGIL 331
>UniRef50_P41810 Cluster: Coatomer subunit beta; n=16; Ascomycota|Rep:
Coatomer subunit beta - Saccharomyces cerevisiae (Baker's
yeast)
Length = 973
Score = 188 bits (458), Expect = 1e-46
Identities = 96/213 (45%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Frame = +1
Query: 70 IETGITFSQLAGAGASGSQHDMFELALNKALQGRS--GGEAIDRGKLCRVRQLTGCSDPV 243
I+T I+F Q AG ++ Q D E L A++G + + KL ++ L G SDPV
Sbjct: 684 IDTPISFRQFAGVDSTNVQKDSIEEDLQLAMKGDAIHATSSSSISKLKKIVPLCGFSDPV 743
Query: 244 YAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVERAAEVVLAPRDFASLR 423
YAEA ++ NQ+D+VLDVLLVNQT +TL+N V+ ATLG+L++++ + + P F
Sbjct: 744 YAEACITNNQFDVVLDVLLVNQTKETLKNLHVQFATLGDLKIIDTPQKTNVIPHGFHKFT 803
Query: 424 AHVKVASTENGVIFGNVVYEVTGA-SMDRGVVVLNDIHIDIVDFIQPAHCSDADFRQMWA 600
VKV+S + GVIFGN++Y+ GA D V+LND+H+DI+D+I+PA D FR MW
Sbjct: 804 VTVKVSSADTGVIFGNIIYD--GAHGEDARYVILNDVHVDIMDYIKPATADDEHFRTMWN 861
Query: 601 EFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
FEWENK+SV + + LH YL+ L+ TNM L
Sbjct: 862 AFEWENKISVKSQLPTLHAYLRELVKGTNMGIL 894
>UniRef50_Q9UUF7 Cluster: Coatomer subunit beta; n=1;
Schizosaccharomyces pombe|Rep: Coatomer subunit beta -
Schizosaccharomyces pombe (Fission yeast)
Length = 940
Score = 181 bits (441), Expect = 1e-44
Identities = 88/183 (48%), Positives = 127/183 (69%), Gaps = 3/183 (1%)
Frame = +1
Query: 160 LQGRSGGEAID--RGKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNC 333
+Q + G ++ KL + QL G +DPVY EA V + Q+DI+LD+LLVN+TD TLQN
Sbjct: 697 IQATNDGMVVEDLASKLDHIVQLAGFTDPVYCEAYVKIQQFDIILDILLVNRTDTTLQNL 756
Query: 334 CVELATLGELRLVERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGV 513
V+LATLG+L++VER + L P F S++A VKV+STE+ VIFGN+VY + D+ +
Sbjct: 757 SVDLATLGDLKVVERPPPMNLGPHAFKSVQATVKVSSTESAVIFGNIVYGGKASDEDK-I 815
Query: 514 VVLNDIHIDIVDFIQPAHCSDADFRQMWAEFEWENKVSVNTNM-TDLHEYLQHLLAFTNM 690
VVLN I ++I+D+I+PA ++ FR MW EFEWENKV +++N L+++L ++ TNM
Sbjct: 816 VVLNGIPVNIIDYIKPAFIPESQFRSMWTEFEWENKVDISSNEDISLYDFLHKIMKKTNM 875
Query: 691 KCL 699
CL
Sbjct: 876 NCL 878
>UniRef50_Q9U4N3 Cluster: Beta coatomer; n=1; Toxoplasma gondii|Rep:
Beta coatomer - Toxoplasma gondii
Length = 1103
Score = 177 bits (431), Expect = 2e-43
Identities = 86/178 (48%), Positives = 126/178 (70%), Gaps = 5/178 (2%)
Frame = +1
Query: 172 SGGEAID-----RGKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCC 336
SGG A D + +L +V+ +TG +DP+Y EA + VNQ+D+++++L+VN+T D+LQN
Sbjct: 808 SGGNAKDDAALFQQRLAKVQPITGQADPLYVEAFLQVNQFDLLVEMLVVNRTQDSLQNVT 867
Query: 337 VELATLGELRLVERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVV 516
VE +T G+L+LVER A V LAP A L A +KV STE G+I G V + G+S D+ +
Sbjct: 868 VEPSTHGDLKLVERPAPVSLAPGQQAVLHAPIKVRSTEAGIILGYVTFSRRGSS-DKECL 926
Query: 517 VLNDIHIDIVDFIQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNM 690
VLN++HID++D+I+ + FR MWAEFEWENK+ VNT+ TD+ E+L+HL+ TN+
Sbjct: 927 VLNELHIDVLDYIERRWTCELAFRSMWAEFEWENKIHVNTSFTDVSEFLEHLMKMTNL 984
>UniRef50_A0BYB4 Cluster: Chromosome undetermined scaffold_136, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_136, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 907
Score = 144 bits (349), Expect = 2e-33
Identities = 66/158 (41%), Positives = 105/158 (66%)
Frame = +1
Query: 199 KLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVER 378
+L + QLTG DP+YAEA V+V++YDI +VL+VN+ +QN VE T GE +++E+
