Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1286
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    27   0.51 
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            27   0.68 
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       25   2.1  
AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione S-tran...    25   2.7  
Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein prot...    23   6.3  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 217 ILHSPSKTLYF--VLEYNSWRNVQELIEECKATDKHIEESFIWRLLHELARVYKSVEEVN 390
           +L+ PS+ ++   ++ YN+W    E+    KAT K+  E F W    E   +YKS  E+N
Sbjct: 103 MLYVPSEQIWLPDIVLYNNWDGNYEVTLMTKATLKYTGEVF-W----EPPAIYKSSCEMN 157


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 250 VLEYNSWRNVQELIEECK 303
           V+E N+W+   +LI+EC+
Sbjct: 145 VMERNNWKETHQLIQECE 162


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 419 QNQSLCSENGELRINCFNLTATGSTSDVMRQVGDLIH 529
           +NQS+   + E++   F L  +GST  + R V D  H
Sbjct: 177 RNQSMTYYSSEVQSLDFELDTSGSTRLINRWVSDKTH 213


>AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 229

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 184 LSANLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECKATDKHIEESF 333
           +S NL  YYD ++  PS+ L+  LE       + LI   K   +H+ E F
Sbjct: 1   MSKNLKYYYD-LMSQPSRALWIFLEKTKLPYEKCLINLGKG--EHLTEEF 47


>Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein
           protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 289 SILEHYATNYIQGQSTTSWMENAVWYRNI 203
           SIL   +T  + G     +   AVWY NI
Sbjct: 158 SILATISTYDVAGFDLAKYQHVAVWYENI 186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,338
Number of Sequences: 2352
Number of extensions: 13720
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)