Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1275
(620 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical pr... 279 9e-76
U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical pr... 279 9e-76
U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical pr... 279 9e-76
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 279 9e-76
Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical pr... 90 1e-18
Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 31 0.66
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 31 0.88
AL132877-11|CAB60853.1| 214|Caenorhabditis elegans Hypothetical... 30 1.2
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 29 2.0
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 29 2.0
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 29 3.5
M22363-2|AAA28159.1| 429|Caenorhabditis elegans protein ( C.ele... 28 4.7
M22363-1|AAA28158.1| 467|Caenorhabditis elegans protein ( C.ele... 28 4.7
L10990-6|AAB59176.1| 467|Caenorhabditis elegans Uncoordinated p... 28 4.7
L10990-5|AAB59175.1| 429|Caenorhabditis elegans Uncoordinated p... 28 4.7
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 28 6.2
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 28 6.2
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 27 8.2
>U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical
protein R151.2c protein.
Length = 318
Score = 279 bits (685), Expect = 9e-76
Identities = 127/169 (75%), Positives = 152/169 (89%)
Frame = +3
Query: 3 FDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPDAGGAKRVTSIADRLNVEFALIHKERK 182
FDIPVDNL+AEPA+LK+IKE+IP+W+TS++VSPDAGGAKRVTSIADRLNV+FALIHKE K
Sbjct: 137 FDIPVDNLYAEPAILKYIKESIPNWQTSVIVSPDAGGAKRVTSIADRLNVDFALIHKESK 196
Query: 183 KANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTHGIFSGPA 362
+ANEV M LVG V+ + AILVDDMADTCGTIC AA+KL+EAGA KVYA HGIFSGPA
Sbjct: 197 RANEVEKMTLVGSVEGKVAILVDDMADTCGTICMAADKLVEAGADKVYAFCVHGIFSGPA 256
Query: 363 ISRINNACLEAVVVTNTIPQERHMQECPKIQCIDVSMMLAEAVRRTHNG 509
++R+N + EAVVVTNTIPQ+ +M++C KIQCID+SM+LAEA+RRTHNG
Sbjct: 257 LTRLNASKFEAVVVTNTIPQDENMKKCSKIQCIDISMILAEAIRRTHNG 305
>U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical
protein R151.2b protein.
Length = 319
Score = 279 bits (685), Expect = 9e-76
Identities = 127/169 (75%), Positives = 152/169 (89%)
Frame = +3
Query: 3 FDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPDAGGAKRVTSIADRLNVEFALIHKERK 182
FDIPVDNL+AEPA+LK+IKE+IP+W+TS++VSPDAGGAKRVTSIADRLNV+FALIHKE K
Sbjct: 138 FDIPVDNLYAEPAILKYIKESIPNWQTSVIVSPDAGGAKRVTSIADRLNVDFALIHKESK 197
Query: 183 KANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTHGIFSGPA 362
+ANEV M LVG V+ + AILVDDMADTCGTIC AA+KL+EAGA KVYA HGIFSGPA
Sbjct: 198 RANEVEKMTLVGSVEGKVAILVDDMADTCGTICMAADKLVEAGADKVYAFCVHGIFSGPA 257
Query: 363 ISRINNACLEAVVVTNTIPQERHMQECPKIQCIDVSMMLAEAVRRTHNG 509
++R+N + EAVVVTNTIPQ+ +M++C KIQCID+SM+LAEA+RRTHNG
Sbjct: 258 LTRLNASKFEAVVVTNTIPQDENMKKCSKIQCIDISMILAEAIRRTHNG 306
>U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical
protein R151.2a protein.
