Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1269
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 407 e-114
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 404 e-113
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 398 e-111
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 280 9e-76
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 227 9e-60
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 5e-47
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 184 5e-47
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 8e-47
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 183 1e-46
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 183 1e-46
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 182 2e-46
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 182 2e-46
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 181 4e-46
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 1e-45
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 6e-42
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 163 2e-40
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 142 2e-34
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 130 1e-30
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 129 2e-30
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 129 2e-30
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 110 9e-25
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 7e-24
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 77 2e-14
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 69 4e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 66 3e-11
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 38 0.010
SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2) 31 0.90
SB_41641| Best HMM Match : PT (HMM E-Value=3.1) 31 0.90
SB_58810| Best HMM Match : DUF1613 (HMM E-Value=1.8) 30 1.6
SB_37781| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_14142| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9) 29 3.6
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 29 4.8
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 29 4.8
SB_12291| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-09) 29 4.8
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_4149| Best HMM Match : VWA (HMM E-Value=0) 28 6.4
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 28 8.4
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 28 8.4
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 407 bits (1001), Expect = e-114
Identities = 191/224 (85%), Positives = 200/224 (89%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIMNT+SV
Sbjct: 110 AELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
VPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNEALYDIC+RTLK+ PTYGDLNHLV
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL
Sbjct: 230 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQML++
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNV 333
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 404 bits (995), Expect = e-113
Identities = 188/224 (83%), Positives = 200/224 (89%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE E+CDC+QGFQ KIREEYPDRIMNT+S+
Sbjct: 110 AELMDSVLDVVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSI 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
VPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNEALYDIC+RTLK+ PTYGDLNHLV
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL
Sbjct: 230 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQML++
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNV 333
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 398 bits (979), Expect = e-111
Identities = 187/224 (83%), Positives = 198/224 (88%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AELVD+VLDVVRKE E+CDC+QGFQ KIREEYPDRIMNT+SV
Sbjct: 55 AELVDSVLDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSV 114
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
VPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNEALYDIC+RTLK+ PTYGDLNHLV
Sbjct: 115 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 174
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL FFMPGFAPLTSRGSQQYRALTVPEL
Sbjct: 175 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRGSQQYRALTVPEL 234
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQMFDAKNMMAACDP HGRYLTVAA+FRGRMSMKE+DEQML++
Sbjct: 235 TQQMFDAKNMMAACDPLHGRYLTVAAMFRGRMSMKELDEQMLNV 278
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 280 bits (686), Expect = 9e-76
Identities = 136/235 (57%), Positives = 167/235 (71%), Gaps = 24/235 (10%)
Frame = +3
Query: 33 VRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 212
+RKE E+CD +QGFQ ++EEYPDRI+++ SV PSP+VS+ V
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIV 60
Query: 213 VEPYNAVLSIHQLVENTDET------------------------YCIDNEALYDICYRTL 320
VEPYNA LS+HQL+E TDE +CIDNEALYDICY+TL
Sbjct: 61 VEPYNAALSVHQLLETTDEVSEIVVEPYNAALSVHQLLETTDEVFCIDNEALYDICYKTL 120
Query: 321 KVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 500
K+ TY DLNH++S TMSG+TTCLRFPGQLNADLRKLAVNM+P+PRLHFFMPGFAPLTS
Sbjct: 121 KLNTTTYSDLNHIISNTMSGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTS 180
Query: 501 RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM 665
R YRALTV +LTQ +FD KN++ AC+P+ G+YLT AA++RG MSMKEV++QM
Sbjct: 181 RECVSYRALTVADLTQAIFDNKNLLIACNPKRGKYLTYAAMYRGLMSMKEVEDQM 235
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 227 bits (554), Expect = 9e-60
Identities = 106/136 (77%), Positives = 112/136 (82%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIMNT+SV