Sbjct: 676 RLGHIVQLTGYCDPIYAEAFVNVHKYDIQFEVLMVNRWSKMVQNVQVEFRTQGESKVIEK 735
Query: 379 AAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQ 558
A V+L P A +R +K +S + GV++G + YE A +++ +V +I++D++DFI
Sbjct: 736 AQGVILQPNQSARVRTTIKFSSQDIGVVYGAIHYE-NNAGIEQAYLVTKEINVDLIDFII 794
Query: 559 PAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHL 672
PA S FR+ WA++EWEN++ +NTN D +Y+Q L
Sbjct: 795 PATVSIEQFRKFWAKYEWENRIVINTNQNDPFKYVQFL 832
>UniRef50_Q4GYW5 Cluster: Coatomer beta subunit; n=2; Trypanosoma
brucei|Rep: Coatomer beta subunit - Trypanosoma brucei
Length = 982
Score = 142 bits (345), Expect = 6e-33
Identities = 65/167 (38%), Positives = 107/167 (64%)
Frame = +1
Query: 199 KLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVER 378
KL + L+G DP+Y EA V+V+Q+DI +D + N T + L++ +EL LG ++L ER
Sbjct: 735 KLEKTVPLSGFCDPLYCEASVTVHQFDITVDWYIANCTANVLRDVSIELTPLGSMKLCER 794
Query: 379 AAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQ 558
+ P +R +KV S E GVI +V+YE G +RG VVLN++ +DI+++++
Sbjct: 795 PQVHTIQPHGSVRIRTALKVGSPETGVICASVLYE--GPQNERGCVVLNNVRVDIMNYVR 852
Query: 559 PAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
PA CS ++FR W +++WEN V++ T TD+ EY+++++ TN + L
Sbjct: 853 PAKCSASEFRDKWCKYDWENAVAIRTEKTDMREYVEYVMQGTNTRLL 899
>UniRef50_Q4QCR1 Cluster: Coatomer beta subunit, putative; n=4;
Trypanosomatidae|Rep: Coatomer beta subunit, putative -
Leishmania major
Length = 999
Score = 141 bits (341), Expect = 2e-32
Identities = 67/167 (40%), Positives = 106/167 (63%)
Frame = +1
Query: 199 KLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVER 378
KL L+G +DPVY EA ++V+Q+D+ +D LLVN T L N +EL +LG ++L ER
Sbjct: 747 KLEDTMPLSGFNDPVYCEASITVHQFDVSVDWLLVNCTSKQLTNLTIELVSLGGMKLCER 806
Query: 379 AAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQ 558
L P + ++R +KV++TE+GVI+G V+Y+ + +LNDIH+DI+++I
Sbjct: 807 PQTYTLDPHETIAVRTSLKVSATESGVIYGTVLYD--APNNQHCSFILNDIHVDIMNYIH 864
Query: 559 PAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
P C A+FR+ W F+WENK++V+T DL ++ ++ NM+ L
Sbjct: 865 PGPCFSAEFREKWGIFDWENKIAVSTTKRDLTSLVRFIVQELNMQLL 911
>UniRef50_Q1EQ38 Cluster: Beta2-COP; n=2; Entamoeba histolytica|Rep:
Beta2-COP - Entamoeba histolytica
Length = 910
Score = 130 bits (313), Expect = 4e-29
Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 4/171 (2%)
Frame = +1
Query: 199 KLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVER 378
+L + QLTG SDP Y EAIV+V +DI LD L++NQT TLQN +EL G + + +
Sbjct: 669 RLNNIVQLTGYSDPFYIEAIVTVTHFDITLDCLIMNQTPSTLQNITIELIPHGGMTVKTK 728
Query: 379 AAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGV----VVLNDIHIDIV 546
+ V L P DF + VKV +T GVI G V Y++ ++ ++LN++ I+ +
Sbjct: 729 PSPVTLGPGDFVRVSLGVKVDATTVGVISGYVNYDIADKNVTYNALDANLILNELRIEYL 788
Query: 547 DFIQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
D ++P +++ W E+EWENK+ V+T TDL EY L + ++C+
Sbjct: 789 DQMRPCDVDIEVYQKKWMEYEWENKIPVDTECTDLKEYADLLCSIAKLQCI 839
>UniRef50_Q23JD9 Cluster: Adaptin N terminal region family protein;
n=1; Tetrahymena thermophila SB210|Rep: Adaptin N
terminal region family protein - Tetrahymena thermophila
SB210
Length = 959
Score = 128 bits (308), Expect = 2e-28
Identities = 70/217 (32%), Positives = 124/217 (57%), Gaps = 4/217 (1%)
Frame = +1
Query: 22 DVDKEREPKRQEQKV-EIETGITFSQLAGAGASGSQHDMFELALNKALQGRSGGEAID-R 195
