BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1273 (386 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014134-1938|AAF52997.2| 326|Drosophila melanogaster CG6431-PA... 30 1.2 AY119186-1|AAM51046.1| 574|Drosophila melanogaster SD10846p pro... 29 1.6 AE014297-971|AAF54403.1| 574|Drosophila melanogaster CG8228-PA ... 29 1.6 >AE014134-1938|AAF52997.2| 326|Drosophila melanogaster CG6431-PA protein. Length = 326 Score = 29.9 bits (64), Expect = 1.2 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 256 FEGLPVVNGCYPVGGCKNLLRLNGLCMPFLFSVVLHKY 369 F G+P NGC + G K L ++G PF F+ ++ +Y Sbjct: 281 FMGVPCPNGCLNLSGSKR-LPVSGKVNPFEFASLIREY 317 >AY119186-1|AAM51046.1| 574|Drosophila melanogaster SD10846p protein. Length = 574 Score = 29.5 bits (63), Expect = 1.6 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = -2 Query: 265 TLQTKIHDLLHIK-NRLNSSNNP 200 T Q +H+LLHIK NRL+ SN P Sbjct: 235 TYQAMVHELLHIKNNRLDLSNCP 257 >AE014297-971|AAF54403.1| 574|Drosophila melanogaster CG8228-PA protein. Length = 574 Score = 29.5 bits (63), Expect = 1.6 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = -2 Query: 265 TLQTKIHDLLHIK-NRLNSSNNP 200 T Q +H+LLHIK NRL+ SN P Sbjct: 235 TYQAMVHELLHIKNNRLDLSNCP 257 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,905,445 Number of Sequences: 53049 Number of extensions: 364991 Number of successful extensions: 563 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 556 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 563 length of database: 24,988,368 effective HSP length: 77 effective length of database: 20,903,595 effective search space used: 1066083345 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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