Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1288
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    24   4.2  
AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione S-tran...    23   5.6  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    23   9.8  

>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
          protein.
          Length = 700

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 25 DSPHRFLSPRYAPV 66
          D P RFL+ RY+P+
Sbjct: 31 DLPERFLTSRYSPI 44


>AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione
           S-transferase D3 protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 498 IPDFQDFIKDIEE 536
           IPD+ +F KD+EE
Sbjct: 188 IPDYAEFRKDVEE 200


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 183 RTNTALYRRIESNRSWVLSCAIYQSFQLY 97
           RT   L RR+ +  S    C  Y++FQ Y
Sbjct: 106 RTKECLERRVGAIDSPNSCCQAYETFQCY 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,592
Number of Sequences: 2352
Number of extensions: 12780
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)