D++++RE K+ + + I L G A D+ + +N+ ++ + GE D
Sbjct: 664 DLEQQREEKKDSHIAKQPDDLIVIRALKGKQAEIGDLDLQDEEINQ-IEFKGVGEDNDFA 722
Query: 196 GKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATL--GELRL 369
KL ++ QLTG SDP+YAE+ V +++YDI + LL+N+T LQ +E T + R+
Sbjct: 723 SKLNKLVQLTGYSDPIYAESFVYIHKYDIQFETLLINRTTKPLQKVQIEFFTQENDQKRV 782
Query: 370 VERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVD 549
+E+A V L P A ++ +K S + GVIFG + YE A +++ ++ +I ID++D
Sbjct: 783 IEKAQAVTLQPNQSAYVKTSLKFTSIDIGVIFGAINYENI-AGIEQAYLITKEIDIDLID 841
Query: 550 FIQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEY 660
F+ PA +R+MWA++EWEN++ +N ++ ++
Sbjct: 842 FVYPAEIDFNSYREMWAKYEWENRIVINPQKIEMLQF 878
>UniRef50_Q8ILG6 Cluster: Coatamer protein, beta subunit, putative;
n=3; Plasmodium|Rep: Coatamer protein, beta subunit,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1394
Score = 125 bits (301), Expect = 1e-27
Identities = 59/164 (35%), Positives = 103/164 (62%)
Frame = +1
Query: 199 KLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVER 378
KL + LTG D ++ EA+ ++ ++++++ + NQ++ LQN + L+T G L+ +++
Sbjct: 1097 KLYNSQILTGTDDDIFIEALPIISNVNLIIEIYVYNQSNVYLQNIYINLSTHGNLKPIDK 1156
Query: 379 AAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQ 558
E LAP + + VKV +TE G+IFG V YE + + +VLN++HI++ D+I
Sbjct: 1157 IPEFNLAPNEKKKFKISVKVHTTEAGIIFGYVFYERKNDN-HKNYIVLNELHINMTDYIN 1215
Query: 559 PAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNM 690
+ S FR MW+EFEWENK++++T++ D E L+ ++ TNM
Sbjct: 1216 ASFISSHLFRIMWSEFEWENKINIHTSIRDAFELLKLIIKNTNM 1259
>UniRef50_Q1EQ39 Cluster: Beta1-COP; n=1; Entamoeba histolytica|Rep:
Beta1-COP - Entamoeba histolytica
Length = 843
Score = 122 bits (295), Expect = 6e-27
Identities = 60/166 (36%), Positives = 101/166 (60%), Gaps = 5/166 (3%)
Frame = +1
Query: 217 QLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGE-LRLVERAAEVV 393
QL+G SDP+Y EA + ++Q+DI +D L+VNQ+ TLQN ++L + L ++ + +
Sbjct: 609 QLSGYSDPLYVEASLELSQFDIAIDTLIVNQSQSTLQNIMIQLVPRSDGLEVIGQQQPLT 668
Query: 394 LAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGV----VVLNDIHIDIVDFIQP 561
L +F + V V T +G+I G + Y+ G + G +VLN+I ++ +D I+P
Sbjct: 669 LGAGEFTRVTIPVCVTGTSSGLIAGYINYDRVGREITTGSSDNHMVLNNISVEALDSIKP 728
Query: 562 AHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
A S F++ W +EWENK+ V T++TDL ++++HL T+M C+
Sbjct: 729 ADISQDVFQKKWMGYEWENKIIVETDITDLVQFIEHLCKETHMNCV 774
>UniRef50_A5K0V2 Cluster: Coatamer protein, beta subunit, putative;
n=1; Plasmodium vivax|Rep: Coatamer protein, beta
subunit, putative - Plasmodium vivax
Length = 1311
Score = 122 bits (293), Expect = 1e-26
Identities = 58/164 (35%), Positives = 102/164 (62%)
Frame = +1
Query: 199 KLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVER 378
KL ++LTG D ++ EA+ V+ +++++ + NQ+ LQ+ + L+T G L+ +++
Sbjct: 1037 KLYNSQRLTGTDDDLFIEAVPIVSNVNLIVEFYIYNQSGAYLQSIFISLSTHGNLKPIDK 1096
Query: 379 AAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQ 558
E LAP + + VKV +TE G+IFG V YE + + +VL+++HI++ D+I
Sbjct: 1097 IPEFNLAPNEKRKFKITVKVHTTEAGIIFGYVFYERKNENR-KNYIVLSELHINMTDYIS 1155
Query: 559 PAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNM 690
+ S FR MW+EFEWENK++++T++ D E L+ ++ TNM
Sbjct: 1156 ASFISSHLFRVMWSEFEWENKINISTSIRDAFELLKLIIKHTNM 1199
>UniRef50_Q7RQ31 Cluster: Coatomer beta subunit; n=4; Plasmodium
