Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1268
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 213 1e-55
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 3e-51
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 171 3e-43
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 170 1e-42
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 169 2e-42
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 162 2e-40
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 160 1e-39
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 150 8e-37
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 148 3e-36
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 147 6e-36
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 1e-35
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 146 2e-35
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 3e-35
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 7e-35
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 3e-34
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 136 2e-32
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 132 2e-31
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 124 8e-29
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 119 2e-27
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 113 2e-25
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 113 2e-25
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 112 3e-25
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 107 8e-24
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 104 5e-23
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 98 6e-21
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 94 1e-19
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 89 2e-18
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 87 9e-18
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 85 4e-17
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 6e-17
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 3e-16
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 82 4e-16
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 79 3e-15
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 7e-14
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 74 9e-14
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 74 9e-14
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 70 2e-12
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 49 3e-12
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 68 6e-12
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 68 8e-12
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 67 1e-11
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 67 1e-11
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 65 4e-11
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 65 4e-11
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 64 9e-11
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 64 1e-10
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 62 3e-10
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 62 3e-10
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 62 3e-10
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 60 1e-09
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 60 2e-09
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 60 2e-09
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 60 2e-09
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 59 3e-09
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 59 3e-09
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 58 8e-09
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 57 1e-08
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 54 1e-07
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 53 2e-07
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 52 5e-07
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 51 7e-07
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 49 4e-06
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 48 9e-06
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 48 9e-06
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 48 9e-06
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 46 2e-05
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 46 2e-05
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 43 2e-04
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 43 2e-04
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 42 3e-04
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 41 8e-04
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 41 0.001
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 40 0.001
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 37 0.016
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 36 0.029
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 36 0.029
SB_16073| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8) 34 0.087
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 34 0.087
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 34 0.087
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 33 0.15
SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_51083| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_41182| Best HMM Match : PAN (HMM E-Value=0.00063) 29 3.3
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 29 3.3
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 29 4.3
SB_2307| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_47450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 28 5.7
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_20875| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_29630| Best HMM Match : Sigma54_activat (HMM E-Value=1) 28 7.6
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 28 7.6
SB_14584| Best HMM Match : IBV_3C (HMM E-Value=4.1) 28 7.6
SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 213 bits (520), Expect = 1e-55
Identities = 97/173 (56%), Positives = 129/173 (74%)
Frame = +3
Query: 42 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 221
M YD LFKLLLIGDSGVGK+S+L RF++D F+ ++ISTIG+DFKIRT+ +DGK +KLQ
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQ 60
Query: 222 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 401
IWDTAGQERFRT+TTAYYR + GI+L+YDV ++F ++ W+ + E A V +++G
Sbjct: 61 IWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVG 120
Query: 402 NKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKM 560
NKCDL RQV ++ A + I F+ETSAKDS NVE F T+A ++KAK+
Sbjct: 121 NKCDLIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELKAKL 173
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 198 bits (483), Expect = 3e-51
Identities = 99/194 (51%), Positives = 136/194 (70%), Gaps = 21/194 (10%)
Frame = +3
Query: 42 MAKTYDCLFKLLLIGDSGVGKTSILFRFS---------------------EDAFNISFIS 158
M YD LFKLLLIGDSGVGK+ +L RF+ +D + S+IS
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYIS 60
Query: 159 TIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENI 338
TIG+DFKIRTI+LDGK +KLQIWDTAGQERFRTIT++YYRG+ GI++VYDVT+++SF N+
Sbjct: 61 TIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV 120
Query: 339 KNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVE 518
K W++ I+ A +V K+++GNKCDL +++ V ++ A + F+ETSAK++ NVE
Sbjct: 121 KQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVE 180
Query: 519 YAFYTLARDIKAKM 560
AF T+A +IK +M
Sbjct: 181 QAFMTMAAEIKNRM 194
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 171 bits (417), Expect = 3e-43
Identities = 82/167 (49%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = +3
Query: 48 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 227
KT + +FK++ IGDSGVGK+S L RF D + SF +TIG+DF+I+T++++G+ + +Q+W
Sbjct: 891 KTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLW 950
Query: 228 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNK 407
DTAGQERFR+IT Y+R + GI++ YDVT E SF N+K W+ ++EE A V KM+LGNK
Sbjct: 951 DTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNK 1010
Query: 408 CDL---DSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLA 539