Length = 377
Score = 279 bits (685), Expect = 9e-76
Identities = 127/169 (75%), Positives = 152/169 (89%)
Frame = +3
Query: 3 FDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPDAGGAKRVTSIADRLNVEFALIHKERK 182
FDIPVDNL+AEPA+LK+IKE+IP+W+TS++VSPDAGGAKRVTSIADRLNV+FALIHKE K
Sbjct: 196 FDIPVDNLYAEPAILKYIKESIPNWQTSVIVSPDAGGAKRVTSIADRLNVDFALIHKESK 255
Query: 183 KANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTHGIFSGPA 362
+ANEV M LVG V+ + AILVDDMADTCGTIC AA+KL+EAGA KVYA HGIFSGPA
Sbjct: 256 RANEVEKMTLVGSVEGKVAILVDDMADTCGTICMAADKLVEAGADKVYAFCVHGIFSGPA 315
Query: 363 ISRINNACLEAVVVTNTIPQERHMQECPKIQCIDVSMMLAEAVRRTHNG 509
++R+N + EAVVVTNTIPQ+ +M++C KIQCID+SM+LAEA+RRTHNG
Sbjct: 316 LTRLNASKFEAVVVTNTIPQDENMKKCSKIQCIDISMILAEAIRRTHNG 364
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 279 bits (685), Expect = 9e-76
Identities = 127/169 (75%), Positives = 152/169 (89%)
Frame = +3
Query: 3 FDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPDAGGAKRVTSIADRLNVEFALIHKERK 182
FDIPVDNL+AEPA+LK+IKE+IP+W+TS++VSPDAGGAKRVTSIADRLNV+FALIHKE K
Sbjct: 265 FDIPVDNLYAEPAILKYIKESIPNWQTSVIVSPDAGGAKRVTSIADRLNVDFALIHKESK 324
Query: 183 KANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTHGIFSGPA 362
+ANEV M LVG V+ + AILVDDMADTCGTIC AA+KL+EAGA KVYA HGIFSGPA
Sbjct: 325 RANEVEKMTLVGSVEGKVAILVDDMADTCGTICMAADKLVEAGADKVYAFCVHGIFSGPA 384
Query: 363 ISRINNACLEAVVVTNTIPQERHMQECPKIQCIDVSMMLAEAVRRTHNG 509
++R+N + EAVVVTNTIPQ+ +M++C KIQCID+SM+LAEA+RRTHNG
Sbjct: 385 LTRLNASKFEAVVVTNTIPQDENMKKCSKIQCIDISMILAEAIRRTHNG 433
>Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical
protein W04G3.5 protein.
Length = 353
Score = 89.8 bits (213), Expect = 1e-18
Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 28/196 (14%)
Frame = +3
Query: 3 FDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPDAGGAKRVTSIADRLNVEFALIHKERK 182
F PVDNL A P L+ IK NIPD+K +I+V+ G + TS ADRL + A+IH E+K
Sbjct: 144 FSCPVDNLRASPFFLQHIKTNIPDYKNAIIVAKSPGVMNKATSYADRLRLGVAVIHGEQK 203
Query: 183 KANE-------------VASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKV 323
E V S + + + + + D G I + +I+ + V
Sbjct: 204 DEEESGLEDGRQSPPPNVTSYDFLPAQESKQKPPLTVVGDVGGRIAIMVDDIIDDAQSFV 263
Query: 324 YA--------------ILTHGIFSGPAISRINNACLEAVVVTNTIPQERHMQECPKIQCI 461
A I THG+ S A + + + + V+VTNT+P + C KI+ +
Sbjct: 264 AAAEVLKARGAYKIYVIATHGVLSSDAPALLEASPITEVIVTNTVPHDLQKMRCHKIKTV 323
Query: 462 DVSMMLAEAVRRT-HN 506
DVS+M+ EA+RR HN
Sbjct: 324 DVSLMICEAIRRIFHN 339
>Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical
protein C37E2.3 protein.
Length = 295
Score = 31.5 bits (68), Expect = 0.50
Identities = 9/28 (32%), Positives = 21/28 (75%)
Frame = +2
Query: 521 HTSSLMFHISYFVFYFLLILGLRFFNNV 604
+++S M + Y FYF+++LG++++N +
Sbjct: 218 NSTSWMISVVYVTFYFIIVLGVKYYNRM 245
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
protein T21C12.1a protein.
Length = 1106
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -2
Query: 496 RLTASASIIDTSMHCIFGHSCMCLSWGIVFVTTTASKQALLILDIA 359
RL S S+ DT HC+ S +CL +G+ +T L++ +I+
Sbjct: 716 RLQKSISLADTVSHCLSLSSIVCLLFGLFPLTKFNCSSLLVVYEIS 761
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 30.7 bits (66), Expect = 0.88
Identities = 24/80 (30%), Positives = 33/80 (41%)
Frame = +3
Query: 114 AKRVTSIADRLNVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAE 293
++ +TS + N F L+ + N M VGD+K R VDD+A+ I E
Sbjct: 472 SRPITSEEKKANQMFFLLDETAFNRNATRYMS-VGDLKSRYGDKVDDVAEEIAVILRIME 530
Query: 294 KLIEAGATKVYAILTHGIFS 353
KL Y G FS
Sbjct: 531 KLWHVFMPDSYIRTMTGDFS 550
>AL132877-11|CAB60853.1| 214|Caenorhabditis elegans Hypothetical
protein Y105E8B.5 protein.
