Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1281
(630 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061003-1|AAL28551.1| 461|Drosophila melanogaster HL01728p pro... 118 5e-27
AE014296-1650|AAF50276.1| 291|Drosophila melanogaster CG3967-PB... 118 5e-27
AE014296-1649|AAN11969.1| 461|Drosophila melanogaster CG3967-PE... 118 5e-27
AE014296-1648|AAN11968.1| 461|Drosophila melanogaster CG3967-PD... 118 5e-27
AE014296-1647|AAN11967.1| 461|Drosophila melanogaster CG3967-PC... 118 5e-27
AE014296-1646|AAF50275.2| 461|Drosophila melanogaster CG3967-PA... 118 5e-27
AY075251-1|AAL68118.1| 287|Drosophila melanogaster AT21637p pro... 94 1e-19
AE014298-2954|AAF45373.1| 287|Drosophila melanogaster CG17003-P... 94 1e-19
AF003342-1|AAB61239.1| 225|Drosophila melanogaster bunched prot... 29 5.2
L42511-1|AAC41607.1| 224|Drosophila melanogaster shortsighted c... 29 6.9
AE014134-2215|AAF53200.2| 219|Drosophila melanogaster CG5461-PB... 29 6.9
AE014134-55|AAZ66445.1| 199|Drosophila melanogaster CG33635-PA ... 29 6.9
>AY061003-1|AAL28551.1| 461|Drosophila melanogaster HL01728p
protein.
Length = 461
Score = 118 bits (285), Expect = 5e-27
Identities = 57/170 (33%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +3
Query: 54 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLGEYSSAAQGLNR 233
+E+ + + I ++ NL+ +TF G+ R ++++ID LG+ S+ +QGL++
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRRQCLDATSKMTEIIDQLGQLSATSQGLSK 61
Query: 234 VITTGEKLRLCPSHVVYILKDKDAKNGEGEAVGMLKIGRKHLFLFDDKEQVRELEPL-CV 410
+TT ++LR+ + +Y+L D +A + G +G+LK+G K+L+LFD+ + R +E +
Sbjct: 62 PVTTAQRLRMSDNQTIYLLADNEAGH-NGAVLGLLKVGTKNLYLFDEAGKTRMVEQTPSI 120
Query: 411 LDFYVVCNRQRTGCGKKLFDFMLKDTESDVHALAIDGPSHKMEQXLKRNY 560
LDFYV +RQR G GK+LF ML + + ++D PS K+ L ++Y
Sbjct: 121 LDFYVHESRQRAGLGKRLFQTMLNEEQWTARKCSVDRPSEKLLSFLSKHY 170
>AE014296-1650|AAF50276.1| 291|Drosophila melanogaster CG3967-PB,
isoform B protein.
Length = 291
Score = 118 bits (285), Expect = 5e-27
Identities = 57/170 (33%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +3
Query: 54 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLGEYSSAAQGLNR 233
+E+ + + I ++ NL+ +TF G+ R ++++ID LG+ S+ +QGL++
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRRQCLDATSKMTEIIDQLGQLSATSQGLSK 61
Query: 234 VITTGEKLRLCPSHVVYILKDKDAKNGEGEAVGMLKIGRKHLFLFDDKEQVRELEPL-CV 410
+TT ++LR+ + +Y+L D +A + G +G+LK+G K+L+LFD+ + R +E +
Sbjct: 62 PVTTAQRLRMSDNQTIYLLADNEAGH-NGAVLGLLKVGTKNLYLFDEAGKTRMVEQTPSI 120
Query: 411 LDFYVVCNRQRTGCGKKLFDFMLKDTESDVHALAIDGPSHKMEQXLKRNY 560
LDFYV +RQR G GK+LF ML + + ++D PS K+ L ++Y
Sbjct: 121 LDFYVHESRQRAGLGKRLFQTMLNEEQWTARKCSVDRPSEKLLSFLSKHY 170
>AE014296-1649|AAN11969.1| 461|Drosophila melanogaster CG3967-PE,
isoform E protein.