Sbjct: 323 AELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSV 382
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
VPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNEALYDIC+RTLK+ PTYGDLNHLV
Sbjct: 383 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 442
Query: 363 SLTMSGVTTCLRFPGQ 410
S TMSGVTTCLRFPGQ
Sbjct: 443 SATMSGVTTCLRFPGQ 458
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 184 bits (449), Expect = 5e-47
Identities = 83/223 (37%), Positives = 128/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E +D VLD +RK + C LQGF ++ +Y + +++
Sbjct: 484 EQIDIVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIY 543
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P +S VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+S
Sbjct: 544 PAPHISSAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIS 603
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF M +AP+ S + LTV ++T
Sbjct: 604 QLVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKAYHEQLTVADIT 663
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 664 NSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATI 706
Score = 153 bits (372), Expect = 1e-37
Identities = 70/190 (36%), Positives = 108/190 (56%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D VLD +RK + C LQGF ++ +Y + +++
Sbjct: 917 EMIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIY 976
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 977 PAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 1036
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV E+T
Sbjct: 1037 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 1096
Query: 546 QQMFDAKNMM 575
F+ N M
Sbjct: 1097 NACFEPANQM 1106
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 184 bits (449), Expect = 5e-47
Identities = 84/223 (37%), Positives = 129/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD VLD +RK + C LQGF ++ +Y + +++
Sbjct: 546 EIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIY 605
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 606 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 665
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV E+T
Sbjct: 666 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 725
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 726 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 768
Score = 183 bits (445), Expect = 1e-46
Identities = 83/223 (37%), Positives = 129/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD VLD +RK + C LQGF ++ +Y + +++
Sbjct: 113 EIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 293 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 335
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 184 bits (447), Expect = 8e-47
Identities = 83/223 (37%), Positives = 129/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D VLD +RK + C LQGF ++ +Y + +++
Sbjct: 113 EMIDTVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S VVEPYN+VL+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 173 PAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV E+T
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 293 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 335
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 183 bits (446), Expect = 1e-46
Identities = 83/223 (37%), Positives = 129/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D VLD +RK + C LQGF ++ +Y + +++
Sbjct: 698 ELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIY 757
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 758 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 817
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 818 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 877
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 878 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 920
Score = 182 bits (442), Expect = 3e-46
Identities = 82/223 (36%), Positives = 129/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD VLD +RK + C LQGF ++ +Y + +++
Sbjct: 177 EIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIY 236
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 237 PAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMG 296
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 297 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 356
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 357 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 399
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 183 bits (445), Expect = 1e-46
Identities = 82/223 (36%), Positives = 129/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D VLD +RK + C LQGF ++ +Y + +++
Sbjct: 112 EIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIY 171
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 172 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 231
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV ++T
Sbjct: 232 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADIT 291
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 292 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 334
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 182 bits (443), Expect = 2e-46
Identities = 82/223 (36%), Positives = 129/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D VLD +RK + C LQGF ++ +Y + +++
Sbjct: 50 ELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIY 109
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 110 PAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMG 169
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 170 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 229