(Vinckeia)|Rep: Coatomer beta subunit - Plasmodium yoelii
yoelii
Length = 1286
Score = 114 bits (274), Expect = 2e-24
Identities = 56/164 (34%), Positives = 98/164 (59%)
Frame = +1
Query: 199 KLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVER 378
KL + + +T +D ++ E ++ +++L+ + NQ+ LQN + L+T L+ +++
Sbjct: 1012 KLHKSQPITSIADDIFIEIFPIISSINLILEFYIYNQSGIYLQNIFINLSTHNNLKPIDK 1071
Query: 379 AAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQ 558
+ LAP + R +KV +TE G IFG V +E + +VLN+I+I++ D+I
Sbjct: 1072 IPQFNLAPNEKKKFRTTIKVHTTETGTIFGYVFFEKKN-DPQKYYIVLNEININMNDYIT 1130
Query: 559 PAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNM 690
+ S FR MW+EFEWENK++VNT+++D E L+ ++ TNM
Sbjct: 1131 ASFVSSHLFRIMWSEFEWENKINVNTSISDAFELLKLIIKHTNM 1174
>UniRef50_A3FQR5 Cluster: Putative uncharacterized protein; n=3;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 1330
Score = 109 bits (262), Expect = 6e-23
Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 23/209 (11%)
Frame = +1
Query: 133 MFELALNKALQGRSGGEAIDRGKLC-RVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQ 309
M L + + G+ G +ID+ R+ +TG SDP+Y EAI+ V D++L++++ NQ
Sbjct: 931 MDPLNIKNSNNGKKG--SIDQSNTSKRIYSITGLSDPIYIEAILQVQHQDVLLELIVTNQ 988
Query: 310 TDDTLQNCCVELATLGELRLVERAAEV-VLAPRDFASLRAHVKVASTENGVIFGNVVYEV 486
+ +QN +EL G LR++E+ + L P + + + +V S E G++FG V ++
Sbjct: 989 SYKAVQNVQIELYPYGNLRVIEKPQNINHLDPGNTIHVYSVAQVKSIETGILFGFVTFQT 1048
Query: 487 TGASMD---------------------RGVVVLNDIHIDIVDFIQPAHCSDADFRQMWAE 603
+ D +VVLN+I ID++DFI ++ FRQ+W+E
Sbjct: 1049 KNSQNDGLGGGIGSGAVSSSSSQLLGLNDIVVLNEISIDLIDFITNSNIPCPLFRQLWSE 1108
Query: 604 FEWENKVSVNTNMTDLHEYLQHLLAFTNM 690
FEWENK+ ++T+ ++L++L+ T +
Sbjct: 1109 FEWENKIPIHTSCDSFIQFLKYLIKETKL 1137
>UniRef50_A2DHS1 Cluster: Adaptin N terminal region family protein;
n=1; Trichomonas vaginalis G3|Rep: Adaptin N terminal
region family protein - Trichomonas vaginalis G3
Length = 900
Score = 92.7 bits (220), Expect = 8e-18
Identities = 42/142 (29%), Positives = 82/142 (57%)
Frame = +1
Query: 220 LTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVERAAEVVLA 399
L+G DP+++E + ++DI+L++ L+NQT L N VEL G+L LV++ + + L
Sbjct: 677 LSGTCDPIFSECTMKPGKFDILLEINLLNQTLSNLLNVKVELYCSGKLELVDKPSTITLP 736
Query: 400 PRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQPAHCSDA 579
+ + +K S E G I+GN++Y++ +R ++ L+ I I +++ P
Sbjct: 737 AQQSDQIICSIKATSAEAGRIYGNILYDIENVE-ERQLIPLSPITITPDNYMIPLKVDSI 795
Query: 580 DFRQMWAEFEWENKVSVNTNMT 645
+R+ W FEWE K+++++ ++
Sbjct: 796 KYREKWEMFEWEKKITISSTLS 817
>UniRef50_Q7R211 Cluster: GLP_163_4671_7817; n=1; Giardia lamblia ATCC
50803|Rep: GLP_163_4671_7817 - Giardia lamblia ATCC 50803
Length = 1048
Score = 91.1 bits (216), Expect = 2e-17
Identities = 58/162 (35%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Frame = +1
Query: 172 SGGEAIDRGKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELAT 351
S G+ G L V QL+G S+ +YAEAI+ V+ I L+VL +N+T+++ Q+ +EL
Sbjct: 786 SAGKIYSSGSLGNVVQLSGDSERIYAEAIIQVSPSLIALEVLFINRTNESAQDVTLELFA 845
Query: 352 LGELRLVERAAEVV-LAPRDFASLRAHVKVASTENGVIFGNVVYEVT-----GASMDRGV 513
LR+ A +VV L P FA + + V + E GVI+GN+ + T S V
Sbjct: 846 SPSLRVPHTANKVVNLEPYGFARDKYILYVDNCEAGVIYGNITAKFTQEKQKNESRTHEV 905
Query: 514 V-VLNDIHIDIVDFIQPAHCSDADFRQMWAEFEWENKVSVNT 636
+ +I I+I F+ P D +F ++W+ F+WE KV+V+T
Sbjct: 906 IHRTKEIDINIRSFLTPYSLRDREFCRLWSIFDWEYKVAVST 947