Length = 461
Score = 118 bits (285), Expect = 5e-27
Identities = 57/170 (33%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +3
Query: 54 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLGEYSSAAQGLNR 233
+E+ + + I ++ NL+ +TF G+ R ++++ID LG+ S+ +QGL++
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRRQCLDATSKMTEIIDQLGQLSATSQGLSK 61
Query: 234 VITTGEKLRLCPSHVVYILKDKDAKNGEGEAVGMLKIGRKHLFLFDDKEQVRELEPL-CV 410
+TT ++LR+ + +Y+L D +A + G +G+LK+G K+L+LFD+ + R +E +
Sbjct: 62 PVTTAQRLRMSDNQTIYLLADNEAGH-NGAVLGLLKVGTKNLYLFDEAGKTRMVEQTPSI 120
Query: 411 LDFYVVCNRQRTGCGKKLFDFMLKDTESDVHALAIDGPSHKMEQXLKRNY 560
LDFYV +RQR G GK+LF ML + + ++D PS K+ L ++Y
Sbjct: 121 LDFYVHESRQRAGLGKRLFQTMLNEEQWTARKCSVDRPSEKLLSFLSKHY 170
>AE014296-1648|AAN11968.1| 461|Drosophila melanogaster CG3967-PD,
isoform D protein.
Length = 461
Score = 118 bits (285), Expect = 5e-27
Identities = 57/170 (33%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +3
Query: 54 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLGEYSSAAQGLNR 233
+E+ + + I ++ NL+ +TF G+ R ++++ID LG+ S+ +QGL++
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRRQCLDATSKMTEIIDQLGQLSATSQGLSK 61
Query: 234 VITTGEKLRLCPSHVVYILKDKDAKNGEGEAVGMLKIGRKHLFLFDDKEQVRELEPL-CV 410
+TT ++LR+ + +Y+L D +A + G +G+LK+G K+L+LFD+ + R +E +
Sbjct: 62 PVTTAQRLRMSDNQTIYLLADNEAGH-NGAVLGLLKVGTKNLYLFDEAGKTRMVEQTPSI 120
Query: 411 LDFYVVCNRQRTGCGKKLFDFMLKDTESDVHALAIDGPSHKMEQXLKRNY 560
LDFYV +RQR G GK+LF ML + + ++D PS K+ L ++Y
Sbjct: 121 LDFYVHESRQRAGLGKRLFQTMLNEEQWTARKCSVDRPSEKLLSFLSKHY 170
>AE014296-1647|AAN11967.1| 461|Drosophila melanogaster CG3967-PC,
isoform C protein.
Length = 461
Score = 118 bits (285), Expect = 5e-27
Identities = 57/170 (33%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +3
Query: 54 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLGEYSSAAQGLNR 233
+E+ + + I ++ NL+ +TF G+ R ++++ID LG+ S+ +QGL++
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRRQCLDATSKMTEIIDQLGQLSATSQGLSK 61
Query: 234 VITTGEKLRLCPSHVVYILKDKDAKNGEGEAVGMLKIGRKHLFLFDDKEQVRELEPL-CV 410
+TT ++LR+ + +Y+L D +A + G +G+LK+G K+L+LFD+ + R +E +
Sbjct: 62 PVTTAQRLRMSDNQTIYLLADNEAGH-NGAVLGLLKVGTKNLYLFDEAGKTRMVEQTPSI 120
Query: 411 LDFYVVCNRQRTGCGKKLFDFMLKDTESDVHALAIDGPSHKMEQXLKRNY 560
LDFYV +RQR G GK+LF ML + + ++D PS K+ L ++Y
Sbjct: 121 LDFYVHESRQRAGLGKRLFQTMLNEEQWTARKCSVDRPSEKLLSFLSKHY 170
>AE014296-1646|AAF50275.2| 461|Drosophila melanogaster CG3967-PA,
isoform A protein.
Length = 461
Score = 118 bits (285), Expect = 5e-27
Identities = 57/170 (33%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +3
Query: 54 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLGEYSSAAQGLNR 233
+E+ + + I ++ NL+ +TF G+ R ++++ID LG+ S+ +QGL++
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRRQCLDATSKMTEIIDQLGQLSATSQGLSK 61
Query: 234 VITTGEKLRLCPSHVVYILKDKDAKNGEGEAVGMLKIGRKHLFLFDDKEQVRELEPL-CV 410
+TT ++LR+ + +Y+L D +A + G +G+LK+G K+L+LFD+ + R +E +
Sbjct: 62 PVTTAQRLRMSDNQTIYLLADNEAGH-NGAVLGLLKVGTKNLYLFDEAGKTRMVEQTPSI 120
Query: 411 LDFYVVCNRQRTGCGKKLFDFMLKDTESDVHALAIDGPSHKMEQXLKRNY 560
LDFYV +RQR G GK+LF ML + + ++D PS K+ L ++Y
Sbjct: 121 LDFYVHESRQRAGLGKRLFQTMLNEEQWTARKCSVDRPSEKLLSFLSKHY 170
>AY075251-1|AAL68118.1| 287|Drosophila melanogaster AT21637p
protein.