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 230 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 272
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 182 bits (443), Expect = 2e-46
Identities = 82/223 (36%), Positives = 129/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
+L++ VLD +RK + C LQGF ++ +Y + +++
Sbjct: 98 QLIEIVLDRLRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIY 157
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 158 PAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 217
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV E+T
Sbjct: 218 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 277
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ +FRG + K+V+ + +I
Sbjct: 278 TSCFEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATI 320
Score = 167 bits (407), Expect = 6e-42
Identities = 79/221 (35%), Positives = 124/221 (56%)
Frame = +3
Query: 12 VDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 191
+D VLD +RK + C LQGF ++ +Y + +++ P+
Sbjct: 533 IDNVLDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPA 592
Query: 192 PKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLT 371
P++S VVEPYN+VL+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 593 PQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIDCV 652
Query: 372 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 551
+ + LR+ LN DL + N+VP+PR+HF M +AP+ S + +TV +LT
Sbjct: 653 LHHCLSTLRWI--LNVDLMEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNA 710
Query: 552 MFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ +FRG + K+V+ + +I
Sbjct: 711 CFEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATI 751
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 182 bits (443), Expect = 2e-46
Identities = 83/223 (37%), Positives = 127/223 (56%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E +D LD +RK + C LQGF ++ +Y + ++V
Sbjct: 78 EHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVY 137
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S VVEPYN++LS H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 138 PAPQISTAVVEPYNSILSTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 197
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF M +AP+ S + +TV +LT
Sbjct: 198 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLT 257
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 258 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 300
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/223 (36%), Positives = 129/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D VLD +RK + C LQGF ++ +Y + +++
Sbjct: 38 ELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIY 97
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 98 PAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMG 157
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 158 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 217
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 218 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 260
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 182 bits (443), Expect = 2e-46
Identities = 85/230 (36%), Positives = 131/230 (56%), Gaps = 1/230 (0%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E +D LD +RK + C LQGF ++ +Y + ++V
Sbjct: 38 EHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVY 97
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 98 PAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 157
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV E+T
Sbjct: 158 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 217
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI-PKQEQQ 692
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I PK+ Q
Sbjct: 218 NSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIRPKRTFQ 267
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 181 bits (441), Expect = 4e-46
Identities = 81/223 (36%), Positives = 128/223 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D VLD RK + C LQGF ++ +Y + +++
Sbjct: 113 EIIDLVLDRCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S VVEPYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 173 PAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLIG 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 293 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSSIATI 335
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 180 bits (438), Expect = 1e-45
Identities = 81/217 (37%), Positives = 125/217 (57%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+V+ V+D +RK + C LQGF + +Y + ++V
Sbjct: 1024 EMVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVY 1083
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P +S VVEPYN+VL+ H +E++D T+ +DNEA+YD+C R L V P Y +LN L+
Sbjct: 1084 PAPHISTAVVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDLCRRNLDVERPGYANLNRLIG 1143
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T+ LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV ++T
Sbjct: 1144 QIVSSITSSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISPEKAYHEQLTVAQIT 1203
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVD 656
FD N M CDPRHG+Y+ ++RG + + ++D
Sbjct: 1204 NMCFDPNNQMVKCDPRHGKYMACCMLYRGDVFIYQLD 1240
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 167 bits (407), Expect = 6e-42
Identities = 75/212 (35%), Positives = 119/212 (56%)
Frame = +3
Query: 39 KECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVE 218
K + C LQGF ++ +Y R ++V P+P++S VVE
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
Query: 219 PYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLR 398
PYN++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S VT LR
