Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1269
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 400 e-112
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 395 e-110
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 394 e-110
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 391 e-109
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 391 e-109
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 389 e-108
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 225 3e-59
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 225 3e-59
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 192 2e-49
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 190 6e-49
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 190 8e-49
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 190 8e-49
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 188 3e-48
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 186 1e-47
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 186 1e-47
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 186 1e-47
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 186 1e-47
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 185 2e-47
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 185 2e-47
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 184 5e-47
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 183 1e-46
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 180 1e-45
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 180 1e-45
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 168 3e-42
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 103 2e-22
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 103 2e-22
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 30 1.4
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ... 29 3.2
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage... 29 3.2
Z92830-13|CAI79168.1| 135|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical pr... 28 7.4
U28940-5|AAA68351.1| 156|Caenorhabditis elegans Hypothetical pr... 28 7.4
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 400 bits (986), Expect = e-112
Identities = 188/224 (83%), Positives = 199/224 (88%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AELVD VLDVVRKE E+CDCLQGFQ KIREEYPDRIM T+SV
Sbjct: 110 AELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
VPSPKVSDTVVEPYNA LS+HQLVENTDET+CIDNEALYDIC+RTLK+ PTYGDLNHLV
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLV 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S+TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYR+LTVPEL
Sbjct: 230 SMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQML++
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNV 333
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 395 bits (972), Expect = e-110
Identities = 184/224 (82%), Positives = 198/224 (88%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AELVD VLDV+RKE E CDCLQGFQ KIREEYPDRIM+++SV
Sbjct: 110 AELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
VPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNEALYDICYRTLK+ NPTYGDLNHLV
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLV 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G+Q YRALTV EL
Sbjct: 230 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQML++
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNV 333
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 394 bits (971), Expect = e-110
Identities = 184/224 (82%), Positives = 198/224 (88%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AELVD VLDV+RKE E CDCLQGFQ KIREE+PDRIM+++SV
Sbjct: 110 AELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
VPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNEALYDICYRTLK+ NPTYGDLNHLV
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLV 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G+Q YRALTV EL
Sbjct: 230 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQMLS+
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSV 333
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 391 bits (962), Expect = e-109
Identities = 185/224 (82%), Positives = 194/224 (86%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AELVD VLDVVRKE E+ DCLQGFQ KIREEYPDRIMNT+SV
Sbjct: 110 AELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
VPSPKVSDTVVEPYNA LS+HQLVENTD T+CIDNEALYDIC+RTLK+ PTYGDLNHLV
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLV 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR +QQYRA+TVPEL
Sbjct: 230 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQ FDAKNMMAACDPRHGRYLT AAIFRGRMSMKEVDEQML+I
Sbjct: 290 TQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNI 333
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 391 bits (962), Expect = e-109
Identities = 185/224 (82%), Positives = 194/224 (86%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AELVD VLDVVRKE E+ DCLQGFQ KIREEYPDRIMNT+SV
Sbjct: 110 AELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
VPSPKVSDTVVEPYNA LS+HQLVENTD T+CIDNEALYDIC+RTLK+ PTYGDLNHLV
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLV 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR +QQYRA+TVPEL
Sbjct: 230 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQ FDAKNMMAACDPRHGRYLT AAIFRGRMSMKEVDEQML+I
Sbjct: 290 TQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNI 333
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 389 bits (957), Expect = e-108
Identities = 180/224 (80%), Positives = 198/224 (88%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AELVD VLDVVRKE E CDCLQGFQ KIREEYPDRIM+++SV
Sbjct: 110 AELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
VPSPKVSDTVVEPYNA LS+HQLVENTDET+CIDNEALYDIC+RTLK+ NPTYGDLNHLV
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLV 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S+TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G+Q YRALTV EL
Sbjct: 230 SVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVD+QM+++
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNV 333
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 225 bits (549), Expect = 3e-59
Identities = 110/229 (48%), Positives = 152/229 (66%), Gaps = 1/229 (0%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AE+VD VL V+R+E E D L+GFQ K+REEY D+ ++T S+
Sbjct: 110 AEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSI 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPN-PTYGDLNHL 359
+PS KVSDTVVEPYNA+LS+ L++N DE +CIDNEA++DIC LK+ N TYGDLNHL
Sbjct: 170 IPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHL 229
Query: 360 VSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 539
SL +SG+TT RF G L D+RKL N PRLHFFM FAP+ +G +A ++ +
Sbjct: 230 ASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISD 287
Query: 540 LTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIPKQE 686
LTQQ+ DAKN+M C+ G++L+ A I+RG+ + K+ EQ++S+ ++
Sbjct: 288 LTQQVLDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENED 335
