Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1269
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 363 e-101
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 362 e-100
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 362 e-100
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 361 e-100
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 360 e-100
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 360 e-100
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 358 2e-99
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 354 4e-98
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 354 4e-98
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 199 2e-51
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 198 4e-51
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 198 4e-51
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 193 1e-49
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 193 1e-49
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 193 1e-49
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 193 1e-49
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 135 3e-32
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 134 4e-32
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 36 0.034
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 36 0.034
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 32 0.42
At3g17670.1 68416.m02256 ferredoxin-related contains Pfam PF0051... 31 0.56
At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ b... 31 0.74
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 31 0.98
At3g14310.1 68416.m01810 pectinesterase family protein contains ... 31 0.98
At3g47190.1 68416.m05124 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 2.3
At5g55570.1 68418.m06927 expressed protein 29 3.9
At2g45490.1 68415.m05658 protein kinase, putative contains prote... 29 3.9
At4g24240.1 68417.m03479 WRKY family transcription factor contai... 28 5.2
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 28 6.9
At3g45780.1 68416.m04953 protein kinase / nonphototropic hypocot... 28 6.9
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 27 9.1
At2g45410.1 68415.m05649 LOB domain protein 19 / lateral organ b... 27 9.1
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 363 bits (893), Expect = e-101
Identities = 167/224 (74%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ NPT+GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQY AL+VPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+++
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNV 333
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 362 bits (890), Expect = e-100
Identities = 167/224 (74%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+++
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 362 bits (890), Expect = e-100
Identities = 167/224 (74%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+DAVLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+++
Sbjct: 290 TQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 361 bits (887), Expect = e-100
Identities = 167/224 (74%), Positives = 187/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYR LTVPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQML++
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 360 bits (886), Expect = e-100
Identities = 166/224 (74%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYR+LTVPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQML++
Sbjct: 290 TQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 360 bits (886), Expect = e-100
Identities = 166/224 (74%), Positives = 188/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYR+LTVPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQML++
Sbjct: 290 TQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 358 bits (881), Expect = 2e-99
Identities = 166/224 (74%), Positives = 187/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+D+VLDVVRKE EN DCLQGFQ KIREEYPDR+M T+SV
Sbjct: 110 AELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSV 169
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ NPT+GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLI 229
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQY AL+VPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPEL 289
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG++S KEVDEQM++I
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNI 333
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 354 bits (870), Expect = 4e-98
