Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1286
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68115-7|CAA92169.2| 302|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z50873-4|CAA90762.2| 302|Caenorhabditis elegans Hypothetical pr... 41 7e-04
DQ645955-1|ABG36763.1| 302|Caenorhabditis elegans molting prote... 41 7e-04
Z81140-4|CAJ55247.1| 463|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z81140-3|CAJ55246.1| 453|Caenorhabditis elegans Hypothetical pr... 37 0.011
U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase ... 37 0.014
AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threon... 37 0.014
Z95122-2|CAB08355.1| 363|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z48230-2|CAA88264.1| 363|Caenorhabditis elegans Hypothetical pr... 36 0.025
U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated k... 33 0.18
U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated ... 33 0.18
U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated ... 33 0.18
U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated k... 33 0.18
D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase ... 33 0.18
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 32 0.31
AL132949-1|CAB61068.2| 463|Caenorhabditis elegans Hypothetical ... 31 0.71
AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical... 30 1.2
AF099924-1|AAF23187.1| 348|Caenorhabditis elegans Cam kinase pr... 29 2.2
AB021864-1|BAA82674.1| 348|Caenorhabditis elegans Ca2+/calmodul... 29 2.2
AY350451-1|AAQ54691.1| 332|Caenorhabditis elegans calcium/calmo... 29 2.9
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 28 6.6
AC199170-8|ABO33266.1| 469|Caenorhabditis elegans Hypothetical ... 28 6.6
Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 27 8.7
U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical pr... 27 8.7
D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein. 27 8.7
AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride ... 27 8.7
>Z68115-7|CAA92169.2| 302|Caenorhabditis elegans Hypothetical
protein F19H6.1 protein.
Length = 302
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/97 (24%), Positives = 48/97 (49%)
Frame = +1
Query: 145 QNVVNEVKIISQVLSANLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECKATDKHIE 324
Q+ + E+ ++ Q+ N+IRYY + + + L VLE ++ +I+ K + I
Sbjct: 66 QDCLKEIDLLKQLNHVNVIRYYASFIDN--NQLNIVLELAEAGDMSRMIKHFKKGGRLIP 123
Query: 325 ESFIWRLLHELARVYKSVEEVNTVVLQKCLTPESVFV 435
E IW+ +LAR + ++ + + P +VF+
Sbjct: 124 EKTIWKYFVQLARALAHMHSKR--IMHRDIKPANVFI 158
>Z50873-4|CAA90762.2| 302|Caenorhabditis elegans Hypothetical
protein F19H6.1 protein.
Length = 302
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/97 (24%), Positives = 48/97 (49%)
Frame = +1
Query: 145 QNVVNEVKIISQVLSANLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECKATDKHIE 324
Q+ + E+ ++ Q+ N+IRYY + + + L VLE ++ +I+ K + I
Sbjct: 66 QDCLKEIDLLKQLNHVNVIRYYASFIDN--NQLNIVLELAEAGDMSRMIKHFKKGGRLIP 123
Query: 325 ESFIWRLLHELARVYKSVEEVNTVVLQKCLTPESVFV 435
E IW+ +LAR + ++ + + P +VF+
Sbjct: 124 EKTIWKYFVQLARALAHMHSKR--IMHRDIKPANVFI 158
>DQ645955-1|ABG36763.1| 302|Caenorhabditis elegans molting protein
MLT-1 protein.
Length = 302
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/97 (24%), Positives = 48/97 (49%)
Frame = +1
Query: 145 QNVVNEVKIISQVLSANLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECKATDKHIE 324
Q+ + E+ ++ Q+ N+IRYY + + + L VLE ++ +I+ K + I
Sbjct: 66 QDCLKEIDLLKQLNHVNVIRYYASFIDN--NQLNIVLELAEAGDMSRMIKHFKKGGRLIP 123
Query: 325 ESFIWRLLHELARVYKSVEEVNTVVLQKCLTPESVFV 435
E IW+ +LAR + ++ + + P +VF+
Sbjct: 124 EKTIWKYFVQLARALAHMHSKR--IMHRDIKPANVFI 158
>Z81140-4|CAJ55247.1| 463|Caenorhabditis elegans Hypothetical
protein W10G6.2b protein.
