Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1269
(703 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 364 e-101
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 364 e-101
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 364 e-101
03_01_0034 + 318432-318825,318902-319851 364 e-101
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 362 e-100
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 362 e-100
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 349 1e-96
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 341 3e-94
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 198 3e-51
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 195 3e-50
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 195 3e-50
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 173 1e-43
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 138 3e-33
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 29 4.7
03_02_0310 + 7315185-7316820,7318332-7318879 29 4.7
07_01_1194 - 11325882-11326337,11327152-11327262 28 6.2
04_04_0504 + 25718364-25718700,25718993-25719102,25719230-25719331 28 6.2
04_01_0500 - 6540769-6541482,6541819-6541877,6541965-6542064,654... 28 6.2
06_03_0244 + 18637406-18637511,18637576-18638123 28 8.3
02_02_0462 + 10544939-10545130,10545520-10545609 28 8.3
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 364 bits (896), Expect = e-101
Identities = 169/224 (75%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ PT+GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQML++
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 364 bits (896), Expect = e-101
Identities = 169/224 (75%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ PT+GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQML++
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 364 bits (896), Expect = e-101
Identities = 169/224 (75%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ PT+GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQML++
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 364 bits (895), Expect = e-101
Identities = 169/224 (75%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+DAVLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQML++
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 362 bits (890), Expect = e-100
Identities = 167/224 (74%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 290 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 349
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+
Sbjct: 350 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 409
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPEL
Sbjct: 410 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 469
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+++
Sbjct: 470 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 513
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 362 bits (890), Expect = e-100
Identities = 167/224 (74%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+++
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 349 bits (858), Expect = 1e-96
Identities = 169/240 (70%), Positives = 189/240 (78%), Gaps = 16/240 (6%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQ----------------GFQXXXXXXXXXXXXXXXXXXX 134
AEL+D+VLDVVRKE ENCDCLQ GFQ
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLIS 169
Query: 135 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYR 314
KIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+R
Sbjct: 170 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 229
Query: 315 TLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 494
TLK+ NP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPL
Sbjct: 230 TLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 289
Query: 495 TSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TSRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQM+++
Sbjct: 290 TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINV 349
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 341 bits (839), Expect = 3e-94
Identities = 167/245 (68%), Positives = 188/245 (76%), Gaps = 21/245 (8%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQG---------------------FQXXXXXXXXXXXXXX 119
AEL+D+VLDVVRKE ENCDCLQG FQ
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGMG 169
Query: 120 XXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALY 299
KIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALY
Sbjct: 170 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALY 229
Query: 300 DICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMP 479
DIC+RTLK+ P++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM
Sbjct: 230 DICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 289
Query: 480 GFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDE 659
GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDE
Sbjct: 290 GFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 349
Query: 660 QMLSI 674
QM+++
Sbjct: 350 QMINV 354
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 198 bits (483), Expect = 3e-51
Identities = 91/223 (40%), Positives = 136/223 (60%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD LD VRK +NC LQGF ++ +Y + +++
Sbjct: 113 EIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
PSP+VS VVEPYN+VLS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +TT LRF G +N D+ + N+VP+PR+HF + +AP+ S + L+VPE+T
Sbjct: 233 QIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