Identities = 165/224 (73%), Positives = 186/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+DAVLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 111 AELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 170
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+
Sbjct: 171 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLI 230
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQY +LTVPEL
Sbjct: 231 SATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPEL 290
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQ+L++
Sbjct: 291 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNV 334
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 354 bits (870), Expect = 4e-98
Identities = 166/224 (74%), Positives = 186/224 (83%)
Frame = +3
Query: 3 AELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 182
AEL+DAVLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV
Sbjct: 111 AELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSV 170
Query: 183 VPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLV 362
PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+
Sbjct: 171 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLI 230
Query: 363 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 542
S TMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQY +LTVPEL
Sbjct: 231 SATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPEL 290
Query: 543 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
TQQM+D+KNMM A DPRHGRYLT +AIFRG+MS KEVDEQ+L+I
Sbjct: 291 TQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNI 334
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 199 bits (485), Expect = 2e-51
Identities = 89/223 (39%), Positives = 136/223 (60%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD L+ +RK +NC LQGF ++ ++ + +++
Sbjct: 113 EIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
PSP+VS VVEPYN+VLS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLIS 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
T+S +TT LRF G +N D+ + N+VP+PR+HF + +AP+ S + +VPE+T
Sbjct: 233 QTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSI 674
+F+ NMMA CDPRHG+Y+ ++RG + K+V+ + +I
Sbjct: 293 TSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAI 335
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 198 bits (482), Expect = 4e-51
Identities = 90/217 (41%), Positives = 133/217 (61%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD LD VRK +NC LQGF ++ +Y + +++
Sbjct: 113 EIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
PSP+VS VVEPYN+VLS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +TT LRF G +N D+ + N+VP+PR+HF + +AP+ S + L+VPE+T
Sbjct: 233 QIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVD 656
+F+ +MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 293 NAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 198 bits (482), Expect = 4e-51
Identities = 90/217 (41%), Positives = 133/217 (61%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD LD VRK +NC LQGF ++ +Y + +++
Sbjct: 113 EIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
PSP+VS VVEPYN+VLS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +TT LRF G +N D+ + N+VP+PR+HF + +AP+ S + L+VPE+T
Sbjct: 233 QIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVD 656
+F+ +MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 293 NAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 193 bits (470), Expect = 1e-49
Identities = 90/217 (41%), Positives = 132/217 (60%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD LD +RK +NC LQGF ++ +Y + ++V
Sbjct: 113 EIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
PSP+VS +VVEPYN+VLS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVS 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVD 656
F+ +MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 193 bits (470), Expect = 1e-49
Identities = 90/217 (41%), Positives = 132/217 (60%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD LD +RK +NC LQGF ++ +Y + ++V
Sbjct: 113 EIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
PSP+VS +VVEPYN+VLS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVS 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVD 656
F+ +MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 193 bits (470), Expect = 1e-49
Identities = 90/217 (41%), Positives = 132/217 (60%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD LD +RK +NC LQGF ++ +Y + ++V
Sbjct: 113 EIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
PSP+VS +VVEPYN+VLS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVS 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVD 656
F+ +MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 193 bits (470), Expect = 1e-49