Length = 463
Score = 37.1 bits (82), Expect = 0.011
Identities = 46/155 (29%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Frame = +1
Query: 4 RMSEKLKDFQVLDVFCGGTF---YKVRHKVTNNIFAWKAYDCSAFSDEQI--QNVVNEVK 168
R + DF L G+F Y+VRHK T I+A K S E I +N V V
Sbjct: 127 RKTATANDFDYLTTIGKGSFGRVYQVRHKETKKIYAMK-----ILSKEHIRKKNEVKHVM 181
Query: 169 IISQVLSANLIRYYDTILH---SPSKTLYFVLEYNSWRNVQELIEECKATDKHIEESFIW 339
VL N + LH + LYFVL++ N EL + +KH ES
Sbjct: 182 AERNVLINNFKHPFLVSLHFSFQNKEKLYFVLDH---LNGGELFSHLQ-REKHFSESRSR 237
Query: 340 RLLHELARVYKSVEEVNTVVLQKCLTPESVFVQRK 444
E+A + E N ++ + L PE++ + K
Sbjct: 238 FYAAEIACALGYLHEKN--IIYRDLKPENLLLDDK 270
>Z81140-3|CAJ55246.1| 453|Caenorhabditis elegans Hypothetical
protein W10G6.2a protein.
Length = 453
Score = 37.1 bits (82), Expect = 0.011
Identities = 46/155 (29%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Frame = +1
Query: 4 RMSEKLKDFQVLDVFCGGTF---YKVRHKVTNNIFAWKAYDCSAFSDEQI--QNVVNEVK 168
R + DF L G+F Y+VRHK T I+A K S E I +N V V
Sbjct: 117 RKTATANDFDYLTTIGKGSFGRVYQVRHKETKKIYAMK-----ILSKEHIRKKNEVKHVM 171
Query: 169 IISQVLSANLIRYYDTILH---SPSKTLYFVLEYNSWRNVQELIEECKATDKHIEESFIW 339
VL N + LH + LYFVL++ N EL + +KH ES
Sbjct: 172 AERNVLINNFKHPFLVSLHFSFQNKEKLYFVLDH---LNGGELFSHLQ-REKHFSESRSR 227
Query: 340 RLLHELARVYKSVEEVNTVVLQKCLTPESVFVQRK 444
E+A + E N ++ + L PE++ + K
Sbjct: 228 FYAAEIACALGYLHEKN--IIYRDLKPENLLLDDK 260
>U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase
protein 29 protein.
Length = 822
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 73 RHKVTNNIFAWKAYDCSAFSDEQIQNVVNEVKIISQVLSANLIRYYDTILHSPSKTLYFV 252
RHK+ A K+ D SA E + + EVKI+ + ++++ Y+ + LY V
Sbjct: 34 RHKIAKTKVAIKSIDVSALDRENLIKLEREVKIVKVIDHPHIVKSYE--IMRVDNMLYIV 91
Query: 253 LEYNSWRNVQE-LIEECKATD 312
EY S + E LIE+ + +
Sbjct: 92 SEYCSSGELYETLIEKGRVAE 112
>AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threonine
kinase KIN-29 protein.
Length = 822
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 73 RHKVTNNIFAWKAYDCSAFSDEQIQNVVNEVKIISQVLSANLIRYYDTILHSPSKTLYFV 252
RHK+ A K+ D SA E + + EVKI+ + ++++ Y+ + LY V
Sbjct: 34 RHKIAKTKVAIKSIDVSALDRENLIKLEREVKIVKVIDHPHIVKSYE--IMRVDNMLYIV 91
Query: 253 LEYNSWRNVQE-LIEECKATD 312
EY S + E LIE+ + +
Sbjct: 92 SEYCSSGELYETLIEKGRVAE 112
>Z95122-2|CAB08355.1| 363|Caenorhabditis elegans Hypothetical
protein F42G10.2 protein.