>UniRef50_Q8SRB1 Cluster: COATOMER COMPLEX BETA SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: COATOMER COMPLEX BETA
SUBUNIT - Encephalitozoon cuniculi
Length = 818
Score = 88.6 bits (210), Expect = 1e-16
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Frame = +1
Query: 148 LNKALQGRSGGEAIDRGKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQ 327
LN+ L GG A ++ V QLTG SDP+Y EA S +Y+IV+D+L +NQT LQ
Sbjct: 568 LNEFLVDSEGGSA----EMRNVTQLTGLSDPIYVEATTSYTRYEIVVDMLFINQTPSYLQ 623
Query: 328 NCCVELATLGELRLVERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDR 507
N ++ T L + L+ R + R ++ NG I G++ + +
Sbjct: 624 NILLDFVTSQGLSATFISTPFSLSSRSVVTKRFTFRIIDASNGFISGSITFRYPDECGEY 683
Query: 508 GVVV----LNDIHIDIVDFIQPAHCSDADFRQMWAEFEWEN 618
V L+++ + +F++P FR+ W E EWEN
Sbjct: 684 ANTVYTINLSEVKTSVSEFLEPRKMDPDGFRETWKELEWEN 724
>UniRef50_Q4N7Y3 Cluster: Coatomer beta subunit, putative; n=1;
Theileria parva|Rep: Coatomer beta subunit, putative -
Theileria parva
Length = 923
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/164 (26%), Positives = 84/164 (51%)
Frame = +1
Query: 208 RVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVERAAE 387
++ Q T +DP+Y E + + + ++L+ N++ + LQN ++L+T ++L
Sbjct: 672 KIHQFTSLTDPLYVEGYIKLIGNKLYFNMLIENKSTEVLQNITLDLSTGTHMQLATSRKL 731
Query: 388 VVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQPAH 567
+ L+PR + ++ S+ + ++G V Y T +++ + N IHI + DFIQ
Sbjct: 732 ITLSPRQQVKTQVKFRIDSSTDETVYGYVYYS-TSSTILLQCLSFNPIHISLYDFIQRNK 790
Query: 568 CSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
S A FR W +F+WEN + + + L LL +T+M +
Sbjct: 791 ISGAQFRTFWNDFQWENVIKLCDVRVTPTQLLNSLLNYTHMSII 834
>UniRef50_Q5DAU2 Cluster: SJCHGC04770 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04770 protein - Schistosoma
japonicum (Blood fluke)
Length = 161
Score = 74.5 bits (175), Expect = 2e-12
Identities = 28/52 (53%), Positives = 41/52 (78%)
Frame = +1
Query: 544 VDFIQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
+++I PA C+ ++FRQMW+EFEWENKV+VNT + DL YL + + TN++CL
Sbjct: 1 MEYIMPATCTPSEFRQMWSEFEWENKVTVNTQIKDLFTYLSQITSHTNLRCL 52
>UniRef50_A7AS75 Cluster: Coatamer beta subunit, putative; n=1;
Babesia bovis|Rep: Coatamer beta subunit, putative -
Babesia bovis
Length = 993
Score = 72.9 bits (171), Expect = 7e-12
Identities = 45/163 (27%), Positives = 79/163 (48%)
Frame = +1
Query: 202 LCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVERA 381
L V Q T DP+Y EA V+V I L + L N TD LQN V L + +
Sbjct: 727 LSNVHQFTSLMDPLYIEASVAVIATRIYLTLYLRNTTDILLQNIRVMLFVVNNRDVATAQ 786
Query: 382 AEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQP 561
+ L + L+ ++K+ +EN I+G+V ++ + + + N + + + D++ P
Sbjct: 787 PIITLESGGSSVLQLNIKLKRSENDNIYGHVYFDKEKSGIQE-CLSFNPMDVWLYDYVTP 845
Query: 562 AHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNM 690
+ + FR W EWE ++ ++ + D E L+ +L T+M
Sbjct: 846 SFITLDSFRSSWDAAEWEERLDLHQSDMDPVELLRDILQVTHM 888
>UniRef50_Q6E6I0 Cluster: Coatomer complex beta subunit; n=1;
Antonospora locustae|Rep: Coatomer complex beta subunit -
Antonospora locustae (Nosema locustae)
Length = 807
Score = 70.5 bits (165), Expect = 4e-11
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Frame = +1
Query: 211 VRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVERAAEV 390
V QLT SDP+Y EA V + ++++DVL +NQT+ L N + L + +
