Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1289
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L31852-1|AAA21090.1| 962|Drosophila melanogaster bcop protein. 272 3e-73
AF145656-1|AAD38631.1| 964|Drosophila melanogaster BcDNA.GH0931... 272 3e-73
AE014298-2708|AAF48830.2| 964|Drosophila melanogaster CG6223-PA... 272 3e-73
BT023904-1|ABA81838.1| 563|Drosophila melanogaster IP14421p pro... 29 8.0
AY113532-1|AAM29537.1| 518|Drosophila melanogaster RE60854p pro... 29 8.0
AY094873-1|AAM11226.1| 994|Drosophila melanogaster RE41093p pro... 29 8.0
AE014296-1548|AAF50346.1| 994|Drosophila melanogaster CG5660-PA... 29 8.0
AE014296-574|AAN11534.1| 512|Drosophila melanogaster CG15812-PB... 29 8.0
AE014296-573|AAF47724.2| 518|Drosophila melanogaster CG15812-PA... 29 8.0
>L31852-1|AAA21090.1| 962|Drosophila melanogaster bcop protein.
Length = 962
Score = 272 bits (667), Expect = 3e-73
Identities = 134/231 (58%), Positives = 173/231 (74%), Gaps = 4/231 (1%)
Frame = +1
Query: 19 EDVDKEREPKRQEQKVEIETGITFSQLAGAGASGSQHDMFELALNKALQGRSGGEAID-- 192
ED +E ++ KV+ + + F+QL+ + ++FE +LN+AL G + D
Sbjct: 660 EDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLGENVFESSLNQALAGSKNAQLSDVA 719
Query: 193 --RGKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELR 366
KL +V QLTG SDPVYAEA V+VNQYDIVLDVL+VNQT+DTLQNC +ELATLG+L+
Sbjct: 720 SPNSKLNKVTQLTGFSDPVYAEAYVNVNQYDIVLDVLIVNQTNDTLQNCTLELATLGDLK 779
Query: 367 LVERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIV 546
LVER VVLAP DF +++A+VKV+STENG+IFGN+VYE +++ VVVLN IHIDI+
Sbjct: 780 LVERPHPVVLAPHDFCNIKANVKVSSTENGIIFGNIVYE---TALNTNVVVLNTIHIDIM 836
Query: 547 DFIQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
D+I PA C+D +FRQMW +FEWENKV+VNT+ TDLHEYL+HLL TNMKCL
Sbjct: 837 DYIIPASCTDTEFRQMWQDFEWENKVTVNTSFTDLHEYLKHLLKSTNMKCL 887
>AF145656-1|AAD38631.1| 964|Drosophila melanogaster BcDNA.GH09317
protein.
Length = 964
Score = 272 bits (667), Expect = 3e-73
Identities = 134/231 (58%), Positives = 173/231 (74%), Gaps = 4/231 (1%)
Frame = +1
Query: 19 EDVDKEREPKRQEQKVEIETGITFSQLAGAGASGSQHDMFELALNKALQGRSGGEAID-- 192
ED +E ++ KV+ + + F+QL+ + ++FE +LN+AL G + D
Sbjct: 661 EDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLGENVFESSLNQALAGSKNAQLSDVA 720
Query: 193 --RGKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELR 366
KL +V QLTG SDPVYAEA V+VNQYDIVLDVL+VNQT+DTLQNC +ELATLG+L+
Sbjct: 721 SPNSKLNKVTQLTGFSDPVYAEAYVNVNQYDIVLDVLIVNQTNDTLQNCTLELATLGDLK 780
Query: 367 LVERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIV 546
LVER VVLAP DF +++A+VKV+STENG+IFGN+VYE +++ VVVLN IHIDI+
Sbjct: 781 LVERPHPVVLAPHDFCNIKANVKVSSTENGIIFGNIVYE---TALNTNVVVLNTIHIDIM 837
Query: 547 DFIQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
D+I PA C+D +FRQMW +FEWENKV+VNT+ TDLHEYL+HLL TNMKCL
Sbjct: 838 DYIIPASCTDTEFRQMWQDFEWENKVTVNTSFTDLHEYLKHLLKSTNMKCL 888
>AE014298-2708|AAF48830.2| 964|Drosophila melanogaster CG6223-PA
protein.