DL + R V G+ LA +Y ++ETSAK N++ A Y LA
Sbjct: 1011 TDLAEDEESRVVKTIDGKNLANQYDALYMETSAKTGNNIQEAMYKLA 1057
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 170 bits (413), Expect = 1e-42
Identities = 72/151 (47%), Positives = 113/151 (74%)
Frame = +3
Query: 54 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 233
YD L+K++LIGDSGVGK+S+L RF+ + F+I STIG++F R+I ++GK +K Q+WDT
Sbjct: 9 YDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDT 68
Query: 234 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 413
AGQER+R IT+AYYRG++G +LVYD+T +K+F++++ W+ + E+A + M++GNKCD
Sbjct: 69 AGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCD 128
Query: 414 LDSQRQVSKERGEQLAIEYQIKFVETSAKDS 506
L R V+ + ++ E+ + F+E SA D+
Sbjct: 129 LKHLRAVASDDAKKYGDEHGLAFIEASALDA 159
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 169 bits (411), Expect = 2e-42
Identities = 77/135 (57%), Positives = 101/135 (74%)
Frame = +3
Query: 201 GKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD 380
GKK+KLQIWDTAGQERF TITTAYYRG+MGIMLVYDVTNEKSF NI W++ I+++A+ D
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANED 61
Query: 381 VEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKM 560
V++M++GNKCD+ +R +S+ +GEQLA Y I F+ETSA ++NVE +F L DI +
Sbjct: 62 VKRMLVGNKCDMYDKRVISQTKGEQLASSYGISFIETSALSNINVEKSFVVLTEDILNAV 121
Query: 561 EKKQKEASNPSGGKE 605
E + GK+
Sbjct: 122 CPPTVEETEKGKGKK 136
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 162 bits (394), Expect = 2e-40
Identities = 73/171 (42%), Positives = 122/171 (71%), Gaps = 1/171 (0%)
Frame = +3
Query: 57 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 236
D +FK+L++GD VGK+S++ RF +D FN +TIG+DF I DLDGKKVKLQ+WDTA
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTA 67
Query: 237 GQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCD 413
G+E++R ++ +++RG+ G +LV+DV+ ++SF++I++ W+ + + +D +++GNKCD
Sbjct: 68 GEEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCD 127
Query: 414 LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEK 566
++VS+E + L+ Y + ++ETSAKD+ NV AF +AR + +E+
Sbjct: 128 -KKDKKVSEEDIQNLSSCYNLSWLETSAKDNTNVNEAFEAMARKLVENLEQ 177
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 160 bits (388), Expect = 1e-39
Identities = 76/172 (44%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
Frame = +3
Query: 39 KMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGK-KVK 215
+M Y F+++LIGDS VGK+S+L +F+E F + T+G+DF +R ++L G ++K
Sbjct: 5 RMKPKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIK 64
Query: 216 LQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENA-SADVEKM 392
LQIWDTAGQERFR+IT +YYR ++G +++YD+TN SF N+ +W + ++ A+V M
Sbjct: 65 LQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFM 124
Query: 393 ILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI 548
++G+K D +S+R VS E GE A + + F+ETSAK N+E AF ++A ++
Sbjct: 125 LVGHKIDKESKRVVSTEEGECFAEAHNMMFIETSAKVLCNIEEAFISVAEEV 176
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 150 bits (364), Expect = 8e-37
Identities = 70/169 (41%), Positives = 116/169 (68%), Gaps = 6/169 (3%)
Frame = +3
Query: 63 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 242
+FK++L GD+ VGK+S + R + F+ + ST+G+DF+++T+ +DGK LQ+WDTAGQ
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQ 501
Query: 243 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL-- 416
ERFR+I +Y+R + G++L+YDVT E SF ++++W+ IEE+ S V M+ GNK D+
Sbjct: 502 ERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQ 561
Query: 417 ----DSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIK 551
+++ ++ E G +LA E+ F+ETS+K++ N+ A LAR ++
Sbjct: 562 SAAAENKTVITAESGSRLAKEHGALFIETSSKENKNIAEACIELARMLR 610
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 148 bits (359), Expect = 3e-36
Identities = 67/127 (52%), Positives = 98/127 (77%)
Frame = +3
Query: 138 FNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTN 317
F+ S+I+TIG+DFKIRTI++DG+KVKLQIWDTAGQERFRTIT+ YYRG+ G+++VYDVT+
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 318 EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSA 497
+F N+K W+ I++N DV ++++GNK D S++ V ++ + I+ ETSA
Sbjct: 62 ADTFVNVKRWLHEIDQNCD-DVIRILVGNKDDCPSKKVVETADLQKFGEQMNIRVFETSA 120
Query: 498 KDSLNVE 518
K+++NVE
Sbjct: 121 KENINVE 127
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 147 bits (357), Expect = 6e-36
Identities = 61/99 (61%), Positives = 88/99 (88%)
Frame = +3
Query: 48 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 227
+ +D +FKLL+IG+S VGKTS LFR+++D+F +F+ST+GIDFK++T+ + K+VKLQIW
Sbjct: 16 QNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIW 75
Query: 228 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKN 344
DTAGQER+RTITTAYYRG+MG +L+YD+TNE+SF+ +++
Sbjct: 76 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAVQD 114
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 146 bits (355), Expect = 1e-35
Identities = 70/175 (40%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 245
FK+L++GD GVGKTS++ RF++ F + ST+G+D R +D+ G +VKLQ WDTAGQE
Sbjct: 12 FKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
Query: 246 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL-DS 422
+FR IT +YYR + ++LV+D+TN +F +I W+ N+++ + ++ K+++GNK DL +
Sbjct: 72 KFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKGA 131
Query: 423 QRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQKEASN 587
R+V+ LA ++ ++ETSAK NVE LA ++ + + E S+
Sbjct: 132 SRKVNTRSAANLAEFEELLYLETSAKWDDNVEVLIAELAEQLRENAKNRVFEESD 186
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 146 bits (353), Expect = 2e-35
Identities = 69/169 (40%), Positives = 105/169 (62%)
Frame = +3
Query: 60 CLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAG 239
C FKL+L+G+S VGK+S++ RF + F+ STIG F +T+ LD VK +IWDTAG
Sbjct: 20 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAG 79
Query: 240 QERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLD 419
QER+ ++ YYRG+ ++VYD+TN+ +F K W++ ++ AS ++ + GNK DL
Sbjct: 80 QERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLA 139
Query: 420 SQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEK 566
S+R V E + A + + F+ETSAK ++NV F + + K K K
Sbjct: 140 SKRMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIFLAIGKKGKKKKGK 188
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 145 bits (351), Expect = 3e-35
Identities = 64/127 (50%), Positives = 94/127 (74%)
Frame = +3
Query: 54 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 233
Y LFK++L+GD+ VGKT ++ +F++ F + TIG+DF I+T+D+DG+KVKLQIWDT
Sbjct: 4 YSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDT 63
Query: 234 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 413
AGQERFR+IT +YY + G+++ YD+TN+KSFE++ W+ + S DV I+GNK D
Sbjct: 64 AGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSD 123
Query: 414 LDSQRQV 434
L + R+V
Sbjct: 124 LSTNRKV 130
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 144 bits (348), Expect = 7e-35
Identities = 62/136 (45%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
K+L++G+SGVGK+S+L RF++D F+ +TIG+DFK++T+ ++G K KL IWDTAGQER
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIE-ENASADVEKMILGNKCDLDSQ 425
FRT+T +YYRG+ G++LVYD + ++F+ ++ W+ +E + D+ KM++GNK D S
Sbjct: 70 FRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKIDKHS- 128
Query: 426 RQVSKERGEQLAIEYQ 473
S + G++L +Y+
Sbjct: 129 ---SSKCGQKLLGDYR 141
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 142 bits (343), Expect = 3e-34
Identities = 67/160 (41%), Positives = 102/160 (63%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
K++ +GD GVGK+S+ RF D F + TIGIDF +T+ LD +V+LQIWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQR 428
FR + +Y R S ++V+D+TN SFE++ +W++ + + +I+GNK D +R
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRR 284
Query: 429 QVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI 548
+VS + E+ A + +VETSAK NV+ F L++D+
Sbjct: 285 KVSYDVAEKSAERLGLSYVETSAKSGYNVKLLFTKLSKDL 324
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 136 bits (328), Expect = 2e-32
Identities = 63/101 (62%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
Frame = +3
