Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1288
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81073-9|CAB03030.2| 583|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z79752-7|CAC70084.1| 583|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z82068-4|CAE17983.1| 185|Caenorhabditis elegans Hypothetical pr... 31 0.81
U58761-1|AAB00712.1| 333|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z81056-5|CAB02905.2| 307|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z83107-3|CAB05500.1| 529|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL110484-18|CAB54409.1| 357|Caenorhabditis elegans Hypothetical... 29 3.3
Z77667-3|CAB01237.1| 527|Caenorhabditis elegans Hypothetical pr... 27 7.5
U55854-10|AAN60533.1| 426|Caenorhabditis elegans Map kinase pro... 27 10.0
U55854-9|AAA98016.3| 605|Caenorhabditis elegans Map kinase prot... 27 10.0
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 27 10.0
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 27 10.0
AF285179-1|AAG15377.1| 706|Caenorhabditis elegans zygote defect... 27 10.0
AF003386-12|AAB54253.2| 706|Caenorhabditis elegans Zygote defec... 27 10.0
>Z81073-9|CAB03030.2| 583|Caenorhabditis elegans Hypothetical
protein F30F8.2 protein.
Length = 583
Score = 74.5 bits (175), Expect = 5e-14
Identities = 33/102 (32%), Positives = 67/102 (65%)
Frame = +3
Query: 237 DVLFDMFKNEETGLLPVGKFLAALRTTGIRKNDARVKEVMHSLYKVHKESNFEGGSPETL 416
++LFD++K+E TG + + +F AL +GIRK+D R+ +++ ++ +F G+ + +
Sbjct: 65 ELLFDLYKDETTGKVYLPRFFKALLESGIRKDDPRIDKMIQNIKDADLLDDFVWGT-QHI 123
Query: 417 KLDRKTFKEVIAPNIVLITRAFRSQFVIPDFQDFIKDIEEMY 542
L++ TFK I +I ++T+A + Q +IPD++ F+ D+ E++
Sbjct: 124 YLEKDTFKRYIGSSIGVVTKALKKQMIIPDWERFVSDMGEIF 165
>Z79752-7|CAC70084.1| 583|Caenorhabditis elegans Hypothetical
protein F30F8.2 protein.
Length = 583
Score = 74.5 bits (175), Expect = 5e-14
Identities = 33/102 (32%), Positives = 67/102 (65%)
Frame = +3
Query: 237 DVLFDMFKNEETGLLPVGKFLAALRTTGIRKNDARVKEVMHSLYKVHKESNFEGGSPETL 416
++LFD++K+E TG + + +F AL +GIRK+D R+ +++ ++ +F G+ + +
Sbjct: 65 ELLFDLYKDETTGKVYLPRFFKALLESGIRKDDPRIDKMIQNIKDADLLDDFVWGT-QHI 123
Query: 417 KLDRKTFKEVIAPNIVLITRAFRSQFVIPDFQDFIKDIEEMY 542
L++ TFK I +I ++T+A + Q +IPD++ F+ D+ E++
Sbjct: 124 YLEKDTFKRYIGSSIGVVTKALKKQMIIPDWERFVSDMGEIF 165
>Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical
protein DH11.1 protein.
Length = 605
Score = 69.3 bits (162), Expect = 2e-12
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +3
Query: 222 HKNADDVLFDMFKNEETGLLPVGKFLAALRTTGIRKNDARVKEVMHSLY---KVHKESNF 392
++ ++D++F++FK +GK L LR G+R +D R+ +M + K+ +E
Sbjct: 53 NEGSEDMIFELFKIPNKNEASIGKLLTVLRQLGLRDDDPRLVPMMEKIKDFEKIAEEKCS 112
Query: 393 EGGSPETLKLDRKTFKEVIAPNIVLITRAFRSQFVIPDFQDFIKDIEEMYWAAKE 557
E + KL ++ FKE IAP+I +++RA ++ VIP++ F+ I ++ KE
Sbjct: 113 EATEQKHWKLTKEQFKECIAPSIDIVSRALQTDMVIPNWVTFVDQIRTLFNECKE 167
>Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical
protein C09F9.3 protein.
Length = 800
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/89 (31%), Positives = 51/89 (57%)
Frame = +3
Query: 291 KFLAALRTTGIRKNDARVKEVMHSLYKVHKESNFEGGSPETLKLDRKTFKEVIAPNIVLI 470
+ + LR+ GI +ND R+K++ + K H E N + + ++ FKE+I P +LI
Sbjct: 97 RLIKVLRSFGIWENDPRLKQMFDRMKK-HDEENEDS---RQWAMSQEKFKEIIFPCTILI 152
Query: 471 TRAFRSQFVIPDFQDFIKDIEEMYWAAKE 557
+R R+Q +IP + +F + IE ++ +E
Sbjct: 153 SRTLRNQLIIPSWLEFTQLIETIFETCRE 181
>Z82068-4|CAE17983.1| 185|Caenorhabditis elegans Hypothetical
protein W04A4.6 protein.
Length = 185
Score = 30.7 bits (66), Expect = 0.81
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +3
Query: 222 HKNADDVLFDMFKNEETGLLPVGKFLAALRTTGIRKNDARVKEVMHSLYKVHKESNFEGG 401
H+N +V K+E TG + A T G K+ +R KE + K HK E
Sbjct: 100 HQNKGNVAIVFNKDESTGKSATSRMNA---TFG--KSSSR-KEAVKQFMKSHKSPKVEFA 153
Query: 402 SPETLK------LDRKTFKEVIAPNIVLIT 473
PE LK L RK EV+ ++ ++T
Sbjct: 154 IPENLKKYGIGNLPRKEKPEVVVKSVEVVT 183
>U58761-1|AAB00712.1| 333|Caenorhabditis elegans Hypothetical
protein C01F1.4 protein.