Sbjct: 575 VVQLTSLSDPLYCEANVQIMNSEVLVDVLCINQTEFDLHNVLFDFTFSSNLAIKTLISPF 634
Query: 391 VLAPRDFASLRAHVKVASTENGVIFGNVVY----EVTGASMDRGVVVLNDIHIDIVDFIQ 558
++P + +++ N + G V + E + L +I + ++DF++
Sbjct: 635 QMSPHAAREQQFVFRISEAMNSFVLGRVTFSYPDERKRFNATEMHTNLGEIKLSVLDFLR 694
Query: 559 PAHCSDADFRQMWAEFEWENKVSVNTNMTD 648
P S FR+ W + EWEN S+ ++ +
Sbjct: 695 PQRMSAEHFRREWPKLEWENVYSLKFHVRE 724
>UniRef50_Q4UHM1 Cluster: Coatamer, beta subunit, putative; n=1;
Theileria annulata|Rep: Coatamer, beta subunit, putative
- Theileria annulata
Length = 992
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/158 (22%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Frame = +1
Query: 235 DPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVERAA-----EVVLA 399
DP+Y E + + I ++ + N++++ LQN ++L+T ++L+ + L
Sbjct: 700 DPIYVEGYIKLIGNKIYFNINIENRSNEILQNISLDLSTGTNMQLISNMLIMNRKMIKLL 759
Query: 400 PRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQPAHCSDA 579
P + + + ++ S+ N +++G V Y + + + N +HI + +FI + S
Sbjct: 760 PNEIITTQVKFRIDSSTNEIVYGYVYYSTCNTILLQ-CLSFNPLHISLYNFIHKNYISGQ 818
Query: 580 DFRQMWAEFEWENKVS-VNTNMTDLHEYLQHLLAFTNM 690
FR W +F+WEN + +N + ++ ++ ++ FT+M
Sbjct: 819 QFRHYWNDFQWENVIKLINIKLKPIN-LIKIIIKFTHM 855
>UniRef50_A0LBV0 Cluster: Methyl-accepting chemotaxis sensory
transducer; n=1; Magnetococcus sp. MC-1|Rep:
Methyl-accepting chemotaxis sensory transducer -
Magnetococcus sp. (strain MC-1)
Length = 775
Score = 39.1 bits (87), Expect = 0.10
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = -2
Query: 618 VLPFEFSPHLPEVGVAAVRRLDEVDNVNVDVIQHDHAAVHGRSSHFVYHVPEDDAVLRGG 439
VLPF+ + EV + +RRLD++ N+DV+ D + H + ++ E R G
Sbjct: 658 VLPFDIRT-VKEVHLRWLRRLDQMVGGNLDVMSMDQLSNHEKCDLGRWYYGEGSQ--RYG 714
Query: 438 DLDVRPQRGEVPRRQHHLGRALHQAQLAQRGQLHAAV--LQRVVGLVDE 298
+ + Q G V ++ H +GR LA+ G AA+ + R+ G+ DE
Sbjct: 715 NFALFQQLGGVHQKVHQVGR--ETWALAESGDKEAALRSMDRLRGIKDE 761
>UniRef50_Q3JRH4 Cluster: Putative uncharacterized protein; n=3;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 1205
Score = 35.5 bits (78), Expect = 1.3
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Frame = -2
Query: 588 PEVGVAAVRRLDEVDNVNVDVIQHDHAAVHGRSSHFV--YHVPEDDAVLRGGDLDVRPQR 415
PE G A RR E+D + + + HGR +H HVP + RPQR
Sbjct: 396 PERGCAVERRQPEIDRIAEILAREAELQAHGRVAHRARHRHVPREHPARE--PFGARPQR 453
Query: 414 GEVP-----RRQHHLGRAL-HQAQLAQRGQLHAAV 328
P RR H R + QAQ + +L AAV
Sbjct: 454 RRQPALARERRNHAALRGIREQAQRTIQARLAAAV 488
>UniRef50_A6RJY2 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 951
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +1
Query: 460 IFGNVVYEVTGASMDRGVVVLNDIHIDIVDFIQPAHCSDADFRQMWAEFEWENKVSVNTN 639
+FGN+ E+TG + V N H +++ ++ S+A R++W F E K S++
Sbjct: 354 VFGNIASEITG----KQVFNPNSAHSVVIEALEKTKSSEALARRLWMSFAVEGKDSLSAE 409
Query: 640 MTDLHEYL 663
DL E L
Sbjct: 410 --DLEEVL 415
>UniRef50_UPI0000566A7A Cluster: adaptor-related protein complex
AP-4, epsilon 1; n=1; Mus musculus|Rep: adaptor-related
protein complex AP-4, epsilon 1 - Mus musculus
Length = 582
Score = 35.1 bits (77), Expect = 1.7
Identities = 31/139 (22%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Frame = +1
Query: 229 CSDPVYAEAIVSVNQYDIVLDVLLV-NQTDDTLQNCCVELATLGELRLVER--AAEVVLA 399
CS+ + + V + D +L + V ++TD + +E+ + +++E+ + V+
Sbjct: 367 CSNEAVSVSSYKVWRDDCLLVIWAVTSKTDSEFTDAQLEIFPVENFKIIEQPECSSPVIE 426
