Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1284
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X92396-1|CAA63133.1| 220|Homo sapiens ORF protein. 180 3e-45
BC056141-1|AAH56141.1| 220|Homo sapiens synaptobrevin-like 1 pr... 180 3e-45
AJ295938-1|CAC16891.1| 260|Homo sapiens synaptobrevin like prot... 180 3e-45
AJ271736-1|CAB96816.1| 220|Homo sapiens synaptobrevin-like 1 pr... 180 3e-45
AK222794-1|BAD96514.1| 220|Homo sapiens synaptobrevin-like 1 va... 178 1e-44
AJ549301-1|CAD70593.2| 179|Homo sapiens tetanus insensitive VAM... 75 4e-20
>X92396-1|CAA63133.1| 220|Homo sapiens ORF protein.
Length = 220
Score = 180 bits (439), Expect = 3e-45
Identities = 81/137 (59%), Positives = 103/137 (75%)
Frame = +1
Query: 223 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKL 402
M ILF++VARGT +LAK+A C GNF EV EQIL+KIP ++KLTYSHGNYLFHYI ++++
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
Query: 403 VYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSES 582
VY CITDD F+RSRAF FLNEIK+R +PYAMNSEF VLA ++KH+SE+
Sbjct: 61 VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 583 RDLDNISRVHGELDELK 633
+ LD + ++DELK
Sbjct: 121 KGLDKVMETQAQVDELK 137
>BC056141-1|AAH56141.1| 220|Homo sapiens synaptobrevin-like 1
protein.
Length = 220
Score = 180 bits (439), Expect = 3e-45
Identities = 81/137 (59%), Positives = 103/137 (75%)
Frame = +1
Query: 223 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKL 402
M ILF++VARGT +LAK+A C GNF EV EQIL+KIP ++KLTYSHGNYLFHYI ++++
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
Query: 403 VYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSES 582
VY CITDD F+RSRAF FLNEIK+R +PYAMNSEF VLA ++KH+SE+
Sbjct: 61 VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 583 RDLDNISRVHGELDELK 633
+ LD + ++DELK
Sbjct: 121 KGLDKVMETQAQVDELK 137
>AJ295938-1|CAC16891.1| 260|Homo sapiens synaptobrevin like protein
1B protein.
Length = 260
Score = 180 bits (439), Expect = 3e-45
Identities = 81/137 (59%), Positives = 103/137 (75%)
Frame = +1
Query: 223 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKL 402
M ILF++VARGT +LAK+A C GNF EV EQIL+KIP ++KLTYSHGNYLFHYI ++++
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
Query: 403 VYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSES 582
VY CITDD F+RSRAF FLNEIK+R +PYAMNSEF VLA ++KH+SE+
Sbjct: 61 VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 583 RDLDNISRVHGELDELK 633
+ LD + ++DELK
Sbjct: 121 KGLDKVMETQAQVDELK 137
>AJ271736-1|CAB96816.1| 220|Homo sapiens synaptobrevin-like 1
protein protein.
Length = 220
Score = 180 bits (439), Expect = 3e-45
Identities = 81/137 (59%), Positives = 103/137 (75%)
Frame = +1
Query: 223 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKL 402
M ILF++VARGT +LAK+A C GNF EV EQIL+KIP ++KLTYSHGNYLFHYI ++++
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
Query: 403 VYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSES 582
VY CITDD F+RSRAF FLNEIK+R +PYAMNSEF VLA ++KH+SE+
Sbjct: 61 VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 583 RDLDNISRVHGELDELK 633
+ LD + ++DELK
Sbjct: 121 KGLDKVMETQAQVDELK 137
>AK222794-1|BAD96514.1| 220|Homo sapiens synaptobrevin-like 1
variant protein.
Length = 220
Score = 178 bits (434), Expect = 1e-44
Identities = 81/137 (59%), Positives = 102/137 (74%)
Frame = +1
Query: 223 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKL 402
M ILF++VARGT +LAK+A C GNF EV EQIL+KIP ++KLTYSHGNYLFHYI ++++
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
Query: 403 VYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSES 582
VY CITDD F+RSRAF FLNEIK+R PYAMNSEF VLA ++KH+SE+
Sbjct: 61 VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAPPYAMNSEFSSVLAAQLKHHSEN 120
Query: 583 RDLDNISRVHGELDELK 633
+ LD + ++DELK
Sbjct: 121 KGLDKVMETQAQVDELK 137
>AJ549301-1|CAD70593.2| 179|Homo sapiens tetanus insensitive VAMP
(Ti-VAMP) protein.
Length = 179
Score = 75.4 bits (177), Expect(2) = 4e-20
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +1
Query: 424 DKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSESRDLDNIS 603
+ F+RSRAF FLNEIK+R +PYAMNSEF VLA ++KH+SE++ LD +
Sbjct: 27 EDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVM 86
Query: 604 RVHGELDELK 633
++DELK
Sbjct: 87 ETQAQVDELK 96
Score = 42.7 bits (96), Expect(2) = 4e-20
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +1
Query: 223 MPILFSIVARGTVVLAKYATCQGNFTEVAEQ 315
M ILF++VARGT +LAK+A C GNF E E+
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEDFER 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,464,364
Number of Sequences: 237096
Number of extensions: 1682179
Number of successful extensions: 2770
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2770
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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