Length = 287
Score = 94.3 bits (224), Expect = 1e-19
Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
Frame = +3
Query: 174 LSKLIDVLGEYSSAAQGLNRVITTGEKLRLCPSHVVYILKDKDAKNGEGEAVGMLKIGRK 353
LS++++++G+ S+ AQGL +T+ +KL VVY++ DK A G E G+LK+G K
Sbjct: 49 LSEILNIMGKLSADAQGLCHAVTSADKL--ASDQVVYLMADKAA--GHWEITGLLKVGTK 104
Query: 354 HLFLFDDKEQVRELEPL-CVLDFYVVCNRQRTGCGKKLFDFMLKDTESDVHALAIDGPSH 530
LF+FD R L +LDFYV +RQR G GK LF++ML+ H +D PS+
Sbjct: 105 DLFVFDQGGCYRRLNQTPAILDFYVHESRQRCGQGKLLFEWMLEKQGWSAHKCTVDRPSN 164
Query: 531 KMEQXLKRNYRRGASRPPKQQFXCF 605
KM + ++Y + P F +
Sbjct: 165 KMLAFMAKHYGLVRTIPQGNNFVLY 189
>AE014298-2954|AAF45373.1| 287|Drosophila melanogaster CG17003-PA
protein.
Length = 287
Score = 94.3 bits (224), Expect = 1e-19
Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
Frame = +3
Query: 174 LSKLIDVLGEYSSAAQGLNRVITTGEKLRLCPSHVVYILKDKDAKNGEGEAVGMLKIGRK 353
LS++++++G+ S+ AQGL +T+ +KL VVY++ DK A G E G+LK+G K
Sbjct: 49 LSEILNIMGKLSADAQGLCHAVTSADKL--ASDQVVYLMADKAA--GHWEITGLLKVGTK 104
Query: 354 HLFLFDDKEQVRELEPL-CVLDFYVVCNRQRTGCGKKLFDFMLKDTESDVHALAIDGPSH 530
LF+FD R L +LDFYV +RQR G GK LF++ML+ H +D PS+
Sbjct: 105 DLFVFDQGGCYRRLNQTPAILDFYVHESRQRCGQGKLLFEWMLEKQGWSAHKCTVDRPSN 164
Query: 531 KMEQXLKRNYRRGASRPPKQQFXCF 605
KM + ++Y + P F +
Sbjct: 165 KMLAFMAKHYGLVRTIPQGNNFVLY 189
>AF003342-1|AAB61239.1| 225|Drosophila melanogaster bunched
protein.
Length = 225
Score = 29.1 bits (62), Expect = 5.2
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 500 DVALRVLEHEIEKFLP-ASGALAVADHVEVEDAERLQLAHLFLVV-EQKQVL 351
D V+ I+ FLP ASG AVA ++E A L +HL + V E+ +VL
Sbjct: 32 DPVCEVVMKYIDYFLPDASGTSAVAIDNKIEQAMDLVKSHLMIAVREEVEVL 83
>L42511-1|AAC41607.1| 224|Drosophila melanogaster shortsighted
class 1 protein.
Length = 224
Score = 28.7 bits (61), Expect = 6.9
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 500 DVALRVLEHEIEKFLP-ASGALAVADHVEVEDAERLQLAHLFLVV-EQKQVL 351
D V+ I+ FLP ASG AVA ++E A L +HL + V E+ +VL
Sbjct: 31 DPVREVVMKYIDYFLPDASGTSAVAIDNKIEQAMDLVKSHLMIAVREEVEVL 82
>AE014134-2215|AAF53200.2| 219|Drosophila melanogaster CG5461-PB,
isoform B protein.
Length = 219
Score = 28.7 bits (61), Expect = 6.9
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 500 DVALRVLEHEIEKFLP-ASGALAVADHVEVEDAERLQLAHLFLVV-EQKQVL 351
D V+ I+ FLP ASG AVA ++E A L +HL + V E+ +VL
Sbjct: 31 DPVREVVMKYIDYFLPDASGTSAVAIDNKIEQAMDLVKSHLMIAVREEVEVL 82
>AE014134-55|AAZ66445.1| 199|Drosophila melanogaster CG33635-PA
protein.
Length = 199
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 362 KQVLATNLQHADCLALTVFCILVFK 288
K L T+L ++ CL LT++C LV K
Sbjct: 124 KPRLLTSLSYSSCLILTLYCALVAK 148
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,485,034
Number of Sequences: 53049
Number of extensions: 556636
Number of successful extensions: 1442
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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