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 225 bits (549), Expect = 3e-59
Identities = 110/229 (48%), Positives = 152/229 (66%), Gaps = 1/229 (0%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AE+VD VL V+R+E E D L+GFQ K+REEY D+ ++T S+
Sbjct: 110 AEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSI 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPN-PTYGDLNHL 359
+PS KVSDTVVEPYNA+LS+ L++N DE +CIDNEA++DIC LK+ N TYGDLNHL
Sbjct: 170 IPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHL 229
Query: 360 VSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 539
SL +SG+TT RF G L D+RKL N PRLHFFM FAP+ +G +A ++ +
Sbjct: 230 ASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISD 287
Query: 540 LTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIPKQE 686
LTQQ+ DAKN+M C+ G++L+ A I+RG+ + K+ EQ++S+ ++
Sbjct: 288 LTQQVLDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENED 335
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 192 bits (468), Expect = 2e-49
Identities = 87/226 (38%), Positives = 136/226 (60%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D LD +R+ NC+ LQGF ++ EY + +S+
Sbjct: 110 EIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIY 169
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S +VVEPYN++L+ H +E++D ++ +DNEA+YDIC R L+V PTY +LN ++S
Sbjct: 170 PAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIIS 229
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + + PL S S + L+V E+T
Sbjct: 230 QVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLIS--SAHHEFLSVDEIT 287
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIPKQ 683
+ F+A N M CDP+HG+Y+ V ++RG + K+V + SI Q
Sbjct: 288 KSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQ 333
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 190 bits (464), Expect = 6e-49
Identities = 85/223 (38%), Positives = 132/223 (59%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D VLD +R+ +NC LQGF ++ +Y + +S+
Sbjct: 111 ELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 170
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D + +DNEA+YDIC R L V P+Y +LN ++S
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIIS 230
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 231 QVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDIT 290
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ V ++RG + K+V+ + +I
Sbjct: 291 NSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAI 333
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 190 bits (463), Expect = 8e-49
Identities = 85/223 (38%), Positives = 132/223 (59%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D VLD +R+ +NC LQGF ++ +Y + +S+
Sbjct: 111 ELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 170
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D + +DNEA+YDIC R L V P+Y +LN ++S
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIIS 230
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 231 QVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDIT 290
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ V ++RG + K+V+ + +I
Sbjct: 291 NSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAI 333
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 190 bits (463), Expect = 8e-49
Identities = 85/223 (38%), Positives = 132/223 (59%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D VLD +R+ +NC LQGF ++ +Y + +S+
Sbjct: 111 ELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 170
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D + +DNEA+YDIC R L V P+Y +LN ++S
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIIS 230
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 231 QVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDIT 290
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ V ++RG + K+V+ + +I
Sbjct: 291 NSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAI 333
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 188 bits (459), Expect = 3e-48
Identities = 84/223 (37%), Positives = 131/223 (58%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D VLD +R+ +NC LQGF ++ +Y + +S+
Sbjct: 111 ELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 170
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+V VVEPYN++L+ H +E++D + +DNEA+YDIC R L V P+Y +LN ++S
Sbjct: 171 PAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIIS 230
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 231 QVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDIT 290
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ V ++RG + K+V+ + +I
Sbjct: 291 NSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAI 333
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 186 bits (453), Expect = 1e-47
Identities = 83/223 (37%), Positives = 131/223 (58%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D LD +R+ +NC LQGF ++ +Y + +S+
Sbjct: 113 EIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIG 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ V +FRG + K+V+ + +I
Sbjct: 293 NMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATI 335
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 186 bits (453), Expect = 1e-47
Identities = 83/223 (37%), Positives = 131/223 (58%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D LD +R+ +NC LQGF ++ +Y + +S+
Sbjct: 112 EIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIY 171
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+
Sbjct: 172 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIG 231
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T
Sbjct: 232 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEIT 291
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ V +FRG + K+V+ + +I
Sbjct: 292 NMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATI 334
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 186 bits (453), Expect = 1e-47
Identities = 83/223 (37%), Positives = 131/223 (58%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D LD +R+ +NC LQGF ++ +Y + +S+
Sbjct: 113 EIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIG 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ V +FRG + K+V+ + +I
Sbjct: 293 NMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATI 335
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 186 bits (453), Expect = 1e-47
Identities = 83/223 (37%), Positives = 131/223 (58%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D LD +R+ +NC LQGF ++ +Y + +S+
Sbjct: 113 EIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIG 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPRHG+Y+ V +FRG + K+V+ + +I
Sbjct: 293 NMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATI 335
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 185 bits (451), Expect = 2e-47
Identities = 83/223 (37%), Positives = 131/223 (58%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D LD +R+ +NC LQGF ++ +Y + +S+
Sbjct: 111 ELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 170
