Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1287
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.1  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 419 SHLKSSRFIIARSVPT*DSMLI*IPVTDISAFYFISRRAFGLL 291
           S LKS+  +    V + + +    P TDI++FYF     F +L
Sbjct: 12  SWLKSNSSLAGFEVNSSEQLTTPTP-TDINSFYFYKTEQFTVL 53


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 270 LRSPVYLQKAESSSADKIKSRNI 338
           +RSP  L+K      DK  +RNI
Sbjct: 79  IRSPEILRKVLVKDFDKFTNRNI 101


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 502 TKFKNSKTFPFIVS*TSKYFCTIALRFLNE 591
           T F+ SKT  F    T+  +C++A+  L E
Sbjct: 396 TYFRLSKTKTFCTLVTALVYCSLAIFVLCE 425


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 247 TRSKYLFELIALKYDERRLPTYHGACNNKK 158
           TR+KYL       Y++  +  Y   C N+K
Sbjct: 23  TRTKYLRTNFPNFYNDFEVQRYTWKCENQK 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,676
Number of Sequences: 336
Number of extensions: 2639
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)