Length = 214
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +3
Query: 126 TSIADRLNVEFALI--HKERKKANEVASMVL--VGDVKDRTAILVDDMADTCGTICHAAE 293
+S + + V+F + ++++ ++ M L + ++K ++ ++VDD++DT T+
Sbjct: 84 SSCPEPMTVDFIRVKSYEDQMSTGQIQIMGLSNLDELKGKSVLVVDDISDTGRTLAKLLS 143
Query: 294 KLIEAGATKVYAIL 335
L E G K + L
Sbjct: 144 TLHETGVEKTWTAL 157
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 29.5 bits (63), Expect = 2.0
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = -2
Query: 277 IVPQVSAMSSTKMAVLSLTSPTSTI-EATSLAFFLSLWIKANST----FKRSAIDVTLLA 113
++ +VSA LS+T+P STI E S+ +SL ++ T F R D++
Sbjct: 482 VLAEVSAEPQRPPVTLSMTAPVSTIAEFDSMLNSISLHNESLETVAEPFSRLKTDISF-- 539
Query: 112 PPASGDTTMLVFQSGMFSLIHFNTAGSAKRLSTGIS 5
P +TT +SG SL + SA+RLS G+S
Sbjct: 540 PSTVEETTP---RSGRVSL----DSESARRLSAGLS 568
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 29.5 bits (63), Expect = 2.0
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = -2
Query: 277 IVPQVSAMSSTKMAVLSLTSPTSTI-EATSLAFFLSLWIKANST----FKRSAIDVTLLA 113
++ +VSA LS+T+P STI E S+ +SL ++ T F R D++
Sbjct: 480 VLAEVSAEPQRPPVTLSMTAPVSTIAEFDSMLNSISLHNESLETVAEPFSRLKTDISF-- 537
Query: 112 PPASGDTTMLVFQSGMFSLIHFNTAGSAKRLSTGIS 5
P +TT +SG SL + SA+RLS G+S
Sbjct: 538 PSTVEETTP---RSGRVSL----DSESARRLSAGLS 566
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/93 (23%), Positives = 39/93 (41%)
Frame = -2
Query: 292 SAAWQIVPQVSAMSSTKMAVLSLTSPTSTIEATSLAFFLSLWIKANSTFKRSAIDVTLLA 113
S W + ++ +ST+ + S + TST ++TS +S T + T +
Sbjct: 98 SPVWTNCTETTSTASTEFTISSTSLKTSTSDSTSTEPRISTTTDTKDTTTEDPVSSTDQS 157
Query: 112 PPASGDTTMLVFQSGMFSLIHFNTAGSAKRLST 14
+ +TT G S +T GS +R S+
Sbjct: 158 STSPHETTRDTTTEGTTSEDSTSTYGSTERSSS 190
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 29.5 bits (63), Expect = 2.0
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = -2
Query: 277 IVPQVSAMSSTKMAVLSLTSPTSTI-EATSLAFFLSLWIKANST----FKRSAIDVTLLA 113
++ +VSA LS+T+P STI E S+ +SL ++ T F R D++
Sbjct: 482 VLAEVSAEPQRPPVTLSMTAPVSTIAEFDSMLNSISLHNESLETVAEPFSRLKTDISF-- 539
Query: 112 PPASGDTTMLVFQSGMFSLIHFNTAGSAKRLSTGIS 5
P +TT +SG SL + SA+RLS G+S
Sbjct: 540 PSTVEETTP---RSGRVSL----DSESARRLSAGLS 568
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 29.5 bits (63), Expect = 2.0
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = -2
Query: 277 IVPQVSAMSSTKMAVLSLTSPTSTI-EATSLAFFLSLWIKANST----FKRSAIDVTLLA 113
++ +VSA LS+T+P STI E S+ +SL ++ T F R D++
Sbjct: 480 VLAEVSAEPQRPPVTLSMTAPVSTIAEFDSMLNSISLHNESLETVAEPFSRLKTDISF-- 537
Query: 112 PPASGDTTMLVFQSGMFSLIHFNTAGSAKRLSTGIS 5
P +TT +SG SL + SA+RLS G+S
Sbjct: 538 PSTVEETTP---RSGRVSL----DSESARRLSAGLS 566
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -2
Query: 352 EKIP*VKIAYTLVAPASINFSAAWQIVPQVSAMSSTKMAVLSLTSPTSTIEATSLAFFLS 173
+ +P V Y P +I +S WQIV +SS + L T + ++ ++ +S
Sbjct: 3859 KSVPSVDEPYLFGLPENIKYS--WQIVEADRTISSIRTLALGDTKNALSDQSDKISQIVS 3916