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D + +DNEA+YDIC R L V P+Y +LN ++S
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIIS 230
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 231 QVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDIT 290
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPR+G+Y+ V ++RG + K+V+ + +I
Sbjct: 291 NSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAI 333
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 185 bits (451), Expect = 2e-47
Identities = 83/223 (37%), Positives = 131/223 (58%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D LD +R+ +NC LQGF ++ +Y + +S+
Sbjct: 111 ELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 170
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS VVEPYN++L+ H +E++D + +DNEA+YDIC R L V P+Y +LN ++S
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIIS 230
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 231 QVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDIT 290
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDPR+G+Y+ V ++RG + K+V+ + +I
Sbjct: 291 NSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAI 333
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 184 bits (448), Expect = 5e-47
Identities = 83/223 (37%), Positives = 133/223 (59%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D VLD +RK+ ENC+ LQGF ++ E+ + +SV
Sbjct: 116 ELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVY 175
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS +VVEPYN++L+ H +E +D ++ +DNEA+YD+C + L V P+Y +LN L++
Sbjct: 176 PAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIA 235
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V ++T
Sbjct: 236 QVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDIT 295
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ N M CDP G+Y+ V ++RG + K+V+ + S+
Sbjct: 296 HMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSV 338
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 183 bits (445), Expect = 1e-46
Identities = 83/223 (37%), Positives = 132/223 (59%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D V+D VR+ ENC LQGF ++ +Y + + +
Sbjct: 118 EIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIY 177
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS ++VEPYN++L+ H +E++D ++ +DNEA+YDIC R L + PTY +LN L++
Sbjct: 178 PAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIA 237
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S VT LRF G LN DL + N+VP+PR+HF + +AP+ S + +TV E+T
Sbjct: 238 QVISSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEIT 297
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
QQ F+ M CDPR G+Y+ ++RG + K+V+ + S+
Sbjct: 298 QQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASV 340
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 180 bits (437), Expect = 1e-45
Identities = 81/223 (36%), Positives = 131/223 (58%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D V+D V++ ENC+ LQGF ++ EY + +++
Sbjct: 119 EMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIY 178
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS ++VEPYN++L H +E++D T+ +DNEA+YDIC R L + PTY +LN LV+
Sbjct: 179 PAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVA 238
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +APL S + TV ++T
Sbjct: 239 QIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMT 298
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ M CDPR G+Y+ V ++RG + K+++ + ++
Sbjct: 299 HACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAV 341
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 180 bits (437), Expect = 1e-45
Identities = 81/223 (36%), Positives = 131/223 (58%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E++D V+D V++ ENC+ LQGF ++ EY + +++
Sbjct: 91 EMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIY 150
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P+VS ++VEPYN++L H +E++D T+ +DNEA+YDIC R L + PTY +LN LV+
Sbjct: 151 PAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVA 210
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +APL S + TV ++T
Sbjct: 211 QIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMT 270
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ M CDPR G+Y+ V ++RG + K+++ + ++
Sbjct: 271 HACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAV 313
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 168 bits (409), Expect = 3e-42
Identities = 78/223 (34%), Positives = 130/223 (58%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
EL+D V+D VR+ E C LQGF ++ +Y + +S+
Sbjct: 113 ELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
P+P++S ++VEPYN++L+ H +E++D ++ +DNEA+Y+I L V +PTY LN L++
Sbjct: 173 PAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLA 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
F+ + M CDPR+G+Y+ ++RG + KE++ + +I
Sbjct: 293 NVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTI 335
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 103 bits (246), Expect = 2e-22
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+ + ++D++ +E EN + L G ++RE +P +++ TYSV
Sbjct: 115 EVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVF 174
Query: 186 PSPKVS-DTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
+ S D VV PYN VLS+ +L+EN D +DN AL+ + K PT+ +N LV
Sbjct: 175 ANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLV 234
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
+ MS T RF + +R L ++ PFP +HF +P+ R +V ++
Sbjct: 235 ARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADV 292
Query: 543 TQQMFDAKNMMAACDPR 593
T+ + +MM + R
Sbjct: 293 TRFLLKPTSMMVSTASR 309
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 103 bits (246), Expect = 2e-22
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+ + ++D++ +E EN + L G ++RE +P +++ TYSV
Sbjct: 115 EVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVF 174
Query: 186 PSPKVS-DTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
+ S D VV PYN VLS+ +L+EN D +DN AL+ + K PT+ +N LV
Sbjct: 175 ANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLV 234
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
+ MS T RF + +R L ++ PFP +HF +P+ R +V ++
Sbjct: 235 ARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADV 292
Query: 543 TQQMFDAKNMMAACDPR 593
T+ + +MM + R
Sbjct: 293 TRFLLKPTSMMVSTASR 309
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 432 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM-AACDPRHGRYL 608
L M PF LH +P + RG ++LT E+ +Q+ NM+ + + +G+ +
Sbjct: 6 LTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLT--EMHRQLLTKTNMIDSVIETYNGKPI 63
Query: 609 TVAAIFRGRMSMKEVDE 659
A + + +KE DE
Sbjct: 64 PAAIEAKKKQIIKERDE 80
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 447 VPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 599
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 447 VPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 599
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
protein Y39A1B.3 protein.