Length = 363
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 SEKLKDFQVLDVFCGGTFYKVRHKVTNNIFAWKAYDCSAFSD-EQIQNVVNEVKIISQVL 186
S L+D + GT YK+RHK T + A K C+ EQI+ + I+
Sbjct: 63 SANLQDLGAIGNGNFGTVYKMRHKETGKLIAVKRIRCNNIGHREQIRLLREHDTIVKSEK 122
Query: 187 SANLIRYYDTI 219
N++++Y I
Sbjct: 123 GPNIVKFYGAI 133
>Z48230-2|CAA88264.1| 363|Caenorhabditis elegans Hypothetical
protein F42G10.2 protein.
Length = 363
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 SEKLKDFQVLDVFCGGTFYKVRHKVTNNIFAWKAYDCSAFSD-EQIQNVVNEVKIISQVL 186
S L+D + GT YK+RHK T + A K C+ EQI+ + I+
Sbjct: 63 SANLQDLGAIGNGNFGTVYKMRHKETGKLIAVKRIRCNNIGHREQIRLLREHDTIVKSEK 122
Query: 187 SANLIRYYDTI 219
N++++Y I
Sbjct: 123 GPNIVKFYGAI 133
>U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated
kinase CePAK protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +1
Query: 151 VVNEVKIISQVLSANLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECKATD 312
++NE+ ++ + AN++ Y D+ L L+ V+EY + ++ +++ EC+ D
Sbjct: 337 IINEILVMRENKHANIVNYLDSYL--VCDELWVVMEYLAGGSLTDVVTECQMED 388
>U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated
kinase family protein1, isoform c protein.
Length = 523
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +1
Query: 151 VVNEVKIISQVLSANLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECKATD 312
++NE+ ++ + AN++ Y D+ L L+ V+EY + ++ +++ EC+ D
Sbjct: 288 IINEILVMRENKHANIVNYLDSYL--VCDELWVVMEYLAGGSLTDVVTECQMED 339
>U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated
kinase family protein1, isoform a protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +1
Query: 151 VVNEVKIISQVLSANLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECKATD 312
++NE+ ++ + AN++ Y D+ L L+ V+EY + ++ +++ EC+ D
Sbjct: 337 IINEILVMRENKHANIVNYLDSYL--VCDELWVVMEYLAGGSLTDVVTECQMED 388
>U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated
kinase family protein1, isoform b protein.
Length = 569
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +1
Query: 151 VVNEVKIISQVLSANLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECKATD 312
++NE+ ++ + AN++ Y D+ L L+ V+EY + ++ +++ EC+ D
Sbjct: 334 IINEILVMRENKHANIVNYLDSYL--VCDELWVVMEYLAGGSLTDVVTECQMED 385
>D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase
protein.
Length = 569
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +1
Query: 151 VVNEVKIISQVLSANLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECKATD 312
++NE+ ++ + AN++ Y D+ L L+ V+EY + ++ +++ EC+ D
Sbjct: 334 IINEILVMRENKHANIVNYLDSYL--VCDELWVVMEYLAGGSLTDVVTECQMED 385
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 268 WRNVQELIEECKATDKHIEESFIWRLLHELARVYKSVE 381
W NV++ + A + E +++W L+ + RV S+E
Sbjct: 195 WENVRQKMTAAAADNNEFERTYLWNLIEKFKRVLNSLE 232
>AL132949-1|CAB61068.2| 463|Caenorhabditis elegans Hypothetical
protein Y53F4B.1 protein.