Sbjct: 315 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSVTASLR 374
Query: 399 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 578
F G LN DL + N+VP+PR+HF + +AP+ + ++V E+T F+ N M
Sbjct: 375 FDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIGADKAYHENMSVAEITSACFEPSNQMV 434
Query: 579 ACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
CDPR+G+Y+ ++RG + K+V+ + +I
Sbjct: 435 KCDPRYGKYMACCLLYRGDVVPKDVNSAIAAI 466
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 163 bits (395), Expect = 2e-40
Identities = 76/136 (55%), Positives = 93/136 (68%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+ +D +RK ENCD +QGFQ KIREEYPDR+++++ V
Sbjct: 18 AELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLSKIREEYPDRLVSSFCV 77
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
+PSP VS+TV EPYNA LS HQLV+ D CIDNEALY+ICY LK PTY +LN L+
Sbjct: 78 LPSPLVSETVTEPYNATLSFHQLVDVADAAICIDNEALYNICYNVLKRETPTYSELNSLI 137
Query: 363 SLTMSGVTTCLRFPGQ 410
+ TMSGVTT LRFPGQ
Sbjct: 138 ATTMSGVTTSLRFPGQ 153
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 142 bits (345), Expect = 2e-34
Identities = 67/178 (37%), Positives = 101/178 (56%)
Frame = +3
Query: 12 VDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 191
VD VLD +RK + C LQGF ++ +Y + ++V P+
Sbjct: 105 VDQVLDRLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPA 164
Query: 192 PKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLT 371
P ++ VVEPYN++L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+
Sbjct: 165 PHIASAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQI 224
Query: 372 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S VT LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV E+T
Sbjct: 225 VSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 282
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 130 bits (313), Expect = 1e-30
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +3
Query: 444 MVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAI 623
MVPFPRLHFFMPGFAPL SR +QQY+ ++V ELTQQMFDA+NMM ACDPRHGRYLTVAAI
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLTVAAI 60
Query: 624 FRGRMSMKE 650
FRG+MSM+E
Sbjct: 61 FRGKMSMRE 69
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 129 bits (312), Expect = 2e-30
Identities = 55/132 (41%), Positives = 82/132 (62%)
Frame = +3
Query: 279 IDNEALYDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 458
+DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL + N+VP+P
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 61
Query: 459 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 638
R+HF + +AP+ S + LTV ++T F+ N M CDPRHG+Y+ ++RG +
Sbjct: 62 RIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDV 121
Query: 639 SMKEVDEQMLSI 674
K+V+ + +I
Sbjct: 122 VPKDVNAAIATI 133
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 129 bits (311), Expect = 2e-30
Identities = 55/132 (41%), Positives = 82/132 (62%)
Frame = +3
Query: 279 IDNEALYDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 458
+DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL + N+VP+P
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 61
Query: 459 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 638
R+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y+ ++RG +
Sbjct: 62 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 121
Query: 639 SMKEVDEQMLSI 674
K+V+ + +I
Sbjct: 122 VPKDVNAAIATI 133
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 110 bits (265), Expect = 9e-25
Identities = 49/137 (35%), Positives = 77/137 (56%)
Frame = +3
Query: 48 ENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 227
+ C LQGF ++ +Y + +++ P+P++S VVEPYN
Sbjct: 2 DQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 61
Query: 228 AVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPG 407
++L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G
Sbjct: 62 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDG 121
Query: 408 QLNADLRKLAVNMVPFP 458
LN DL + N+VP+P
Sbjct: 122 ALNVDLTEFQTNLVPYP 138
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 107 bits (258), Expect = 7e-24
Identities = 48/104 (46%), Positives = 69/104 (66%)
Frame = +3
Query: 189 SPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSL 368
S +SD VV+PYN++L++ +L +N D +DN AL I L++PNPT+ +N LVS
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNADCVVVLDNTALNRIAADRLRIPNPTFSQVNQLVST 270
Query: 369 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 500
M+ TT LR+PG +N DL L +++P PRLHF M G+ PLT+
Sbjct: 271 IMATSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTT 314
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D + DV+RKE ENCDC+QG Q KIREEYPDRI++ +SV
Sbjct: 66 AELIDNIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSV 125
Query: 183 VPSPKV 200
VPSPKV
Sbjct: 126 VPSPKV 131
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 68.9 bits (161), Expect = 4e-12
Identities = 29/102 (28%), Positives = 55/102 (53%)
Frame = +3
Query: 348 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 527
+N++V+ + +T+ RF G LN DL ++ +N+VPFP+LH+ + PL + +
Sbjct: 274 MNNIVANLILNMTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPLYALTDVKLPPR 333
Query: 528 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 653
+ ++ F + + DP+H YL A I RG + + ++
Sbjct: 334 RLDQMFTDAFSKDHQLIKADPKHNLYLACALILRGNVEVSDI 375
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +3
Query: 138 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDIC 308
+ ++YPD T +V PS D + PYN+VL++HQL E+ D I+N+AL DIC
Sbjct: 169 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQALVDIC 224