Query: 172 LWIK 161
LW K
Sbjct: 3917 LWKK 3920
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +2
Query: 464 RVNDAGRGCQTYTQWGNLFHTSSLMFHISY-----FVFYFLLILGLRFF 595
R++D + WGN FH +HI Y F+ +++LI + F+
Sbjct: 60 RIHDQEPEVKEPETWGNRFHRMYKEYHIKYLFPLIFIMFYMLIGAIIFY 108
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +2
Query: 464 RVNDAGRGCQTYTQWGNLFHTSSLMFHISY-----FVFYFLLILGLRFF 595
R++D + WGN FH +HI Y F+ +++LI + F+
Sbjct: 60 RIHDQEPEVKEPETWGNRFHRMYKEYHIKYLFPLIFIMFYMLIGAIIFY 108
>M22363-2|AAA28159.1| 429|Caenorhabditis elegans protein (
C.elegans unc-86 geneencoding two alternative proteins,
complete cds. ).
Length = 429
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 134 NRCHPFSTTSIRGHNN-ACFPV 72
N HPFSTTSI NN A +P+
Sbjct: 200 NMTHPFSTTSIASSNNLARYPI 221
>M22363-1|AAA28158.1| 467|Caenorhabditis elegans protein (
C.elegans unc-86 geneencoding two alternative proteins,
complete cds. ).
Length = 467
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 134 NRCHPFSTTSIRGHNN-ACFPV 72
N HPFSTTSI NN A +P+
Sbjct: 238 NMTHPFSTTSIASSNNLARYPI 259
>L10990-6|AAB59176.1| 467|Caenorhabditis elegans Uncoordinated
protein 86, isoform b protein.
Length = 467
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 134 NRCHPFSTTSIRGHNN-ACFPV 72
N HPFSTTSI NN A +P+
Sbjct: 238 NMTHPFSTTSIASSNNLARYPI 259
>L10990-5|AAB59175.1| 429|Caenorhabditis elegans Uncoordinated
protein 86, isoform a protein.
Length = 429
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 134 NRCHPFSTTSIRGHNN-ACFPV 72
N HPFSTTSI NN A +P+
Sbjct: 200 NMTHPFSTTSIASSNNLARYPI 221
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 171 KERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAI 332
++ K+ + S ++ +V+ +TA V+DM T GT + ATK+ ++
Sbjct: 506 EKMKQRIDAMSYTVIAEVQHQTAEKVEDMKSTMGTYLKKQAMFYQEVATKLTSL 559
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 171 KERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAI 332
++ K+ + S ++ +V+ +TA V+DM T GT + ATK+ ++
Sbjct: 508 EKMKQRIDAMSYTVIAEVQHQTAEKVEDMKSTMGTYLKKQAMFYQEVATKLTSL 561
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 171 KERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAI 332
++ K+ + S ++ +V+ +TA V+DM T GT + ATK+ ++
Sbjct: 534 EKMKQRIDAMSYTVIAEVQHQTAEKVEDMKSTMGTYLKKQAMFYQEVATKLTSL 587
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 112 PPASGDTTMLVFQSGMFSLIHF 47
PP G++T L F G F +HF
Sbjct: 386 PPEVGNSTRLRFNGGSFGFVHF 407
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 112 PPASGDTTMLVFQSGMFSLIHF 47
PP G++T L F G F +HF
Sbjct: 386 PPEVGNSTRLRFNGGSFGFVHF 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,295,929
Number of Sequences: 27780
Number of extensions: 341363
Number of successful extensions: 1010
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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