Length = 1499
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 341 RRPEPPGVADH--VRRDDVPAVPRTAERRPAQ 430
RR PP +D DD PA PR+A RR A+
Sbjct: 1450 RRAPPPAQSDEDDSDSDDAPAAPRSAARRKAK 1481
>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
compensation protein protein.
Length = 1455
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 341 RRPEPPGVADH--VRRDDVPAVPRTAERRPAQ 430
RR PP +D DD PA PR+A RR A+
Sbjct: 1406 RRAPPPAQSDEDDSDSDDAPAAPRSAARRKAK 1437
>Z92830-13|CAI79168.1| 135|Caenorhabditis elegans Hypothetical
protein F11A5.16 protein.
Length = 135
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 585 DPRHGRYLTVAAIFRGRMSMKEVDEQMLSIPKQEQQL 695
DP++ Y +G + +K + E+ L PKQ+++L
Sbjct: 91 DPKYSEYTKKNVDSKGVVKLKAISEKYLEDPKQDRRL 127
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/76 (26%), Positives = 26/76 (34%)
Frame = +2
Query: 194 QSIRHRRRTIQRSSLHPSTSREYRRNLLHRQ*GPLRYLLQDSQGTEPNVRRPEPPGVADH 373
Q R R + SS S + HR P R Q+ PEPP +
Sbjct: 279 QYARERSSSTTTSSRRRQVSPDRSEQRRHRDEPPPRRAPQEQPSRRRGASPPEPPRRQEG 338
Query: 374 VRRDDVPAVPRTAERR 421
RR + P R + R
Sbjct: 339 ARRSEEPERRRLFDER 354
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/76 (26%), Positives = 26/76 (34%)
Frame = +2
Query: 194 QSIRHRRRTIQRSSLHPSTSREYRRNLLHRQ*GPLRYLLQDSQGTEPNVRRPEPPGVADH 373
Q R R + SS S + HR P R Q+ PEPP +
Sbjct: 387 QYARERSSSTTTSSRRRQVSPDRSEQRRHRDEPPPRRAPQEQPSRRRGASPPEPPRRQEG 446
Query: 374 VRRDDVPAVPRTAERR 421
RR + P R + R
Sbjct: 447 ARRSEEPERRRLFDER 462
>Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical
protein C50B6.3 protein.
Length = 526
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/71 (25%), Positives = 29/71 (40%)
Frame = +3
Query: 135 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYR 314
K REE R S +V + V E Y+ + I++L N ++ L Y+
Sbjct: 419 KFREEVQRRYAEGSSASDQERVRNMVYEAYDNIYHINRLSANEGPRILTSDQKLVMQQYK 478
Query: 315 TLKVPNPTYGD 347
T PT+ +
Sbjct: 479 TTFRQGPTFAE 489
>U28940-5|AAA68351.1| 156|Caenorhabditis elegans Hypothetical
protein T24H7.3 protein.
Length = 156
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 336 TYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 494
T+ + H + LT G +N D R+L ++ F LH + +PL
Sbjct: 79 TFENHTHCIELTQKGWRVASNRNDCMNGDFRQLDIHTKYFESLHTLLMDISPL 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,889,124
Number of Sequences: 27780
Number of extensions: 273812
Number of successful extensions: 952
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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