Query: 400 PRDFASLRAHVKVAST-ENGVIFGNVVYEVTGASMDRGVVVLN-DIHIDIVDFIQPAHCS 573
S + V++ S G + G + Y++ MD V L +++ ++DFI+P S
Sbjct: 427 TERTKSFQYSVQMESPCIEGTLSGFIKYQM----MDTHSVQLEFSMNLPLLDFIRPLKIS 482
Query: 574 DADFRQMWAEFEWENKVSV 630
DF ++W F + K ++
Sbjct: 483 TEDFGKLWLSFANDVKQTI 501
>UniRef50_Q51763 Cluster: IS1162 DNA; n=4; Pseudomonas|Rep: IS1162
DNA - Pseudomonas fluorescens
Length = 571
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +3
Query: 540 HCRLHPAGALQRRRLQANVG*IRMGEQGLREHQHDGLA*VPAAPSCLHQHEVP 698
H R+ GALQR +QA + + MG+QG R +H LA CL Q P
Sbjct: 293 HHRVVMPGALQRGAVQARLVAVGMGDQGARVVRHHHLADPAKIAECLTQRGQP 345
>UniRef50_Q1D8M5 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 515
Score = 34.3 bits (75), Expect = 2.9
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = +2
Query: 338 WSWPRWAS---CAWWSARPRW 391
W W RWA+ C WW +R RW
Sbjct: 6 WRWMRWAASAGCRWWPSRTRW 26
>UniRef50_A0VIT9 Cluster: Major facilitator superfamily MFS_1; n=1;
Delftia acidovorans SPH-1|Rep: Major facilitator
superfamily MFS_1 - Delftia acidovorans SPH-1
Length = 680
Score = 33.9 bits (74), Expect = 3.9
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 97 LAGAGASGSQHDMFELALNKALQGRSGG 180
LAG+ A G+ HD+ +L L +ALQG GG
Sbjct: 263 LAGSLACGASHDLQQLVLARALQGAGGG 290
>UniRef50_UPI0000E2510B Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 439
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 103 GAGASGSQHDMFELALNKALQGRSGGEAIDRGKLCRVRQLTGCSDPVYAEAIVSVN 270
GAG GS+ L+L ++ GRSG A + CR R S P+ A + V+
Sbjct: 126 GAGVRGSERWPPALSLPRSRSGRSGSGAAPAPRSCRSRAPGAASPPMLAARVAPVS 181
>UniRef50_A3VVQ1 Cluster: Putative uncharacterized protein; n=1;
Parvularcula bermudensis HTCC2503|Rep: Putative
uncharacterized protein - Parvularcula bermudensis
HTCC2503
Length = 436
Score = 33.1 bits (72), Expect = 6.7
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = -2
Query: 633 VHGDLVLPFEFSPHLPEVGVAAVRRLDEVDNVNVDVIQHDHAAVHG-RSSHFVYHVPEDD 457
V G +V+PF+F P++ A R ++ +D + + R + V E
Sbjct: 104 VEGSIVVPFDFLTRGPKIAAARAR----LEAAELDTLHASITLIRDVRHAFTVAQAAERR 159
Query: 456 AVLRGGDLDVRPQRGEVPRRQHHLGRALHQAQLAQRGQLHAA 331
AVL D D Q + R +GR +A R AA
Sbjct: 160 AVLLAADADALGQLANIARNSADVGRGTGLNAVAARSTALAA 201
>UniRef50_Q8U256 Cluster: Type II secretion system protein; n=3;
Thermococcaceae|Rep: Type II secretion system protein -
Pyrococcus furiosus
Length = 1150
Score = 33.1 bits (72), Expect = 6.7
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 1 GEPHLLEDVDKEREPKRQEQKVEIETGITFSQLAGAGAS 117
G P LE++ K+ EPKR+E+K +IE G Q AG +
Sbjct: 82 GGPPKLEEILKKEEPKREEKKPKIERGALGLQEILAGTT 120
>UniRef50_Q9UPM8 Cluster: AP-4 complex subunit epsilon-1; n=29;
Euteleostomi|Rep: AP-4 complex subunit epsilon-1 - Homo
sapiens (Human)
Length = 1137
Score = 33.1 bits (72), Expect = 6.7
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 7/152 (4%)
Frame = +1
Query: 259 VSVNQYDIVLD--VLLV----NQTDDTLQNCCVELATLGELRLVERAAEVVLAPRDFASL 420
+SV+ Y I D +L+V N++ L++ +E+ ++ E+ L + S
Sbjct: 927 ISVSSYKIWKDDCLLMVWSVTNKSGLELKSADLEIFPAENFKVTEQPG-CCLPVMEAEST 985
Query: 421 RAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLN-DIHIDIVDFIQPAHCSDADFRQMW 597
++ E GN+ ++ MD L +++ ++DFI+P S DF ++W
Sbjct: 986 KSFQYSVQIEKPFTEGNLTGFISYHMMDTHSAQLEFSVNLSLLDFIRPLKISSDDFGKLW 1045
Query: 598 AEFEWENKVSVNTNMTDLHEYLQHLLAFTNMK 693
F N V N M++ L L K