+F+ +MMA CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 293 NAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATI 335
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 195 bits (475), Expect = 3e-50
Identities = 91/223 (40%), Positives = 134/223 (60%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD LD +RK +NC LQGF ++ +Y + ++V
Sbjct: 113 EIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
PSP+VS +VVEPYN+VLS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVS 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ +MMA CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 293 NSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATI 335
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 195 bits (475), Expect = 3e-50
Identities = 91/223 (40%), Positives = 134/223 (60%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD LD +RK +NC LQGF ++ +Y + ++V
Sbjct: 113 EIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
PSP+VS +VVEPYN+VLS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVS 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ +MMA CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 293 NSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATI 335
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 173 bits (421), Expect = 1e-43
Identities = 89/244 (36%), Positives = 135/244 (55%), Gaps = 21/244 (8%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD LD +RK +NC LQGF ++ +Y + +++
Sbjct: 173 EVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIY 232
Query: 186 PSP---------------------KVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYD 302
PSP K+S VVEPYN+VLS H L+E+TD +DNEA+YD
Sbjct: 233 PSPQYFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYD 292
Query: 303 ICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 482
IC R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF +
Sbjct: 293 ICKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSS 352
Query: 483 FAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQ 662
+AP+ S + +VPE+T +F+ ++MA CDPRHG+Y+ ++RG + K+V+
Sbjct: 353 YAPIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAA 412
Query: 663 MLSI 674
+ SI
Sbjct: 413 VHSI 416
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 138 bits (335), Expect = 3e-33
Identities = 74/234 (31%), Positives = 124/234 (52%), Gaps = 7/234 (2%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
++VD ++D++ +E + D L+GF + + Y +++ TYSV
Sbjct: 113 QVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVF 172
Query: 186 PSP-KVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
P+ + SD VV+PYN++L++ +L N D +DN AL I L + NPT+ N LV
Sbjct: 173 PNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLV 232
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSQQYRALTVPE 539
S MS TT LR+PG +N DL L +++P PR HF M G+ PLT R R TV +
Sbjct: 233 STVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLD 292
Query: 540 LTQQMFDAKNMMAACDPRH-----GRYLTVAAIFRGRMSMKEVDEQMLSIPKQE 686
+ +++ KN+M + R+ +Y+++ I +G + +V E + I +++
Sbjct: 293 VMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERK 346
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = -1
Query: 508 LPRDVSGAKPGMKKCRRGKGTMLTASLRRSAFSCPGNRRHVVTPDMVSDTRWFRSPYVGF 329
LP D SG G ++ G+G T+ L R + PG RR P V +R R G
Sbjct: 750 LPSDRSGR--GERRGWEGRGGAATSFLWRRPVAEPGRRRRSPPPSPVGVSRGRRGMRKGC 807
Query: 328 GTLR 317
G R
Sbjct: 808 GEKR 811
>03_02_0310 + 7315185-7316820,7318332-7318879
Length = 727
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 227 RSSLHPSTSREYRRNLLHRQ*GPLRYLLQDSQGTEPNVRRPEPPGVAD-HVRRDDVPAVP 403
R LH S + R+++ + +LQD + R G+ D H +RD++ ++
Sbjct: 263 RGGLHASRPDKILRDIVSDSVTAMAQVLQDFPSERLELLREAVRGMIDSHEKRDELASLQ 322
Query: 404 RTAERR 421
R ERR
Sbjct: 323 RKLERR 328
>07_01_1194 - 11325882-11326337,11327152-11327262
Length = 188
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2
Query: 81 SVGNPGGNRSSHTPCGLHQGRRR 13
+VG PGG RSS G HQ RRR
Sbjct: 94 TVGTPGGRRSSRG--GSHQARRR 114
>04_04_0504 + 25718364-25718700,25718993-25719102,25719230-25719331
Length = 182
Score = 28.3 bits (60), Expect = 6.2
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = -3
Query: 464 QTREGHHVDRQLAQVGVQLSGE--PQARRHAGHGQRHQVVQVA--VRWVRYLESPVADIV 297
Q E H + GV+ + PQ RRHA RH +VQV R++ L P+ D+V
Sbjct: 74 QPEEAHGGRAAVGGRGVRRRSQAVPQRRRHA--RLRHALVQVQAYARYLSLLGLPLFDLV 131
Query: 296 KG-LIVYAVSFVCIL 255
++V A +C L
Sbjct: 132 HNEVVVLAYIAICRL 146
>04_01_0500 -
6540769-6541482,6541819-6541877,6541965-6542064,
6542113-6542322,6542507-6542765,6544022-6544215
Length = 511
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -1
Query: 505 PRDVSGAKPGMKKCRRGKGT--MLTASLRRSA 416
P D + P +KKC++ KGT ++T + RRSA
Sbjct: 402 PPDNISSIPSLKKCKKSKGTNVVITDTDRRSA 433
>06_03_0244 + 18637406-18637511,18637576-18638123
Length = 217
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 341 RRPEPPGVADH-VRRDDVPAVPRTAERR-PAQAGGQHG 448
RRP PP ADH A R + RR P GG +G
Sbjct: 83 RRPSPPAAADHRCLPPPTTAAQRLSPRRGPRADGGMYG 120
>02_02_0462 + 10544939-10545130,10545520-10545609
Length = 93
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -2
Query: 414 SAVRGTAGTSSRRTWSATPG-GSGRRTLGSVP*ESCSRYRKGPHCLC 277
S RG SRR G G GR TL + + ++ +GPHC C
Sbjct: 21 SGDRGGWEEESRRCEERQLGVGGGRETLKILDGDFYTKLTEGPHCKC 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,606,138
Number of Sequences: 37544
Number of extensions: 358430
Number of successful extensions: 1293
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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