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Frame = +3
Query: 12 VDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 191
+D VLD+V++E E CD L GF +R+ YP+ + V P
Sbjct: 121 IDKVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPNSFIVNNVVWPY 180
Query: 192 PKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLT 371
+ + +V+ YNA L++ QL +++D ++N+ L IC + L + + ++ D+N +VS
Sbjct: 181 -SMGEVIVQNYNATLTLAQLYKSSDAIIIVENDKLQKICSKLLNLKHISFRDINKVVSHK 239
Query: 372 MSGVTTCLRF--PGQLNADLRK 431
+ + ++ GQ +L K
Sbjct: 240 LGSMLQPMKLFRAGQSETELGK 261
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 138 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 290
+ ++YPD T +V PS D + PYN+VL++HQL E+ D I+N+
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQ 70
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 37.5 bits (83), Expect = 0.010
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 9 LVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 188
L+ +D +RKE E CD G + + YP + + SV
Sbjct: 96 LLHMTMDAMRKEVERCDSFAGTIVMHSLTGGTGSGLGARLVETLSDAYP--LAHVMSVAV 153
Query: 189 SPKVS-DTVVEPYNAVLSIHQLVENTDETYCIDN-EALYDICYRTLKV 326
SP VS ++ ++ YN++LS+ L N D N + L + + +K+
Sbjct: 154 SPHVSGESPLQHYNSLLSLAALQRNADGILLFHNDDVLRQVMLQRVKI 201
>SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2)
Length = 341
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 477 PGFAPLTSRGSQQYRALTVPELTQQMFDAK---NMMAACDPRHGRYLTVAA 620
PG+ L++ GS Q T P +T +M+ K N +AA P R+ T+AA
Sbjct: 118 PGYLSLSAFGSPQVSRSTTPGITYEMYGVKERGNSLAA-RPATSRHATLAA 167
>SB_41641| Best HMM Match : PT (HMM E-Value=3.1)
Length = 873
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 326 TEPNVRRPEPPGVADHVRRDDVPAVPRTAERRPAQAGGQ 442
TEP R +P G A+ +R VP +RP GG+
Sbjct: 776 TEPTKRPQDPVGQAEPTKRPQVPVGKAEPTKRPQSRGGE 814
>SB_58810| Best HMM Match : DUF1613 (HMM E-Value=1.8)
Length = 989
Score = 30.3 bits (65), Expect = 1.6
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Frame = +2
Query: 179 SSPLAQSIRHRRRTIQR---SSLHPSTSREYR-RNLLHRQ*GPLRY--LLQDSQGTEPNV 340
S+P + S H R R S H TS + R R + R LQ +G +
Sbjct: 794 SAPSSSSFLHERTESPRPTWKSRHTDTSSKERWRRWAESRRCERRMPPALQPGRGADDAA 853
Query: 341 RRPEPPG-VADHVRRDDVPAVPRTAERRPAQAG 436
+ P G VA RR D+P + T RR QAG
Sbjct: 854 KEEGPLGDVASDCRRLDLPRLVETRPRRARQAG 886
>SB_37781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 255 ENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLR 428
E DE C+D + L+ + + ++P P+ L+ + LT V P L+ D+R
Sbjct: 156 EEDDEESCLDFQLLHQVLVKRKRLPQPS-NQLSQMPMLTSKPVQALFNIP-PLHRDIR 211
>SB_14142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 149 VPRQNHEHILSSPLAQSIRHRRRTIQRSSLHPSTSREYRRNLLHRQ 286
+ ++N +H ++++HR+R I + +L +RNLLHR+
Sbjct: 242 ISKRNLQHREGLISKRNLQHRQRLISKRNLQHREGMISKRNLLHRE 287
>SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9)
Length = 283
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 311 QDSQGTEPNVRRPEPPGVADHVRRDDVPAVPRTAERR-PAQA 433
QD Q T P + + + P A + ++D P+T++++ P QA
Sbjct: 136 QDKQATSPKISKQQAPRQASNKQQDKQATSPKTSKQQAPRQA 177
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +3
Query: 27 DVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVS 203
D +R E CD LQGFQ +R+EY + M T VP+ K +
Sbjct: 224 DGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPAHFKDT 282
Query: 204 D---TVVEPYNAVLSIHQLVENTD 266
D V N LS Q+ E+ D
Sbjct: 283 DQEHNVKRILNMALSFSQITEHCD 306
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +3
Query: 27 DVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVS 203
D +R E CD LQGFQ +R+EY + M T VP+ K +
Sbjct: 224 DGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPAHFKDT 282
Query: 204 D---TVVEPYNAVLSIHQLVENTD 266
D V N LS Q+ E+ D
Sbjct: 283 DQEHNVKRILNMALSFSQITEHCD 306
>SB_12291| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-09)
Length = 843
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -1
Query: 496 VSGAKPGMKKCRRGKGTMLTASLRRSAFSCPGNRRHVVTPDMVSDTRWFRS 344
+ G K +K C + T + +RS G RR+ PDM +W RS
Sbjct: 785 ICGIKSFLKMCISSLNKLWTGTRKRSEGKGDG-RRNQTQPDMKCTLKWIRS 834
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 134 KDP*RVPRQNHEHILSSPLAQSIR 205
+D RV R+N HI+S+PL Q IR
Sbjct: 245 EDRGRVYRRNRRHIISTPLDQPIR 268
>SB_4149| Best HMM Match : VWA (HMM E-Value=0)
Length = 1141
Score = 28.3 bits (60), Expect = 6.4
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Frame = +3
Query: 174 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVP--NPT--- 338
YS + SP+ + + + ++++ D+T D D+ RT K +P
Sbjct: 757 YSSIASPETRG--FRNFRSESELKEILDKMDKTN--DPVKRVDLALRTAKREFFSPKGGM 812
Query: 339 -YGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 449
+G +L+ LT S +T G +ADL++L VN+V
Sbjct: 813 RFGHPRYLIFLTSSPITAGHEDVGSASADLKELDVNIV 850
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 135 KIREEYPDRIMNTYSVVPSPKVS 203
K++E+YPD I++++ + P K S
Sbjct: 486 KLQEQYPDHILSSFELFPCEKAS 508
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 146 RVPRQNHEHILSSPLAQSIR 205
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 411 AVRGTAGTSSRRTWSATPGGSGRRTLG 331
A++GT G + TWS P SG + +G
Sbjct: 377 ALKGTVGPGNVGTWSGVPSQSGPQFMG 403
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 146 RVPRQNHEHILSSPLAQSIR 205
RV R+N HI+S+PL Q IR
Sbjct: 78 RVYRRNRRHIISTPLDQPIR 97
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 146 RVPRQNHEHILSSPLAQSIR 205
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,458,327
Number of Sequences: 59808
Number of extensions: 381839
Number of successful extensions: 1517
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1486
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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