Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1284
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    28   0.29 
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    24   4.7  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    23   8.2  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +1

Query: 223 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKL 402
           +P  F +V RGTV L    T     +  +   L K+P   D L Y    + FH++A +  
Sbjct: 503 LPFNFLMVRRGTVPLPARITALHLASVSSRSQLMKLPSSWDLLPYFW--FAFHWLAMSHS 560

Query: 403 VY----FCITDDKFQRSRAFLFLNEI 468
            Y    +C  + +F RS   L L+ +
Sbjct: 561 CYNPIIYCYMNARF-RSGFILVLHGV 585


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 181 GNIVFFVSFTRLFTMPILFSIVARGTVVLAKYATCQ 288
           GN+  F SFT L   P  +      T   A+  TC+
Sbjct: 472 GNV--FASFTHLQHAPFTYRFAVNNTTGAARRGTCR 505


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 181 GNIVFFVSFTRLFTMPILFSIVARGTVVLAKYATCQ 288
           GN+  F SFT L   P  F +    T    +  TC+
Sbjct: 471 GNV--FASFTHLQHAPFTFRLTVNNTSGRTRRGTCR 504


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,808
Number of Sequences: 2352
Number of extensions: 13382
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)