Identities = 90/217 (41%), Positives = 132/217 (60%)
Frame = +3
Query: 6 ELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVV 185
E+VD LD +RK +NC LQGF ++ +Y + ++V
Sbjct: 113 EIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVY 172
Query: 186 PSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVS 365
PSP+VS +VVEPYN+VLS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVS 232
Query: 366 LTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 545
+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 546 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVD 656
F+ +MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 135 bits (326), Expect = 3e-32
Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 7/231 (3%)
Frame = +3
Query: 15 DAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 194
+ ++D++ +E + D L+GF + + Y +++ TYSV P+
Sbjct: 116 EEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQ 175
Query: 195 -KVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLT 371
+ SD VV+PYN++L++ +L N D +DN AL I L + NPT+ N LVS
Sbjct: 176 METSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTV 235
Query: 372 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSQQYRALTVPELTQ 548
MS TT LR+PG +N DL L +++P PR HF M G+ PLT R + R TV ++ +
Sbjct: 236 MSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMR 295
Query: 549 QMFDAKNMMAACDPRH-----GRYLTVAAIFRGRMSMKEVDEQMLSIPKQE 686
++ KN+M + R+ +Y+++ I +G + +V E + I +++
Sbjct: 296 RLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERK 346
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 134 bits (325), Expect = 4e-32
Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 7/231 (3%)
Frame = +3
Query: 15 DAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 194
+ ++D++ +E + D L+GF + + Y +++ TYSV P+
Sbjct: 116 EEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQ 175
Query: 195 -KVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLT 371
+ SD VV+PYN++L++ +L N D +DN AL I L + NPT+ N LVS
Sbjct: 176 METSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTV 235
Query: 372 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSQQYRALTVPELTQ 548
MS TT LR+PG +N DL L +++P PR HF M G+ PLT R + R TV ++ +
Sbjct: 236 MSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMR 295
Query: 549 QMFDAKNMMAACDPRH-----GRYLTVAAIFRGRMSMKEVDEQMLSIPKQE 686
++ KN+M + R+ +Y+++ I +G + +V E + I +++
Sbjct: 296 RLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERK 346
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 35.5 bits (78), Expect = 0.034
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 237 SIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPG-QL 413
+I LVE + ++N DICY PT +L LVSL + G + RFP
Sbjct: 819 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDIST 878
Query: 414 N---ADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTV 533
N DL + + VP+ +FF LT +G ++ + +++
Sbjct: 879 NIKYLDLDQTGIEEVPWQIENFF--NLTKLTMKGCRELKCVSL 919
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 35.5 bits (78), Expect = 0.034
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 237 SIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPG-QL 413
+I LVE + ++N DICY PT +L LVSL + G + RFP
Sbjct: 780 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDIST 839
Query: 414 N---ADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTV 533
N DL + + VP+ +FF LT +G ++ + +++
Sbjct: 840 NIKYLDLDQTGIEEVPWQIENFF--NLTKLTMKGCRELKCVSL 880
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.9 bits (69), Expect = 0.42
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 30 VVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 209
VVRKE ENC+CLQ F RE D + Y V S ++ D
Sbjct: 7 VVRKEAENCNCLQVF--FVSGSFKVDSVEAKKKEENFRETLRDMANSKYEYVKSFELEDE 64
Query: 210 VVEPYNAVLSI 242
V+ P V+ I
Sbjct: 65 VMLPNLMVVRI 75
>At3g17670.1 68416.m02256 ferredoxin-related contains Pfam PF00515:
TPR Domain; similar to ferredoxin PetF2 (GI:22651984)
[Synechococcus sp. PCC 7002]
Length = 366
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 511 WLPRDVSGAKPGMKKCRRGKGTMLTASLRRSAFSCPG-NRRHVVTPDMVSDTRW 353
W+ R SGAK MK +G+ + S R F+C G R + V +M+ W
Sbjct: 40 WIVRTQSGAKTCMKSKAKGRCVICHGSGRVDCFNCCGKGRTNCVDVEMLPRGEW 93
>At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ
boundaries domain protein 30 (LBD30) identical to LOB
DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported
by full-length cDNA gi:16660631
Length = 228
Score = 31.1 bits (67), Expect = 0.74
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 288 EALYDICYRT-LKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 464
