Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1277
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   105   1e-24
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     26   1.4  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   5.6  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   5.6  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   7.4  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  105 bits (252), Expect = 1e-24
 Identities = 47/75 (62%), Positives = 57/75 (76%)
 Frame = +1

Query: 223 DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 402
           D GS +  +KDKFQ+NLDVQ FSPEEISVK  D  V+VEGKHEE+QD+HGY+SR F RRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 403 ALPENCNPDTVESSV 447
            LP+  N   + SS+
Sbjct: 63  MLPKGHNEADIVSSL 77



 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = +2

Query: 446 LSSDGVLTVIAPRTPAATKN-ERAVPITQTG 535
           LSSDG+LT+  PR     KN ER++PIT TG
Sbjct: 77  LSSDGILTITCPRKEIEQKNEERSIPITHTG 107


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 183 LLPAVEADGDGQ*RRRFHHHLE*GQIPGQLRRSTLFARRNLSE 311
           +L +V+     Q  + +H++LE GQ PGQL  S + A  ++ E
Sbjct: 143 VLMSVQGGASKQALKYYHYYLE-GQPPGQLLSSIIAAVYSVPE 184


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 14/54 (25%), Positives = 21/54 (38%)
 Frame = -2

Query: 538 GPGLSDGNSSLVLRGSRSPGSDHGQHAVRGQPKIRQCQGCSFQAERNAA*TDER 377
           G G   GN+ +        G+D   H + G+  I Q Q    Q    A   D++
Sbjct: 586 GSGGDRGNAGVPDDTKHGDGTDGSNHLMAGKESISQHQQSQLQHSHQAQSLDQQ 639


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 249 IRGDGGTDVSIGHRHLLPRPVVISGHR 169
           +RG  G +V I H   +PRP + +  R
Sbjct: 466 VRGCFGEEVDIAHPVTVPRPAITAPTR 492


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 24  SLDISHPKTKYKNVTAAIHPGIPT*PPSR 110
           +++++ PK +Y NVT+  H  +   P  R
Sbjct: 695 NMEVNKPKNRYANVTSYDHSRVILPPIER 723


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,307
Number of Sequences: 2352
Number of extensions: 13800
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)