Query: 288 GIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIE 467
GIMLVYD+T EK+F+NI W+RNIEE+A+ DVEKMILGNKCD+D +R VS+ERGEQ+A E
Sbjct: 127 GIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIARE 186
Query: 468 YQIKFVETSAKDSLNVEYAFYTLARDI-KAKMEKKQKEASN 587
+ I+F+ETSAK ++N+E AF LA+DI K ++ K +E SN
Sbjct: 187 HGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSEEPSN 227
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +3
Query: 48 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTI 164
K+YD LFKLLLIGDSGVGKT ILFRFS+DAFN +FISTI
Sbjct: 4 KSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 132 bits (319), Expect = 2e-31
Identities = 60/150 (40%), Positives = 98/150 (65%)
Frame = +3
Query: 159 TIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENI 338
TIG++F + +++ GK VKLQIWDTAGQERFR++T +YYRG+ G +LVYD+++ ++F ++
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSL 186
Query: 339 KNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVE 518
NW+ + AS ++ +++GNK DLD+ R+V+ + A E ++ F+ETSA NVE
Sbjct: 187 TNWLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVE 246
Query: 519 YAFYTLARDIKAKMEKKQKEASNPSGGKEW 608
F +R I K+E + + G ++
Sbjct: 247 EGFLKCSRTILNKIESGELDPDRMGSGIQY 276
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 129 bits (311), Expect = 2e-30
Identities = 71/199 (35%), Positives = 111/199 (55%), Gaps = 5/199 (2%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 245
FK+++IGDS VGKT + +R F +TIG+DF ++++L+G+ VKLQ+WDTAGQE
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 246 RFR-TITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENA-SADVEKMILGNKCDLD 419
RFR ++ YYR ++ +YD+T + SFE + WI +A S DV K+++GNKCDL
Sbjct: 107 RFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLG 166
Query: 420 SQRQVSKERGEQLAIEYQIKFVETSAKDSL---NVEYAFYTLARDIKAKMEKKQKEASNP 590
+R VS + A + + E S K+ +E F TL + K +
Sbjct: 167 LERTVSSNIARKFADSHNMPLWEISIKNDAELEQIEAIFLTLTHKL-LKHKPLMNRERTM 225
Query: 591 SGGKEWRPQADAERRSQAG 647
+ + ++ +RRS+ G
Sbjct: 226 TADENVSDESKVKRRSRGG 244
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 124 bits (298), Expect = 8e-29
Identities = 59/131 (45%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Frame = +3
Query: 210 VKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEK 389
VKLQIWDTAGQERFRTIT +YYR G+++ YD+T +F+N+ W ++++ A + K
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIK 154
Query: 390 MILGNKCDLDSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAFYTLARDIKAKMEK 566
+++GNK DL+ +R+VS E A Y + +ETSAKD+ N+E AFY LAR++K + E+
Sbjct: 155 LLVGNKKDLEREREVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLARELKNRCEE 214
Query: 567 KQKEASNPSGG 599
+ GG
Sbjct: 215 GSGLENIDDGG 225
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 119 bits (287), Expect = 2e-27
Identities = 53/114 (46%), Positives = 83/114 (72%), Gaps = 11/114 (9%)
Frame = +3
Query: 63 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTI-----------DLDGKK 209
L K L +GDSGVGKTS+L+++++ FN F+ TIGIDF+ + + G++
Sbjct: 106 LIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQR 165
Query: 210 VKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENA 371
+ LQ+WDTAGQERFR++TTA++R +MG +LV+D+T+E+SF NI+NW+ ++ +A
Sbjct: 166 IHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHA 219
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +3
Query: 390 MILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKK 569
++LGNK DL+ R V + LA +K+ ETSA NV + L + +ME
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLDQVMVRMENC 529
Query: 570 QKEASNPS 593
A+ P+
Sbjct: 530 VDRATLPN 537
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 116 bits (279), Expect = 2e-26
Identities = 68/180 (37%), Positives = 101/180 (56%), Gaps = 6/180 (3%)
Frame = +3
Query: 78 LIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 257
L D GVGK+S++ RF F+ TIG++F + + LDG+ LQIWDTAGQERF++
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 258 ITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA-DVEK---MILGNKCDLDSQ 425
+ T +YRGS +LVY V + KSF N+ W + A D + ++LGNK D++
Sbjct: 276 LRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEG- 334
Query: 426 RQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAFYTLARDIKA-KMEKKQKEASNPSGG 599
R VS+E + + + + ETSAKDS NV AF + + + + K + +GG
Sbjct: 335 RAVSQEEADSWCRQNGGVPYFETSAKDSTNVNDAFIAAVKRLNSLEQNKANRSGFTATGG 394
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 113 bits (271), Expect = 2e-25
Identities = 59/161 (36%), Positives = 95/161 (59%), Gaps = 4/161 (2%)
Frame = +3
Query: 33 VVKMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFI-STIGI-DFKIRTIDLDGK 206
++ +D FK L+IG+SGVGK+ ++ + F++ F+ ST+ + D D K
Sbjct: 340 IISRQPNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNK 399
Query: 207 KVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-- 380
K+KL I DTAGQER+ +I AY+RG G+ LV+D+T E +F + WI + AD
Sbjct: 400 KIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSN 459
Query: 381 VEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 503
++ +++GNK D++ R V+ R ++ A ++ETSAKD
Sbjct: 460 IQLILVGNKKDMEDNRAVTYSRAKEFAAMNGFPYIETSAKD 500
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 113 bits (271), Expect = 2e-25
Identities = 50/106 (47%), Positives = 75/106 (70%)
Frame = +3
Query: 225 WDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGN 404
W+ AGQERFRTIT++YYRG+ G+M+VYD+T +S+ N+ W+ +E AS V +++GN
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGN 432
Query: 405 KCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLAR 542
K DLD+ R+V + ++ A + + FVETSAK + NV+ AF L+R
Sbjct: 433 KIDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAFLVLSR 478
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 112 bits (269), Expect = 3e-25
Identities = 62/178 (34%), Positives = 104/178 (58%), Gaps = 1/178 (0%)
Frame = +3
Query: 63 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 242
LFK++L+G++GVGKTS+ +R E+ F +TIGID + + + K+V L +WDTAG
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 243 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDS 422
ERFRT+T YYRG+ +L+++V + S + + +WI + +E D K+++ NK DLD
Sbjct: 71 ERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDE-FCPDALKVLVANKIDLD- 128
Query: 423 QRQVSKERGEQLAIEYQIKFV-ETSAKDSLNVEYAFYTLARDIKAKMEKKQKEASNPS 593
QV+ E E A ++ SAK + A +A+ + + ++ + ++ N S
Sbjct: 129 -EQVTTESVELFASSHECHLTFRISAKTGEGIGKACTQIAKALLRENKELEDDSHNES 185
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 107 bits (257), Expect = 8e-24
Identities = 51/121 (42%), Positives = 75/121 (61%)
Frame = +3
Query: 240 QERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLD 419
QER+R IT+AYYRG+MG +LVYD+ SF N+ W+ + ++AS D+ +++GNK DL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 420 SQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQKEASNPSGG 599
R + RG+Q A E+ + F+ETSA DS NV AF + I K+ + + E S +
Sbjct: 62 HLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELEKSGQAHE 121
Query: 600 K 602
K
Sbjct: 122 K 122
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 104 bits (250), Expect = 5e-23
Identities = 48/73 (65%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
Frame = +3
Query: 273 YRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGE 452
Y GIMLVYD+TN+KSFE +NWIRNIEE+AS DVEKM+LGNKCD++ +RQVSKERGE
Sbjct: 82 YEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGE 141
Query: 453 Q---LAIEYQIKF 482
Q L + Y++ F
Sbjct: 142 QGDLLFLMYKVPF 154
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 97.9 bits (233), Expect = 6e-21
Identities = 48/131 (36%), Positives = 69/131 (52%)
Frame = +3
Query: 195 LDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENAS 374
++ K K IWDTAGQERF+++ YYR + +LVYD+T E +F +++ WIR ++
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGP 63
Query: 375 ADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKA 554
D+ + GNKCD QR V + + A F ETSA S NV + F L
Sbjct: 64 QDIVIAVAGNKCDKADQRDVQVQDAQDFAGSVDAIFAETSALTSKNVHWLFEELYTHDLL 123
Query: 555 KMEKKQKEASN 587
KK + +N
Sbjct: 124 TYLKKNVDVAN 134
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 94.7 bits (225), Expect = 6e-20