Length = 333
Score = 30.7 bits (66), Expect = 0.81
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -2
Query: 575 FLPSVLLLCSPVHFLYVLDKILEVWNYELTSESSSYQHYIWCNDFFEGLSIKFQCFWRS 399
F+PS+++LC FL + I ++ ++ S S + + +D + + I F FW S
Sbjct: 13 FIPSIIILCCVAAFLNFMVVISRLY-CKMRSASLELTYSLALSDTWTSIVIGFSLFWNS 70
>Z81056-5|CAB02905.2| 307|Caenorhabditis elegans Hypothetical
protein F09F3.7 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 30 ASPILKPSICACFRHYSQVRPVYIIENSDKWRNSAPNFYSIQSVDIRQYSFVHNIV 197
+SP+ P I +C+ Y ++ EN D+ + F+ I V + S + N+V
Sbjct: 134 SSPVFVPKIFSCYIIYDPETTIFSSENYDRCGEAMNQFFVISIVTLALISNLINLV 189
>Z83107-3|CAB05500.1| 529|Caenorhabditis elegans Hypothetical
protein F32A7.4 protein.
Length = 529
Score = 29.9 bits (64), Expect = 1.4
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = +3
Query: 318 GIRKNDARVKEVMHSLYKVHKESNFEGGSPE-TLKLDRKTFKEV-IAPNIVLITRAFRSQ 491
G + +A+ E+ + + ++ K+ NF E T K + +APN ITR
Sbjct: 138 GGKVQEAQQYEIRNEVDRIMKKENFNWKPLEITTKESAAAYSLARLAPNYAEITRTLEEF 197
Query: 492 FVIPDFQ-----DFIKDIEEMYWAAKEQY 563
IPDFQ DF +WA + ++
Sbjct: 198 NTIPDFQPETVLDFGSGAGAGFWAIQNKW 226
>AL110484-18|CAB54409.1| 357|Caenorhabditis elegans Hypothetical
protein Y38E10A.18 protein.
Length = 357
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -2
Query: 446 DFFEGLSIKFQCFWR-SSFEIRFLVNFVQAMHYLFNTCVVFSY 321
D FE ++K C W+ + + V A HY TC + Y
Sbjct: 266 DIFEYAALKSMCIWKLGLLDSTLTLKIVSAEHYYGITCALSKY 308
>Z77667-3|CAB01237.1| 527|Caenorhabditis elegans Hypothetical
protein M04B2.4 protein.
Length = 527
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 219 PHKNADDVLFDMFKNEETGLLPVGKFLAALRTTGIRKNDARVK-EVMHSLYKVHKESN 389
P+ N DDVL E G + + L+A+R I VK EV ++ H+ S+
Sbjct: 228 PYMNVDDVLLASLGVENEGTIDTWQLLSAIREKNITLGVQYVKGEVEGFQFERHRASS 285
>U55854-10|AAN60533.1| 426|Caenorhabditis elegans Map kinase
protein 2, isoform b protein.
Length = 426
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 132 APNFYSIQSVDIRQYSFVHNIVPKSVRDGP 221
APN+YS ++ + YS N V KS P
Sbjct: 10 APNYYSTNIIEHKTYSISKNTVNKSKMAAP 39
>U55854-9|AAA98016.3| 605|Caenorhabditis elegans Map kinase protein
2, isoform a protein.
Length = 605
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 132 APNFYSIQSVDIRQYSFVHNIVPKSVRDGP 221
APN+YS ++ + YS N V KS P
Sbjct: 10 APNYYSTNIIEHKTYSISKNTVNKSKMAAP 39
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 284 SWKIFGRPKNHRDKKKRRTC 343
SWKI PK H +KK++ C
Sbjct: 203 SWKIMVMPKQHMVQKKQQKC 222
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 284 SWKIFGRPKNHRDKKKRRTC 343
SWKI PK H +KK++ C
Sbjct: 203 SWKIMVMPKQHMVQKKQQKC 222
>AF285179-1|AAG15377.1| 706|Caenorhabditis elegans zygote
defective-1 protein.
Length = 706
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 336 ARVKEVMHSLYKVHKESNFEGGSPETLK-LDRKTFKEVIAPNIVLITRAFRSQFVIPDFQ 512
+ +KE+ + V + E G +K +D+K K + I + +S++V+ ++
Sbjct: 14 SHLKEIGKGGFGVVYAAQRENGEKVAIKRIDKKVPKNRVWTEIQTMKELKKSKYVVEFYE 73
Query: 513 DFIKD 527
DF++D
Sbjct: 74 DFVED 78
>AF003386-12|AAB54253.2| 706|Caenorhabditis elegans Zygote
defective: embryonic lethalprotein 1 protein.
Length = 706
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 336 ARVKEVMHSLYKVHKESNFEGGSPETLK-LDRKTFKEVIAPNIVLITRAFRSQFVIPDFQ 512
+ +KE+ + V + E G +K +D+K K + I + +S++V+ ++
Sbjct: 14 SHLKEIGKGGFGVVYAAQRENGEKVAIKRIDKKVPKNRVWTEIQTMKELKKSKYVVEFYE 73
Query: 513 DFIKD 527
DF++D
Sbjct: 74 DFVED 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,819,239
Number of Sequences: 27780
Number of extensions: 297989
Number of successful extensions: 927
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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