Length = 463
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/80 (21%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 127 FSDEQIQNVVNEVKIISQVLSA-NLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECK 303
++D++ +N+ E ++++ + + N++R Y P + + ++EY + N+ EL+ +
Sbjct: 56 YTDKERENIRREARVVAALNNCENVVRIYGICETLPFRGM--IMEYCAGPNLSELVFQLD 113
Query: 304 ATDKHIEESFIWRLLHELAR 363
E I++ H+L R
Sbjct: 114 ECKVKFETLRIFKWCHDLTR 133
>AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical
protein Y39G10AR.3 protein.
Length = 998
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/129 (20%), Positives = 55/129 (42%)
Frame = +1
Query: 55 GTFYKVRHKVTNNIFAWKAYDCSAFSDEQIQNVVNEVKIISQVLSANLIRYYDTILHSPS 234
G+ R + +++ K + Q + +NEV ++S++ N+I YYD+
Sbjct: 183 GSAVLYRRREDSSLVIIKEINMYDLDSSQRRLALNEVSLLSRIEHPNIIAYYDSF--EEE 240
Query: 235 KTLYFVLEYNSWRNVQELIEECKATDKHIEESFIWRLLHELARVYKSVEEVNTVVLQKCL 414
L +EY + +++ T ++E I ++ ++ + E VL + L
Sbjct: 241 GVLMIEMEYADGGTLAQMLSR---TQNLLDEEQIGDMMIQMCSAVAYLHE--NSVLHRDL 295
Query: 415 TPESVFVQR 441
+VF+ R
Sbjct: 296 KTANVFLTR 304
>AF099924-1|AAF23187.1| 348|Caenorhabditis elegans Cam kinase
protein 1 protein.
Length = 348
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +1
Query: 1 ARMSEKLKDFQVLDVFCGGTFYKV----RHKVTNNIFAWKAYDCSAFSDEQIQNVVNEVK 168
A + EK DF+ DV G F KV ++A K D A ++ +++ NE+K
Sbjct: 16 ATIREKY-DFR--DVLGTGAFSKVFLAESKSDAGQMYAVKCIDKKALKGKE-ESLENEIK 71
Query: 169 IISQVLSANLIRYYDTILHSPSKTLYFVLE 258
++ ++ N+++ +DT + + +Y V+E
Sbjct: 72 VLRKLRHNNIVQLFDT--YDEKQFVYLVME 99
>AB021864-1|BAA82674.1| 348|Caenorhabditis elegans
Ca2+/calmodulin-dependent proteinkinase I protein.
Length = 348
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +1
Query: 1 ARMSEKLKDFQVLDVFCGGTFYKV----RHKVTNNIFAWKAYDCSAFSDEQIQNVVNEVK 168
A + EK DF+ DV G F KV ++A K D A ++ +++ NE+K
Sbjct: 16 ATIREKY-DFR--DVLGTGAFSKVFLAESKSDAGQMYAVKCIDKKALKGKE-ESLENEIK 71
Query: 169 IISQVLSANLIRYYDTILHSPSKTLYFVLE 258
++ ++ N+++ +DT + + +Y V+E
Sbjct: 72 VLRKLRHNNIVQLFDT--YDEKQFVYLVME 99
>AY350451-1|AAQ54691.1| 332|Caenorhabditis elegans
calcium/calmodulin-dependent proteinkinase 1 protein.
Length = 332
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 40 DVFCGGTFYKV----RHKVTNNIFAWKAYDCSAFSDEQIQNVVNEVKIISQVLSANLIRY 207
DV G F KV ++A K D A ++ +++ NE+K++ ++ N+++
Sbjct: 10 DVLGTGAFSKVFLAESKSDAGQMYAVKCIDKKALKGKE-ESLENEIKVLRKLRHNNIVQL 68
Query: 208 YDTILHSPSKTLYFVLE 258
+DT + + +Y V+E
Sbjct: 69 FDT--YDEKQFVYLVME 83
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 357 GSSL*IGRRGEHCCVAEMPNARISLCA 437
G SL + G CV EM +R++ CA
Sbjct: 321 GRSLVVSTAGSRICVVEMETSRVTCCA 347
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/66 (19%), Positives = 33/66 (50%)
Frame = +1
Query: 151 VVNEVKIISQVLSANLIRYYDTILHSPSKTLYFVLEYNSWRNVQELIEECKATDKHIEES 330
++N+++ +S++ A ++ TI P K L + +Y S + + ++ CK +
Sbjct: 44 ILNKLRALSKINLALVLSRMPTIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNP 103
Query: 331 FIWRLL 348
+W+ +
Sbjct: 104 LLWKFV 109
>AC199170-8|ABO33266.1| 469|Caenorhabditis elegans Hypothetical
protein T08D2.7 protein.