Identities = 41/95 (43%), Positives = 66/95 (69%)
Frame = +3
Query: 285 MGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAI 464
+GI+LVYD+T E SF++I W++NIE+NAS +V K++LGNK D + +R + +RG +
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGE 62
Query: 465 EYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKK 569
+ ++F E SA+ NV+ AF +AR IK + E++
Sbjct: 63 DNNLEFYEASARTGENVQQAFMAVARKIKEQRERQ 97
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 93.9 bits (223), Expect = 1e-19
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Frame = +3
Query: 165 GIDFKIRTIDLDGK-KVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIK 341
G+ + + GK K K I DTAGQE + + Y R G + V+ V N KSFE+I
Sbjct: 261 GVGHRAHSYSKGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDIN 320
Query: 342 NWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVE 518
+ I+ A+ M+L GNKCDL QR VS ++LA Y I F ETSAK V+
Sbjct: 321 QYREQIKRVKDAEEVPMVLVGNKCDL-PQRTVSTSDAQELAKSYNIPFQETSAKTRQGVD 379
Query: 519 YAFYTLARDIK 551
AFYTL R+I+
Sbjct: 380 DAFYTLVREIR 390
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 92.7 bits (220), Expect = 2e-19
Identities = 51/172 (29%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +3
Query: 21 RNQIVVKMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTID-L 197
+ + ++M Y FK+L++GD GK S + R+ + ++ + TIG+DF ++TI
Sbjct: 4 KKAVPLQMLNQYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWA 63
Query: 198 DGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEE---- 365
++LQIW AGQERF ++T YY+G+ ++++D+ + + + W ++++
Sbjct: 64 QNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKL 123
Query: 366 NASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQ-IKFVETSAKDSLNVE 518
++ V +++GNK DL R V KE ++L E+ + + E S K+ +NV+
Sbjct: 124 HSRKPVPCILVGNKSDL-PDRPVDKEIIDKLCKEHSFLCWTEMSVKEDINVK 174
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 89.4 bits (212), Expect = 2e-18
Identities = 47/158 (29%), Positives = 84/158 (53%)
Frame = +3
Query: 75 LLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFR 254
L +GD G GKT+ + R F +I+T+G++ +K +WDTAGQE+F
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFG 95
Query: 255 TITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQV 434
+ YY ++++DVT+ +++N+ NW R++ E ++ ++ GNK D+ R+V
Sbjct: 96 GLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCGNKVDI-KDRKV 153
Query: 435 SKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI 548
K + + +++ + SAK + N E F LAR +
Sbjct: 154 -KAKAITFHRKKNLQYYDLSAKSNYNFEKPFLWLARKL 190
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 87.4 bits (207), Expect = 9e-18
Identities = 50/117 (42%), Positives = 75/117 (64%), Gaps = 5/117 (4%)
Frame = +3
Query: 222 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENAS-ADVEK--- 389
IWDTAGQERF+++ A+YRG+ +LV+DVT SF+ + +W AS D E
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 390 MILGNKCDLDSQRQVSKERGEQLA-IEYQIKFVETSAKDSLNVEYAFYTLARDIKAK 557
++LGNK DL++ R VS +R + + I + ETSAK+++NVE AF T+A++ A+
Sbjct: 61 VVLGNKIDLEN-RAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAKNALAQ 116
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 85.4 bits (202), Expect = 4e-17
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Frame = +3
Query: 48 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 227
K D +KL+++G GVGK+++ +F + F + TI ++ + + +D + L I
Sbjct: 6 KDVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLDIL 64
Query: 228 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNI-EENASADVEKMILGN 404
DTAGQE F + Y R G +LV+ VT+ SFE I + I + +I GN
Sbjct: 65 DTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGN 124
Query: 405 KCDLDSQRQVSKERGEQLA 461
K DL+ +R VS G++LA
Sbjct: 125 KSDLEYERTVSTAEGQELA 143
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 84.6 bits (200), Expect = 6e-17
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIR-TIDLDGKKVKLQIWDTAGQ 242
+ L+L+G +GVGK+++L RF F + T+ + + + TID D L I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDED--PATLHITDTAS- 184
Query: 243 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNW---IRNIEENASADVEKMILGNKCD 413
T Y + G ++VY + ++FE K IR I++ + ++ GNKCD
Sbjct: 185 ----TYEPVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCD 240
Query: 414 LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAK--MEKKQKEASN 587
L R VS++ + A E++ F ETSA +++N + F+ R I++ M K+ A N
Sbjct: 241 LKHCRAVSRQEAREFAAEHECVFHETSAANNINTKVIFHDCVRQIRSTHLMNKRANGAMN 300
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 82.6 bits (195), Expect = 3e-16
Identities = 56/184 (30%), Positives = 100/184 (54%), Gaps = 15/184 (8%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
KL+++GD GKT +L FS+D F ++ T+ ++ + I++DGK+V+L +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 5989
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDL--- 416
+ + Y + I++ + + + S ENI + W + ++ +V +++GNK DL
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRMD 6048
Query: 417 -DSQRQVSKERGEQLAIE---------YQIKFVETSAKDSLNVEYAFYTLAR-DIKAKME 563
+++R++ K + E + IE ++E SAK V F T R ++ K +
Sbjct: 6049 ENTKRELQKMKQEPVKIEEGRAMADKISAYAYLECSAKTKDGVREVFETATRAALQTKKK 6108
Query: 564 KKQK 575
KK K
Sbjct: 6109 KKGK 6112
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 81.8 bits (193), Expect = 4e-16
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = +3
Query: 54 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 233
YD LFK++LIGDSGVGK+++L RF+ + FN+ STIG++F R+I +DGK +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 79.8 bits (188), Expect = 2e-15
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Frame = +3
Query: 57 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 236
D K++ +GD VGKTS L+ + F FI++I D +T+++DGK+ + + DT
Sbjct: 7 DPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCDTP 65
Query: 237 GQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCD 413
G R +++ + +L +D+ N +SF NI++ W+ ++ S DV K+++GNK +
Sbjct: 66 GTMHPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLETS-DVPKVLVGNKME 124
Query: 414 LDSQRQVSKERGE-----------QLAIEYQIKFVETSAKDSLNVEYAFYT 533
L +Q S + G+ LA + I +VE SAK+ +E T
Sbjct: 125 LRCSQQESTDLGQTHDCVPFTEAKALACKSNIPYVENSAKELKGLEDVLMT 175
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 79.0 bits (186), Expect = 3e-15
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +3
Query: 240 QERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLD 419
QER+R IT+AYYRG+MG +LVYD+ SF N+ W+ + ++AS D+ +++GNK DL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 420 SQRQVSKERG 449
R + RG
Sbjct: 62 HLRMIENRRG 71
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 77.0 bits (181), Expect = 1e-14
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
KL+++GD GVGK++ L + +AF +I T+ D I LDGK + +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTV-FDNYSSNIMLDGKAYNVGLWDTAGQED 65
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCDLDSQ 425
+ + Y + ++ +D+ + SFENI++ W+ + + + K+++GNK DL S
Sbjct: 66 YDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHH-MPETPKILVGNKRDLRSA 124
Query: 426 RQ 431
+Q
Sbjct: 125 QQ 126
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 74.5 bits (175), Expect = 7e-14
Identities = 30/61 (49%), Positives = 49/61 (80%)
Frame = +3
Query: 54 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 233
YD LFK++LIGDSGVGK+++L R++++ F++ +TIG++ R ++++GK V+ QIWDT
Sbjct: 15 YDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDT 74
Query: 234 A 236
A
Sbjct: 75 A 75
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 74.1 bits (174), Expect = 9e-14
Identities = 40/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 245
+K++++G GVGK+++ +F F + TI DF + I++D L+I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTE 62
Query: 246 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNI-EENASADVEKMILGNKCDLDS 422
+F ++ Y + G +LVY + N ++F ++K I S +V +++GNK D+
Sbjct: 63 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYD 122
Query: 423 QRQVS 437
+R+VS
Sbjct: 123 EREVS 127
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 74.1 bits (174), Expect = 9e-14
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Frame = +3