+A+ IC+ ++ +P YG ++H+VSL V+ +L+ LA +P P+
Sbjct: 73 DAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVS----LQTELSYLQAHLATLELPQPQ- 127
Query: 465 HFFMPGFAPLTSRGSQQYRALT-VPELTQQMFDAKNM 572
P P++S GS Q ++T +P ++ ++D ++
Sbjct: 128 ----PPQVPVSSSGSLQALSITDLPTISPSVYDLSSI 160
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 306 CYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLN-ADLRKLAVN 443
C ++VP+ T G+LN L L MSG +FP +N L L +N
Sbjct: 665 CLSLVEVPS-TIGNLNKLTYLNMSGCHNLEKFPADVNLKSLSDLVLN 710
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 306 CYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 473
C +++P+ + +L++L+ L MSG T FP +N K +N+ RL F
Sbjct: 801 CISIVELPS-SIRNLHNLIELDMSGCTNLETFPTGINLQSLK-RINLARCSRLKIF 854
>At3g14310.1 68416.m01810 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pectin methylesterase GB:Q42534 from [Arabidopsis
thaliana]
Length = 592
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 237 SIHQLVENTDETYCIDNEALYDI-CYRTLKVPNPTYGDLNHLVSLTMSGVTTCL 395
++H +E DET +E + D+ Y T K GDL L+S ++ TCL
Sbjct: 126 ALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCL 179
>At3g47190.1 68416.m05124 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to ACC oxidase from Brassica
oleracea [GI:559407], Cucumis melo [SP|Q04644],
Lycopersicon esculentum [SP|P05116]; contains Pfam
domain PF03171, 2OG-Fe(II) oxygenase superfamily
Length = 331
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +3
Query: 471 FMPGFAPL-----TSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGR 635
+ P F PL T G + + + +P + + D + + AC +L I
Sbjct: 7 YPPEFRPLMSEKSTETGLDRSKDIDIPVIDMEHLDMEKLREACKDWGIFHLENTGIPLTF 66
Query: 636 MS-MKEVDEQMLSIPKQEQQLL 698
MS +KE+ E +LS+P +E++ L
Sbjct: 67 MSQVKEITESVLSLPFEEKRTL 88
>At5g55570.1 68418.m06927 expressed protein
Length = 143
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 562 ASNICCVSS-GTVSARYCWLPRDVSGAKPGMKKCRRGKGTMLTASLRR 422
AS++C V S TV +R + PG ++ R G G M+T S RR
Sbjct: 6 ASSLCRVPSLWTVRSRPRQIKSTAGFVSPGRRRSRGGGGGMMTMSNRR 53
>At2g45490.1 68415.m05658 protein kinase, putative contains protein
kinase domain, Pfam:PF00069; similar to protein kinase
p46XlEg22 [Xenopus laevis] gi|609280|emb|CAA78914
Length = 288
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 246 QLVENTDETYCIDNEALYDICYRTLKVPNPTY 341
++VEN D Y +DN L +CY L NP +
Sbjct: 187 EMVENRDHDYAVDNWTLGILCYEFL-YGNPPF 217
>At4g24240.1 68417.m03479 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 353
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -1
Query: 658 SSTSFMDMRPRKMAATVR*RPWRGSQAAIMFLASNICCVSSGTVSARYCWL-PRDVSGAK 482
SS+S M +T+ P A F++S+ C S +S+ + + P +SG+
Sbjct: 172 SSSSSPPMLANGAPSTINFAPSPPVSATNSFMSSHRCDTDSTHMSSGFEFTNPSQLSGS- 230
Query: 481 PGMKKCRRGKGTMLTASLRRSAFSCPGNRRH 389
RGK + +ASL+R S P +R H
Sbjct: 231 -------RGKPPLSSASLKRRCNSSPSSRCH 254
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/71 (26%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Frame = +2
Query: 341 RRPEPPGVADHVRRDDVPAVPRTAERR---PAQAGGQHGXXXXXXXXXXXXXXXDVTRQP 511
RR PP H R PA+ RR PA G H R P
Sbjct: 23 RRSPPPATTGHHHRSPPPAITACHHRRPPLPATTAGHHRQLRPPSIPVTTNTGHRHCRPP 82
Query: 512 AVPRAHRAGAH 544
+ P +G H
Sbjct: 83 SNPATTNSGHH 93
>At3g45780.1 68416.m04953 protein kinase / nonphototropic hypocotyl
protein 1 (NPH1) / phototropin identical to SP|O48963
Nonphototropic hypocotyl protein 1 (EC 2.7.1.37)
(Phototropin) {Arabidopsis thaliana}, cDNA
nonphototropic hypocotyl 1 (NPH1) GI:2832240; contains
Pfam profiles PF00069:Protein kinase domain and
PF00785:PAC motif
Length = 996
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 239 HPSTSREYRRNLLHRQ*GPLRYLLQDSQGTEPNVRRPEPPGVADHVRRDDVPAV 400
+PST N + R P L D +GT P R + P ++ VR D AV
Sbjct: 28 NPSTQLTRPDNPVFRPEPPAWQNLSDPRGTSPQPRPQQEPAPSNPVRSDQEIAV 81
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 201 SDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKV 326
S+ ++ P ++ + +LV D TY + + ++ D C R +K+
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKM 118
>At2g45410.1 68415.m05649 LOB domain protein 19 / lateral organ
boundaries domain protein 19 (LBD19) identical to
SP|O22132 LOB domain protein 19 {Arabidopsis thaliana}
Length = 191
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 288 EALYDICYRTL-KVPNPTYGDLNHLVSL 368
+A+ +CY + ++ +P YG + HL SL
Sbjct: 72 DAVVTLCYEAMARIRDPVYGSVGHLFSL 99
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,255,641
Number of Sequences: 28952
Number of extensions: 254781
Number of successful extensions: 831
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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