Length = 469
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 145 QNVVNEVKIISQVLSANLIRYYDTILHSPSKTLYFVLEY 261
+++ NEV+++ ++ N++ YD I + +K Y V+EY
Sbjct: 216 RDIQNEVEVMKKLSHPNIVAIYDCI--TVAKYSYMVIEY 252
>Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical
protein T27D12.2b protein.
Length = 902
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 7 MSEKLKDFQVLDVFCGGTFYKVRHKVTNNIFAWKAYDCSAFSDEQIQNVVNEVKII 174
M E L+ F FCG FY +T ++ A C F + + + + EVK+I
Sbjct: 156 MLESLEQFNNYAAFCGWVFY-----ITGLVYL-AALVCYGFGKQAVGSGIPEVKVI 205
>Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical
protein T27D12.2a protein.
Length = 906
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 7 MSEKLKDFQVLDVFCGGTFYKVRHKVTNNIFAWKAYDCSAFSDEQIQNVVNEVKII 174
M E L+ F FCG FY +T ++ A C F + + + + EVK+I
Sbjct: 156 MLESLEQFNNYAAFCGWVFY-----ITGLVYL-AALVCYGFGKQAVGSGIPEVKVI 205
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 416 RQNQSLCSENGELRINCFNLTA-TGSTSDVMRQVGDLIHTICYTPNAC 556
R N CSE +N + T +TSD + LI+ + TPNAC
Sbjct: 226 RYNGGCCSETSIQVLNSSDSTRWILTTSDSWNKANALINLLYCTPNAC 273
>U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical protein
F10E7.8 protein.
Length = 929
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Frame = +1
Query: 259 YNSWRNV-------QELIEECKATDKHIEESFIWRLLHELARVYKSVEEVNTVVLQKCLT 417
Y WRNV + L + KA + ++ +++ L R++K V + + K +
Sbjct: 722 YFMWRNVFFAINLIRLLNKLVKAKNDRVKMLMVFKSAPVLKRLFKVRVSVLQLYVLKAIK 781
Query: 418 PESVFVQRKWRTSHQLFQFDRYRLYFRRDAPSWRFNS 528
+S ++ R+WR S+ Y R W F S
Sbjct: 782 MQSRYLGRQWRKSNMDIISAIYSRVRHRMTDDWAFAS 818
>D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein.
Length = 902
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 7 MSEKLKDFQVLDVFCGGTFYKVRHKVTNNIFAWKAYDCSAFSDEQIQNVVNEVKII 174
M E L+ F FCG FY +T ++ A C F + + + + EVK+I
Sbjct: 156 MLESLEQFNNYAAFCGWVFY-----ITGLVYL-AALVCYGFGKQAVGSGIPEVKVI 205
>AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 868
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 7 MSEKLKDFQVLDVFCGGTFYKVRHKVTNNIFAWKAYDCSAFSDEQIQNVVNEVKII 174
M E L+ F FCG FY +T ++ A C F + + + + EVK+I
Sbjct: 118 MLESLEQFNNYAAFCGWVFY-----ITGLVYL-AALVCYGFGKQAVGSGIPEVKVI 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,916,423
Number of Sequences: 27780
Number of extensions: 308936
Number of successful extensions: 1066
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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