Query: 42 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID-FKIRTIDLDGKKVKL 218
MA D ++K+ L G GVGKTSI R S D F S ID I + + KK+K+
Sbjct: 1 MAGPEDEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKI 60
Query: 219 QIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL 398
+WDT G E + ++T +Y S +++VY + S +K ++ + NA A + +++
Sbjct: 61 HLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPA-AKIVLV 119
Query: 399 GNKCDLDSQRQVSKE 443
NK DL + R++ +
Sbjct: 120 ANKMDLPNYRRLETD 134
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 73.3 bits (172), Expect = 2e-13
Identities = 48/179 (26%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
KL ++GD VGKT++ + + F +I T + ++DG K + ++D+AG E
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGED 67
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDLDSQ 425
F + Y + ++ +D+ + SFEN+ W+ + ++ S V ++++GNK DL +
Sbjct: 68 FDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPEL-DHFSPGVPRVLVGNKKDLRPK 126
Query: 426 RQ---------VSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQK 575
+ VS E G++ A ++++++E SA + NV+ T R + + KK K
Sbjct: 127 QDQEDSHSIDFVSYEEGKEAAQNFKMQYIENSALLNENVKEVITTSIRIARDNLPKKGK 185
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 71.7 bits (168), Expect = 5e-13
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-----GKKVKLQIWDT 233
++ ++GDSGVGKTS++ + S TIG +++ D GK L+ WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 234 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADV 383
G + +Y G G++LV+D+TN KSF N++ W+ + NAS D+
Sbjct: 68 GGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEV-LNASKDL 116
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 245
+K++++G GVGK+++ +F F + TI DF + TAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DF----------------YHTAGTE 46
Query: 246 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNI-EENASADVEKMILGNKCDLDS 422
+F ++ Y + G +LVY + N ++F ++K I S +V +++GNK D+
Sbjct: 47 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYD 106
Query: 423 QRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIK 551
+R+VS + LA + F ETSAK NV+ F + R +K
Sbjct: 107 EREVSVGEAKDLAEAWGCPFYETSAKTRSNVDKVFAEVVRRMK 149
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 49.2 bits (112), Expect(2) = 3e-12
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Frame = +3
Query: 270 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEEN----ASADVEKMILGNKCDLDSQRQV- 434
YY+ ++G +V+DVT +F ++ W +++ + + ++L NKCD + V
Sbjct: 710 YYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAKEGLVN 769
Query: 435 -SKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQKE 578
S + E A + I + ETSAK+ +NV A A+ + +K+ + +KE
Sbjct: 770 NSAQMDEYCADKGFIGWFETSAKEDVNVNEA----AKFLVSKILQNEKE 814
Score = 39.9 bits (89), Expect(2) = 3e-12
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +3
Query: 63 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 173
LFK+L+IGD GVGKTS++ R+ F++ + +T+ +
Sbjct: 671 LFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFN 707
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/131 (28%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
K++L GD+ VGKTS L +++ + T ++++ +++ +K L +WDT G
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQN--ELEGTPTAFANYELG-LEVGSQKFLLDLWDTEGTTE 64
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCDLDSQ 425
+ + Y+GS I+L +D++N ++FE I++ W+ + + ++++GNK D+
Sbjct: 65 YDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSI-RVLIGNKNDIRKT 123
Query: 426 RQVSKERGEQL 458
RQ RG+ L
Sbjct: 124 RQDKDRRGKVL 134
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 67.7 bits (158), Expect = 8e-12
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Frame = +3
Query: 57 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 236
D ++++ L+GD GVGKT++L RF F + TI ++ ++I++D V L+I DTA
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYR-KSINIDDVTVTLEILDTA 61
Query: 237 GQ-ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNW--------IRNIEENASAD--- 380
+ + + + R G ++VY + +F N+ + N+ N + D
Sbjct: 62 SRGQNSCKLRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKLSRDTNLPSNRTRDTRP 121
Query: 381 ------------------VEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDS 506
+ +++GNK DL +R V+++ G++LA Y F E SA +
Sbjct: 122 DSCPGLNEQTHDGLSKDAISVLVIGNKSDLIGERDVTRDEGQRLAETYGWLFAEASALEY 181
Query: 507 LNVEYAFYTLARDIKAKMEKKQKEASNPS 593
+ L RD+ AK + S PS
Sbjct: 182 EAADACIADLVRDMMAKRSMRNHRHSVPS 210
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 67.3 bits (157), Expect = 1e-11
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 10/192 (5%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 245
+K+ ++G GVGKTS+L F F+ + T+ D+ I ++++DG I DTAG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTY 71
Query: 246 RFRTITTAYYRGSMGIMLVYDVTNEKSFE---NIKNWIRNIEENASADVEKMIL---GNK 407
F + ++V+ + +E SF I + I +I+ A ++ +K+IL NK
Sbjct: 72 AFPVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEIYSIKVKAGSEAKKIILNLVANK 131
Query: 408 CDLD-SQRQVSKERGE-QLAIEYQI--KFVETSAKDSLNVEYAFYTLARDIKAKMEKKQK 575
D+D +R ++ R +L+ + +++E S+ + VE F+++ + I E+K+K
Sbjct: 132 LDIDCRERVITAARAHAELSKRSWLTGEYMEISSMLNFRVERTFHSIVKLIVEDFEEKEK 191
Query: 576 EASNPSGGKEWR 611
+ K+ R
Sbjct: 192 KKGRVRSTKKMR 203
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/66 (42%), Positives = 45/66 (68%)
Frame = +3
Query: 258 ITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVS 437
++TA R GI+LVYD+T KSF+N++ W+ +I +N E +++GNKCD+ R+V
Sbjct: 48 VSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREVP 107
Query: 438 KERGEQ 455
K +GE+
Sbjct: 108 KRKGEE 113
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 65.3 bits (152), Expect = 4e-11
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
K +++GD GVGKTS+L + D F S++ T + + T++++ K ++ DTAGQE
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHV-TVEVNKKLCMIEFCDTAGQED 78
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDLDSQ 425
F + Y + ++ + V + SF N+ WI I E +++G DL
Sbjct: 79 FDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIRE-FQPKAPIILVGTHSDLKDC 137
Query: 426 RQVSKERGEQLAIEYQIKFVETSAKDSLNVEY 521
++ E +Q + +K E K + V Y
Sbjct: 138 YKILTELSQQDSQPISVKKAEGLVKKTRCVCY 169
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Frame = +3
Query: 189 IDLDGKKVKLQIWDTAGQERF-----RTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIR 353
++L GK V L I DT G+ R + YR G ++V+DVT+ KSFE + W+
Sbjct: 10 LELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERVPTWLD 69
Query: 354 NIEENASADVEKMILGNKCDLD-SQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFY 530
++E+ ++ +++GNK D + ++ + A ++ETSA N++ F
Sbjct: 70 KVQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAKYATNNGFLYIETSALGMCNIDEIFA 129
Query: 531 TLARDIKAKMEKKQKEASNPSGGKEW 608
L +E ++A +G + W
Sbjct: 130 IL-------LELLMQQAEQTTGDRSW 148
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 64.9 bits (151), Expect = 5e-11
Identities = 43/167 (25%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDL--- 416
+ + Y + ++ + V + SFEN+K W+ I + +++G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQVDLRDD 122
Query: 417 ---------DSQRQVSKERGEQLAIEYQ-IKFVETSAKDSLNVEYAF 527
+ Q+ ++ E E+LA E + +K+VE SA ++ F
Sbjct: 123 QGTIEKLSKNKQKPIAVEAAEKLARELRAVKYVECSALTQKGLKNVF 169
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 64.1 bits (149), Expect = 9e-11
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +3
Query: 270 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEE-NASADVEKMILGNKCDLDSQRQVSKER 446
Y R G +++Y +T+ SF + IE + D+ +++GNK DL+ +R+V+ +
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQE 64
Query: 447 GEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKK 569
G++LA + F ETSA V+ AF+ L R+I+ K +++
Sbjct: 65 GQELAHRFDCPFFETSACQRHFVDDAFHGLVREIRKKEKQR 105
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +3
Query: 324 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 503
SF+ WI ++ DV M++GNK DL +RQV+ E GE+ A E + F+ETSAK
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETSAKA 72
Query: 504 SLNVEYAFYTLAR---DIKAKMEKKQKE 578
NV+ F +A +++ EK KE
Sbjct: 73 GYNVKQLFRRVAAALPGMESTTEKTNKE 100