Length = 964
Score = 272 bits (667), Expect = 3e-73
Identities = 134/231 (58%), Positives = 173/231 (74%), Gaps = 4/231 (1%)
Frame = +1
Query: 19 EDVDKEREPKRQEQKVEIETGITFSQLAGAGASGSQHDMFELALNKALQGRSGGEAID-- 192
ED +E ++ KV+ + + F+QL+ + ++FE +LN+AL G + D
Sbjct: 661 EDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLGENVFESSLNQALAGSKNAQLSDVA 720
Query: 193 --RGKLCRVRQLTGCSDPVYAEAIVSVNQYDIVLDVLLVNQTDDTLQNCCVELATLGELR 366
KL +V QLTG SDPVYAEA V+VNQYDIVLDVL+VNQT+DTLQNC +ELATLG+L+
Sbjct: 721 SPNSKLNKVTQLTGFSDPVYAEAYVNVNQYDIVLDVLIVNQTNDTLQNCTLELATLGDLK 780
Query: 367 LVERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHIDIV 546
LVER VVLAP DF +++A+VKV+STENG+IFGN+VYE +++ VVVLN IHIDI+
Sbjct: 781 LVERPHPVVLAPHDFCNIKANVKVSSTENGIIFGNIVYE---TALNTNVVVLNTIHIDIM 837
Query: 547 DFIQPAHCSDADFRQMWAEFEWENKVSVNTNMTDLHEYLQHLLAFTNMKCL 699
D+I PA C+D +FRQMW +FEWENKV+VNT+ TDLHEYL+HLL TNMKCL
Sbjct: 838 DYIIPASCTDTEFRQMWQDFEWENKVTVNTSFTDLHEYLKHLLKSTNMKCL 888
>BT023904-1|ABA81838.1| 563|Drosophila melanogaster IP14421p
protein.
Length = 563
Score = 28.7 bits (61), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 361 LRLVERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHID 540
LR + EVVLA RD +RAH+ V ST + N++ +V ++L DI D
Sbjct: 65 LRNDNQHCEVVLASRDGVRVRAHLFVLST-CSELMRNLLVDVPRG--QEATIMLPDIRGD 121
Query: 541 IVD 549
+++
Sbjct: 122 LLE 124
>AY113532-1|AAM29537.1| 518|Drosophila melanogaster RE60854p
protein.
Length = 518
Score = 28.7 bits (61), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 361 LRLVERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHID 540
LR + EVVLA RD +RAH+ V ST + N++ +V ++L DI D
Sbjct: 20 LRNDNQHCEVVLASRDGVRVRAHLFVLST-CSELMRNLLVDVPRG--QEATIMLPDIRGD 76
Query: 541 IVD 549
+++
Sbjct: 77 LLE 79
>AY094873-1|AAM11226.1| 994|Drosophila melanogaster RE41093p
protein.
Length = 994
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 567 VRRLDEVDNVNVDVIQHDHAAVHGRSSHFVYHVPEDDAVLRG 442
V ++ + V + V +DH + GR F YHV + +A+ G
Sbjct: 228 VDSVEITEPVEISVPGYDHKVLFGRMYDFAYHVVDGEALPDG 269
>AE014296-1548|AAF50346.1| 994|Drosophila melanogaster CG5660-PA
protein.
Length = 994
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 567 VRRLDEVDNVNVDVIQHDHAAVHGRSSHFVYHVPEDDAVLRG 442
V ++ + V + V +DH + GR F YHV + +A+ G
Sbjct: 228 VDSVEITEPVEISVPGYDHKVLFGRMYDFAYHVVDGEALPDG 269
>AE014296-574|AAN11534.1| 512|Drosophila melanogaster CG15812-PB,
isoform B protein.
Length = 512
Score = 28.7 bits (61), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 361 LRLVERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHID 540
LR + EVVLA RD +RAH+ V ST + N++ +V ++L DI D
Sbjct: 14 LRNDNQHCEVVLASRDGVRVRAHLFVLST-CSELMRNLLVDVPRG--QEATIMLPDIRGD 70
Query: 541 IVD 549
+++
Sbjct: 71 LLE 73
>AE014296-573|AAF47724.2| 518|Drosophila melanogaster CG15812-PA,
isoform A protein.
Length = 518
Score = 28.7 bits (61), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 361 LRLVERAAEVVLAPRDFASLRAHVKVASTENGVIFGNVVYEVTGASMDRGVVVLNDIHID 540
LR + EVVLA RD +RAH+ V ST + N++ +V ++L DI D
Sbjct: 20 LRNDNQHCEVVLASRDGVRVRAHLFVLST-CSELMRNLLVDVPRG--QEATIMLPDIRGD 76
Query: 541 IVD 549
+++
Sbjct: 77 LLE 79
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,608,433
Number of Sequences: 53049
Number of extensions: 447464
Number of successful extensions: 1835
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1827
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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