Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1286
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   6.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   6.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 358 PTRAGDAK*SFPLCACLWP 302
           PT  GDA   F  C C WP
Sbjct: 565 PT-GGDALSEFNFCGCGWP 582


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -3

Query: 393 SVHLFYRFINSSQLVQETPNKAFLY--VLVCGLAFLDQFLNITPRIIFKDKVQRLGWRMQ 220
           SV+L  +  N  + +        LY  + +  L  +   +N     IF DK+QR+    Q
Sbjct: 52  SVYLTTKIDNDGESISLASGWLDLYLGITIQTLGIISNCINAKQITIFFDKIQRID--KQ 109

Query: 219 YGIVISYEVS 190
           +G+ + Y ++
Sbjct: 110 FGL-LGYSIN 118


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 16/69 (23%), Positives = 33/69 (47%)
 Frame = +1

Query: 214 TILHSPSKTLYFVLEYNSWRNVQELIEECKATDKHIEESFIWRLLHELARVYKSVEEVNT 393
           +I  S S ++Y  + +N     +++ +        ++E     +L E+ RV K   E+N 
Sbjct: 300 SISTSVSTSVYLAIVFNGLFTEEDVADVPINVTLSLDEKKY--ILQEVVRVKKPHYELNM 357

Query: 394 VVLQKCLTP 420
           V ++  +TP
Sbjct: 358 VEVRSPVTP 366


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 40  DVFCGGTFYKVRHKVT 87
           DVF GGT  K+R + T
Sbjct: 165 DVFIGGTTGKLRRRST 180


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 168 FNFVYYVLYLFITERGTVVRL 106
           FN V+Y+  L + ER  ++ L
Sbjct: 46  FNIVFYMYTLILEERFKLINL 66


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = +1

Query: 292 EECK---ATDKHIEESFIWRLLHE 354
           E+C+   +   H+E+S I+ LLH+
Sbjct: 93  EDCELVLSNPTHMEKSAIYNLLHD 116


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = +1

Query: 292 EECK---ATDKHIEESFIWRLLHE 354
           E+C+   +   H+E+S I+ LLH+
Sbjct: 93  EDCELVLSNPTHMEKSAIYNLLHD 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,847
Number of Sequences: 336
Number of extensions: 3329
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)