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/69 (34%), Positives = 44/69 (63%)
Frame = +3
Query: 270 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 449
YYRG++G +LVYD+ ++EN++ W++ + ++A +++ M++GNK DL R V +
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEA 61
Query: 450 EQLAIEYQI 476
+ A Y I
Sbjct: 62 KAFAEIYHI 70
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 62.5 bits (145), Expect = 3e-10
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 9/176 (5%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 245
F ++ G S VGKTS++ RF AFN + TI DF I+ + + + +LQI DT+G
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTY 87
Query: 246 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQ 425
F + +LVY + +SF + + I E +++ NK DL
Sbjct: 88 EFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNRHPCIVVCNKNDLPLA 147
Query: 426 RQ---VSKERGEQLA------IEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEK 566
++ RG +++ E+Q +++ SAK++ VE F L ++K K
Sbjct: 148 THLGVLTDHRGLRISAQHLVQTEWQSLWIDCSAKENSQVEDIFLRLMDEMKRAKHK 203
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +3
Query: 78 LIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 257
+IG GKT+IL+R + +S + T+G F + T+ K + +WD GQ++ R
Sbjct: 1 MIGLDNAGKTTILYRLKLEEV-VSTVPTLG--FNVETVTY--KNISFTVWDIGGQDKIRA 55
Query: 258 ITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRN-IEENASADVEKMILGNKCDLDSQRQV 434
+ YY+G GI+ V D + + E +N + + E V +++ NK D+ +
Sbjct: 56 LWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTA 115
Query: 435 SKER 446
S+ R
Sbjct: 116 SEIR 119
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 60.5 bits (140), Expect = 1e-09
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Frame = +3
Query: 63 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGK-KVKLQIWDTAG 239
+F+++++G GVGKTS++ RF F+ + T+G D +++ L L+I DTAG
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTLSKDFNAFLEIMDTAG 165
Query: 240 QERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLD 419
F + + + +LVY V + S + R I V +++GNK DL
Sbjct: 166 SYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDLV 225
Query: 420 SQRQVSKERGEQLAIEYQI 476
S+ R + Y +
Sbjct: 226 SEELRQSTRAQMRKTNYAV 244
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/119 (25%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = +3
Query: 72 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERF 251
++L+GDS GKT++L + + FN + +T+ + +++DG++++L +WDT+G E +
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLWDTSGHEDY 293
Query: 252 RTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDLDSQ 425
+ Y +++ +D++ K+ ++I + WI + + + +++G K DL S+
Sbjct: 294 DHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCD-LCPNKPVLLVGCKQDLRSE 351
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 60.1 bits (139), Expect = 2e-09
Identities = 35/134 (26%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
++L++G GKT+IL++ ++ I TIG F + +++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVESVEY--KNISFTVWDVGGQDK 73
Query: 249 FRTITTAYYRGSMGIMLVYDVTN-EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQ 425
R + Y++ + G++ V D + E+ E+ + + ++E+ D +++ NK DL +
Sbjct: 74 IRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVLVMANKQDLPNA 133
Query: 426 RQVSKERGEQLAIE 467
VS E E+L ++
Sbjct: 134 LSVS-EITEKLGLQ 146
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 60.1 bits (139), Expect = 2e-09
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
+L L+G GKT+ + + F+ I T+G F +R + V +++WD GQ R
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGN--VTIKVWDIGGQPR 77
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRN-IEENASADVEKMILGNKCDLDSQ 425
FR++ Y RG I+ + D + E KN + N +E+ A + ++LGNK DL +
Sbjct: 78 FRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNKKDLPNS 137
Query: 426 RQVSKERGEQL 458
KE E+L
Sbjct: 138 LD-EKELVERL 147
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 59.7 bits (138), Expect = 2e-09
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
+++++G GKT+IL++ +S I TIG F + T+ K V L IWD GQ++
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKE-TVSTIPTIG--FNVETLQ-PTKNVTLTIWDVGGQDK 76
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNI-EENASADVEKMILGNKCDL 416
R + Y++G+ G++ V D ++ K + + + + DV +++ NK DL
Sbjct: 77 IRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVANKQDL 133
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
+LL++G GKT+IL+ D ++ I TIG + ++ ++ K +K +WD GQ++
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVEV----VEYKNIKFTVWDIGGQDK 146
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWI-RNIEENASADVEKMILGNKCDLDSQ 425
R + Y++ + G++ V D + + K + + ++E ++L NK DL
Sbjct: 147 IRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALLVLANKQDLPDS 206
Query: 426 RQVSKERGEQLAI 464
+ E E+L++
Sbjct: 207 MSTT-ELSEKLSL 218
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = +3
Query: 375 ADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKA 554
A+ + +++GNKCD++ +R VS +RG+QLA + ++F ETSAKD+ NV+ F L I
Sbjct: 11 ANAQVILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVFERLVDIICD 70
Query: 555 KMEK 566
KM +
Sbjct: 71 KMSQ 74
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 57.6 bits (133), Expect = 8e-09
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Frame = +3
Query: 183 RTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIE 362
+ + + ++L I DTAG +Y G ++VY +T+ S+E + ++ +
Sbjct: 6 KELRIGDSSMELDILDTAGNGE-----ASYIHNGDGFVVVYSITDYYSYEMARQLVKLVT 60
Query: 363 ENASAD----VEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFY 530
+ D + +++GNK DL R V+K+ + A EY ETSA + NV FY
Sbjct: 61 QVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEAREFASEYGCSHYETSALTNRNVHVIFY 120
Query: 531 TLA---RDIKAKMEKKQKEASNPSGG 599
+A R KA + +K P+ G
Sbjct: 121 NMAFQTRFTKASNRETRKNNCPPNAG 146
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
++L++G GKT+IL++ ++ I TIG F + T++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 249 FRTITTAYYRGSMGIMLVYDVTN-EKSFENIKNWIRNIEENASADVEKMILGNKCDL 416
R + Y++ + G++ V D + E+ E + R + E+ D ++ NK DL
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQDL 130
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/72 (34%), Positives = 43/72 (59%)
Frame = +3
Query: 357 IEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTL 536
++ N + + +++GNKC LD +R+VS G LA E + F ETSA+ ++NV F L
Sbjct: 1 MQHNCEQEAKAVLVGNKCHLDCEREVSVAEGRGLAKELGLPFFETSAEKNINVTDCFEAL 60
Query: 537 ARDIKAKMEKKQ 572
I ++++K+
Sbjct: 61 VDSILEEIKQKE 72
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Frame = +3
Query: 45 AKTYDCLFKLLLIGD-SGVGKTSILFRFSEDAFNISFIS--TIGIDFKIRTID---LDGK 206
++ D FK++ +GD +G GK +SF TIG+DF + I+ D K
Sbjct: 44 SRASDHTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRETDKK 103
Query: 207 K---VKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA 377
K VKLQ WD A ERF +T Y R G ++ + + + W ++E S
Sbjct: 104 KDSTVKLQFWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSALKWSEKVKEANSG 163
Query: 378 DVEKMIL 398
V +++
Sbjct: 164 SVPMVLV 170
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Frame = +3
Query: 258 ITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA-----DVEKMILGNKCDLDS 422
+ +Y+ + G +LVYDVT+ +SFE + W+ I+++ + V ++ NK D
Sbjct: 6 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVD-SR 64
Query: 423 QRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQK 575
+R V + G Q A ++ + ETSA+ + F TL + +E K
Sbjct: 65 KRLVEESEGRQWAENHKFCYFETSAQTGDGIPEVFQTLFTGVVKALENGGK 115
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 248
K+ ++G VGK+S+ +F E F S+ TI F + I G++ L++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KNIKYKGQEFFLELVDTAGQDE 66
Query: 249 FRTITTAYYRGSMGIMLVYDVTNEK 323
+ +Y G G +LVY VT+ K
Sbjct: 67 YSIFPQSYSMGIHGYILVYAVTSAK 91
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +3
Query: 390 MILGNKCDLDSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAFYTL 536
+++GNKCDL+ +R V K++G+ LA ++ F+ETSAK +NV FY L
Sbjct: 2 VLVGNKCDLEDERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIFYDL 51
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 48.8 bits (111), Expect = 4e-06
