Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1288
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.63 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   5.9  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   7.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   7.8  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 507 FQDFIKDIEEMYWAAKEQ 560
           ++DF +D    YW+AK Q
Sbjct: 206 YEDFRRDFLRTYWSAKRQ 223


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 488 SVRNSRLPRFYQGHRGNVLGCKGAIL 565
           S RN    RF++ +R  +LG   A++
Sbjct: 302 SCRNFTAARFFELNRRTILGVSNAVI 327


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 102 IENSDKWRNSAPNFYSIQSV 161
           I N DKWR    NF  I  +
Sbjct: 98  ILNQDKWRLLNNNFQQIDKI 117


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 417 KLDRKTFKEVIA 452
           KL +KTF+E++A
Sbjct: 379 KLSKKTFRELVA 390


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 417 KLDRKTFKEVIA 452
           KL +KTF+E++A
Sbjct: 379 KLSKKTFRELVA 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,757
Number of Sequences: 336
Number of extensions: 3089
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)