Sbjct: 1046 LSF--ANDVKQNVKMSESQAALPSALKTLQQK 1075
>UniRef50_UPI0000DB7FFD Cluster: PREDICTED: similar to CG18497-PA,
isoform A, partial; n=1; Apis mellifera|Rep: PREDICTED:
similar to CG18497-PA, isoform A, partial - Apis
mellifera
Length = 4346
Score = 32.7 bits (71), Expect = 8.9
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Frame = -3
Query: 260 TMASAYTGSEHPVN*RTR-------HNLPRSIASPPLRPCSALLSASSNMSCCEPEAPAP 102
T A G HP+N +T + ++ASPP +P L +N+SC P AP P
Sbjct: 3862 TALKAINGQPHPLNPKTHLLQAVVPPMVTGAVASPPTQP-HMLNPQPANVSCSRPPAPKP 3920
Query: 101 ASCENVMPVSI 69
+ + P +
Sbjct: 3921 SVTGTMEPPKV 3931
>UniRef50_Q21DY5 Cluster: Sensor protein; n=1; Saccharophagus
degradans 2-40|Rep: Sensor protein - Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024)
Length = 434
Score = 32.7 bits (71), Expect = 8.9
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2
Query: 534 VDVIQHDHAAVHGRSSHFVYHVPEDDAVLRGGDLDVR 424
+ I D A++G S+H + H +D+ VLRG + ++R
Sbjct: 286 IQTIMSDAQALNGESTHTLIHKGDDNLVLRGNEKELR 322
>UniRef50_A4NVU6 Cluster: Hypothetical tRNA/rRNA methyltransferase;
n=1; Haemophilus influenzae 22.4-21|Rep: Hypothetical
tRNA/rRNA methyltransferase - Haemophilus influenzae
22.4-21
Length = 205
Score = 32.7 bits (71), Expect = 8.9
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 259 VSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELRLVERAAEVVLAPRDFA 414
+S DIV + ++VN DD ++NC + + T LR ++ ++ PR+ A
Sbjct: 48 LSAGAEDIVKNAMIVNSFDDAVKNCSLVIGTSARLRHLQ---NTLIEPRECA 96
>UniRef50_A3PUX6 Cluster: Acyl-CoA dehydrogenase, type 2, C-terminal
domain; n=3; Mycobacterium|Rep: Acyl-CoA dehydrogenase,
type 2, C-terminal domain - Mycobacterium sp. (strain
JLS)
Length = 396
Score = 32.7 bits (71), Expect = 8.9
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 370 VERAAEVVLAPRDFASLR-AHVKVASTENGVIFGNVVYEVTGASMDRGVVVLN 525
+ R A+V A R + A +KV +TE + + VYEVTG+S R V L+
Sbjct: 306 IARGADVTAADRTEVEIGIAQLKVVATETALEVAHRVYEVTGSSSARSEVGLD 358
>UniRef50_A4ICM4 Cluster: Ribosomal protein L24, putative; n=1;
Leishmania infantum|Rep: Ribosomal protein L24, putative
- Leishmania infantum
Length = 150
Score = 32.7 bits (71), Expect = 8.9
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Frame = -2
Query: 618 VLPFEFSPHLPEVGVAAVR-RLDEV--DNVNVDVIQHDHA----AVHGRSSHFVYHVPED 460
VLP +P P V AVR +DE D + +V++ HA A+H +H H P+D
Sbjct: 7 VLPLRGAPR-PRPPVRAVRVPVDEAGADLLAAEVLRTVHAQEEPALHSVDAHVPPHPPQD 65
Query: 459 DAVLRGGDLDVRPQRGEVPRRQHHLGRALHQ--AQLAQRGQL 340
D R + R RGE R G LH A+ AQ G L
Sbjct: 66 DDGPR--EPPPRRARGEGAARDRRCGPVLHPGGARGAQGGPL 105
>UniRef50_O13921 Cluster: MutS protein homolog 1; n=3;
Schizosaccharomyces pombe|Rep: MutS protein homolog 1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 941
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 544 VDFIQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLA 678
V+ ++ + S+ D RQ + E W K + N N+ LHE LQ L A
Sbjct: 526 VEIVKKSLSSEFDIRQSFKE-NWVVKSNFNNNLRKLHEKLQSLFA 569
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,758,409
Number of Sequences: 1657284
Number of extensions: 9077464
Number of successful extensions: 39115
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 37127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39057
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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