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Frame = +3
Query: 90 SGVG-KTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITT 266
SG G KT+IL++ ++ + T+ F + TI K + +WD GQ++ R +
Sbjct: 117 SGRGRKTTILYKLKLKE-TVNTVPTVA--FNVETIS-PCKNITFSVWDIGGQDKIRRLWR 172
Query: 267 AYYRGSMGIMLVYD-VTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL 416
Y++G+ GI+ V D E+ FE + R ++ + V +++ NK DL
Sbjct: 173 HYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDL 223
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 48.4 bits (110), Expect = 5e-06
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNIS----FISTIGIDFKIRTIDLDGKKVKLQIWDT 233
+K++L+GD+GVGK+ ++ R + + + + T G T L + DT
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHASYFTAS---NSCHLYLLDT 70
Query: 234 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEE---NASADVEKMILGN 404
+G E +R +T Y + ++ + + + S +++ W + + S+ V K +LG
Sbjct: 71 SGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLDVFLGDSSRVLKFVLG- 129
Query: 405 KCDLDSQRQVS-KERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIK 551
C +D+Q + + + E A + TSA NV F +A +K
Sbjct: 130 -CKIDTQHEADIQPKAEDFASRIGAELSITSAITGTNVNDFFERIADKLK 178
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/87 (28%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +3
Query: 228 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNK 407
DTAG+E++ +++ Y RG+ ++ YD+T E S + + + ++ + A + +I+G K
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCK 337
Query: 408 CDL--DSQRQVSKERGEQLA-IEYQIK 479
DL D R++++ G +LA ++ ++K
Sbjct: 338 KDLVTDDTREITEAAGMELAKVQNELK 364
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 47.6 bits (108), Expect = 9e-06
Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNI--SFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 242
K+L+ GDS VGK++++ F D + ++ T+G + ++ +++ + +W+
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIP--ETTDSVWEHPNL 64
Query: 243 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD--VEKMILGNKCDL 416
+++ YDV+NE+SF W+ A +D + ++ K DL
Sbjct: 65 ----------------VIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDL 108
Query: 417 DSQRQVSKERGEQLAIEYQIKFVETSA 497
+R +S ++G+ A +++ E SA
Sbjct: 109 KQRRVISTKQGKDYANSKNLEYFECSA 135
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 47.6 bits (108), Expect = 9e-06
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID-FKIRTIDLDGKKVKLQIWDTAGQ 242
F ++++G GKTSIL+R + F +++T+ F + TI K ++ ++WD G+
Sbjct: 22 FHVVMLGLDKSGKTSILYR---NKFR-EYVNTVPTTAFNVETIR-PFKGIRFKVWDIGGR 76
Query: 243 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKCD 413
E+ R + AY R + ++ V D T+ E ++ + N+ +A + +I NK D
Sbjct: 77 EQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAPILIFANKQD 134
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +3
Query: 216 LQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMI 395
+ +WDT G E + ++T +Y S +++VY + S +K ++ + NA A + ++
Sbjct: 1 IHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPA-AKIVL 59
Query: 396 LGNKCDLDSQRQVS-----KERGEQLAIEYQIKFVETSAKD 503
+ NK DL + R++ KE + E+Q + + +D
Sbjct: 60 VANKMDLPNYRRLETDLRVKEMFPKTEYEHQFRISAKTGED 100
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Frame = +3
Query: 57 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 236
+ +F+L ++G GVGK+S+ R+ ++ F ID GK +++ DTA
Sbjct: 2596 ETMFRLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTA 2641
Query: 237 GQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNW----IRNIEE-NASADVEKMILG 401
GQE + + + ++++ + + S+ +K+ IR EE N + + +I+G
Sbjct: 2642 GQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTTCTIPMVIVG 2701
Query: 402 NK 407
NK
Sbjct: 2702 NK 2703
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 44.4 bits (100), Expect = 8e-05
Identities = 32/132 (24%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFR--FSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 242
+++++GDS VGKT +L + + + + + +I ++ + I +DGK KL++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNY-VANIIVDGKVYKLELCDV--- 75
Query: 243 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCDLD 419
+ T + + + L + V + SF +++N W + +N S + +++G K DL
Sbjct: 76 DNLDTKISKPFSDTDVFCLCFSVGDMDSFRHVENKWYAEV-KNCSPNSPIIVVGTKTDL- 133
Query: 420 SQRQVSKERGEQ 455
+ +K+RG++
Sbjct: 134 -RENENKKRGKK 144
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 13/129 (10%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRF------SEDAFNISFISTIGIDFKIRT-IDLDGKKVKLQIW 227
KL ++GD+ VGKT IL+R+ +D + + S + T D + W
Sbjct: 10 KLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVTYW 69
Query: 228 DTAGQERFRTITTA-----YYRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEK 389
DT R + + YR + ++ +D+TN SF+N+ W+ + ++ +
Sbjct: 70 DTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPEL-KHYMPETPV 128
Query: 390 MILGNKCDL 416
+++GNK D+
Sbjct: 129 LVVGNKKDM 137
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/90 (25%), Positives = 50/90 (55%)
Frame = +3
Query: 63 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 242
+ K+++IG+ GVGK+++ RF F + T+ ++ + ++ G+ V +++ DTAG+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYR-QDAEVAGEVVAIELTDTAGE 919
Query: 243 ERFRTITTAYYRGSMGIMLVYDVTNEKSFE 332
+ G + ++L Y +T+ SF+
Sbjct: 920 NSPAKLERCLEIGEVFVVL-YSITSRHSFD 948
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 42.3 bits (95), Expect = 3e-04
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGI-----DFKIRTIDLD--------GKK 209
KL+++G G GKT++L S +ST+GI +I T L G
Sbjct: 668 KLMVVGIQGYGKTTLLAALKGQPLP-SNLSTVGIVVDEWSVQISTSLLSRIGITSGIGPT 726
Query: 210 VKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVT-NEKSFENIKNWIRNIEENASADVE 386
+ L WD AGQ + + S + V++ T E+ EN+++W+ NI+ A +
Sbjct: 727 ITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKARAPYS-D 785
Query: 387 KMILGNKCD 413
+I+G D
Sbjct: 786 VIIIGTHLD 794
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 198 DGKKVKLQIWDTAGQERFRTITTAYYR 278
+G+ ++L +WDTAGQE F IT AYYR
Sbjct: 30 NGEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 174 FKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTN-EKSFENIKNWI 350
F + T++ K + +WD GQ++ R + Y++ + G++ V D + E++ E +
Sbjct: 500 FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELS 557
Query: 351 RNIEENASADVEKMILGNK 407
R + E+ D ++ NK
Sbjct: 558 RMLAEDELRDAVLLVFANK 576
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSE-DAFNISF-ISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 242
KL+L+G+SG GKTS E +A N + T+G+ + ++ DG +++Q+ D AGQ
Sbjct: 262 KLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDG--LEVQVVDCAGQ 319
Query: 243 ERFRTITTAYYRGSMGIMLV------YDVTNEKSFENIKNWIR 353
R++ +T ++ + L+ Y T E N +WI+
Sbjct: 320 RRYQ-LTHPFFLSEEALHLLVINLHSYKKTPESFERNAGDWIK 361
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +3
Query: 393 ILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQ 572
+LGNK DL+ R V + LA +K+ ETSA NV + L + +ME
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLDQVMVRMENCV 61
Query: 573 KEASNPS 593
A+ P+
Sbjct: 62 DRATLPN 68
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 37.1 bits (82), Expect = 0.012
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGI---DFKIRTIDLDGKKVKLQIWDTAG 239
KL+L+G GKT+++ R D +T GI +F+++ D ++ +IWD G
Sbjct: 553 KLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKK-DFLHREFIFKIWDFGG 611
Query: 240 QERFRTITTAYYRGSMGIMLVYDV-TNEKSFENIKNWIRNIEENASADVEKMILGNKCD 413
QE + + +LV+++ E+ ++ W+ I A +I+G D
Sbjct: 612 QEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTISARAPGS-SLVIVGTHLD 669
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 36.7 bits (81), Expect = 0.016
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 39 KMAKTYDCLFKLLLIGDSGVGKTSILFRF-SEDAFNISFISTIGIDFKIRTIDLDGKKVK 215
K+ D ++LL+G GKT+IL SED +I+ T G F I+++ G +
Sbjct: 9 KLKSEKDREMRILLLGLDNSGKTTILKSLASEDVLHIT--PTQG--FNIKSVQSKG-GFR 63
Query: 216 LQIWDTAGQERFRTITTAYYRGS 284
L +WD GQ + R Y+ +
Sbjct: 64 LNVWDIGGQRKIRPYWKNYFENT 86
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 258 ITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEEN 368
+ +Y+ + G +LVYDVT+ +SFE + W+ I+++
Sbjct: 1 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKD 37
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 35.9 bits (79), Expect = 0.029
Identities = 28/105 (26%), Positives = 47/105 (44%)
Frame = +3
Query: 189 IDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEEN 368
+ + G+ + + + DTAG+ + ++ + L+Y VT+ SFE R I++N
Sbjct: 27 LTVHGQYIAMDVVDTAGKNTPDKVDALLEAANI-VYLLYSVTDRASFEEAAWLARRIQQN 85
Query: 369 ASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 503
K I+ DL QV + G LA E FV+ S +
Sbjct: 86 ------KAIVATNKDLKHLSQVLEYEGRFLAQELDGLFVQVSISE 124
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +3
Query: 36 VKMAKTYDCLFKLLLIGDSGVGKTSILFRF 125
+K K D L K+LLIGDS VGKT +L F
Sbjct: 3 MKPRKKQDYLLKVLLIGDSNVGKTKLLLTF 32
>SB_16073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 35.5 bits (78), Expect = 0.038
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNI-------------SFISTIGIDFKIRTIDLDGKK 209
KLL IG G GKTS + ++ N+ +T+ +D+ T+ DG+
Sbjct: 5 KLLFIGPVGAGKTSAIRALCDEHHNLETEAKASDITGLRKATTTVAMDYGCLTLS-DGEA 63
Query: 210 VKLQIWDTAGQERFR----TITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA 377
V Q++ T GQ RFR + GI+ + D T +++ + + E +
Sbjct: 64 V--QLYGTPGQARFRFMWDLLANNLAADCAGIVFLVDNTRNYPMRDLRYYAQEFAELIAR 121
Query: 378 DVEKMILG-NKCDL-DSQRQVSKERG-EQLAIEYQIKFVE 488
+++I+G + DL D+ + ER E++ I+ ++F++
Sbjct: 122 --KRVIVGVTRSDLRDTPTLLEYERELEEIGIDAPVRFID 159
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 34.7 bits (76), Expect = 0.066
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 195 LDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENA 371
+DG V L++WDT G Y+ + I+L + + SF+++ W I++
Sbjct: 78 IDGVSVSLRLWDTFGDHSMN--RRFAYQNAHVIVLCFAINTPSSFKDVNAVWYPEIKKYC 135
Query: 372 SADVEKMILGNKCDLDSQRQVS 437
V +++G K D SQ VS
Sbjct: 136 PR-VPIILVGTKSDWRSQLNVS 156
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 34.7 bits (76), Expect = 0.066
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Frame = +3
Query: 39 KMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKL 218
K T + + ++G GVGK++ R F + + +++K ++++DG+ + L
Sbjct: 173 KSFMTNNRALSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYK-HSMEIDGQYLAL 231
Query: 219 QIWDTAGQ--------ERFRTIT----------TAYYRGSMG---IMLVYDVTNEKSFEN 335
+ DTAG+ R +T T R S L+Y T+++SF
Sbjct: 232 DVLDTAGKVSREARMSPRQKTKTGQLAPTGNSEEKLERASENTEIYFLLYSTTDKRSFTE 291
Query: 336 IKNWIRNIEENASADVEKM-ILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 503
+ + E + D + I+ K DL R+V + G LA Y F + S +
Sbjct: 292 AEEIAEYLFETKNIDPSTLTIVATKKDLVHMREVDEYEGRFLAQNYGCAFAQISISE 348
>SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8)
Length = 250
Score = 34.3 bits (75), Expect = 0.087
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 201 GKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVT-NEKSFENIKNWIRNIE 362
G + L WD AGQ + + S + V++ T E+ EN+++W+ NI+
Sbjct: 3 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIK 57
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 34.3 bits (75), Expect = 0.087
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 233
FK+ ++G S VGKTS++ + F I TI D+ I ++ DG + + DT
Sbjct: 188 FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 34.3 bits (75), Expect = 0.087
Identities = 24/99 (24%), Positives = 47/99 (47%)
Frame = +3
Query: 42 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 221
M + + L ++ + G +GVGKTSI+ RF F+ + T+ D + ++ +G + L
Sbjct: 1 MKEKRNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVE-DCYSKVLNKNGSIMVLN 59
Query: 222 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENI 338
D++G +F + + + G + E S E +
Sbjct: 60 TTDSSGSYQFPAMREVAIKRASGNKKDLEEQREVSSEQV 98
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Frame = +3
Query: 387 KMILGNKCDLDSQRQVSKER--GEQLAI--------EYQIKFVETSAKDSLNVEYAF 527
K GNK DL+ QR+VS E+ E +A + ++ VETSAKD N+ F
Sbjct: 78 KRASGNKKDLEEQREVSSEQVVKEVMAFAREKGCEGKLNMRQVETSAKDDCNISDVF 134
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 222 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMIL 398
I DT G + Y + +L +DVTN SFEN+ W I V M++
Sbjct: 77 IVDTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEI-RLYEKKVPLMLV 135
Query: 399 GNKCDLDSQRQVSKERGEQL 458
G K + +R+VSK E++
Sbjct: 136 GLKPNPVEKRKVSKADAERM 155
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 33.5 bits (73), Expect = 0.15
Identities = 33/135 (24%), Positives = 59/135 (43%)
Frame = +3
Query: 39 KMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKL 218
K A+ K+++ GD GKT + R FN +I T I D DG V
Sbjct: 217 KFARGVHYNMKIVIKGDRNTGKTCMFHRLHGKPFNEQYIPTNEIQE-----DDDGNAVL- 270
Query: 219 QIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL 398
AG F + Y+G+ G++++ D+T +F ++ + + + + ++L
Sbjct: 271 ----DAG---FVDV----YKGTHGVLMLLDITKPWTFTYVRRELPKVPPH----IPVLVL 315
Query: 399 GNKCDLDSQRQVSKE 443
N+ D++ R V E
Sbjct: 316 ANRRDMEEHRLVDAE 330
>SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 33.1 bits (72), Expect = 0.20
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Frame = +3
Query: 288 GIMLVYDV--TNEKSFENIKNWIRN--IEENASADVEKMILGNKCDLDSQRQVSKE--RG 449
G +++YDV TN K E+ + + + I + +I+ +KCD D+Q + +E R
Sbjct: 157 GFLVLYDVEATNAKRLEDTQEKVLSAVITYVQKSKRPFVIVASKCD-DTQLSLLQEVYRF 215
Query: 450 EQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI-KAKMEKK 569
Q + + VETS ++NV+ AF LA+ I K K+ +
Sbjct: 216 AQTK-KLNVPIVETSTYQNVNVDLAFVVLAQLIEKGKVRSR 255
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 462 IEYQIKFVETSAKDSLNVEYAFYTLAR 542
+++ + F+ETSAK LNV+ AF +AR
Sbjct: 148 MDHNVAFMETSAKTGLNVDLAFMAIAR 174
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 57 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIG 167
+ LFK+L++GD+ VGKTS + R+ + TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 195 LDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIK 341
+DG+ + L I DTAG+ ++T + +VY VT+ SF+ +
Sbjct: 10 VDGQFISLDIMDTAGKNSVEKMSTCLTFAEL-FFIVYSVTDRTSFDEAR 57
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +3
Query: 72 LLLIGDSGVGKTSILF----RFSEDAFNISF---ISTIGIDFKIRTIDLDGKKVKLQIWD 230
+L++G GKT++L +F + I F +T+G++ TI VKL WD
Sbjct: 24 ILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVGLNIGKITIS----HVKLMFWD 79
Query: 231 TAGQERFRTI 260
GQ+ RT+
Sbjct: 80 LGGQQELRTL 89
>SB_51083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1232
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 165 GIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYR 278
G+ IRT D+ + L++ + G+ER T+ A YR
Sbjct: 1157 GLHLNIRTADIVNLRTMLELLNVEGEERHVTLPYAIYR 1194
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKV 212
+++LIG GKTS+ F+ S +ST GI+ T ++D ++V
Sbjct: 292 RIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVDVEQV 339
>SB_41182| Best HMM Match : PAN (HMM E-Value=0.00063)
Length = 258
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 426 RQVSKERGEQLAIE--YQIKFVETS-AKDSLNVEYAFYTLARDIKAKMEKKQK 575
R+++ E +AIE ++++ V + A+D+ N + FY L R +K EK K
Sbjct: 204 RKLADEEIHSIAIEGVFRVEAVYSPYARDNKNPDNVFYKLIRSVKKSQEKSLK 256
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +3
Query: 378 DVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAK 557
+VEK+ NK D Q+QV +E+ EQ+ +++ + +E ++ F L ++
Sbjct: 146 EVEKLNNQNKALQDQQKQVEQEK-EQMRKDFEKRLIEEKERNVQGTMAEFGQLKVELAQS 204
Query: 558 MEKKQKEASNPSGGKEWRPQADAERRS 638
+E S + Q D+E S
Sbjct: 205 LEAHSSSQSEHLTLAQRVAQLDSENDS 231
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 66 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIG 167
+ ++++G +GVGKT+++ RF F + T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_2307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 525 FYTLARDIKAKMEKKQKEASNPSGGKEWRPQADAERR 635
F+ L++D+K+K EK K+ S P+G E + ++ R
Sbjct: 85 FFNLSKDVKSKYEK--KDTSQPNGWDELEREGNSADR 119
>SB_47450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 165 GIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYR 278
G+ IRT D+ + L++ D G+ER T+ + +R
Sbjct: 39 GLHLNIRTADIVNLRTMLELLDVEGEERHVTLPYSIHR 76
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 72 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 173
+LL+G GVGKT ++ + + D I +ST G D
Sbjct: 248 ILLVGAPGVGKTLLVHKATVDC-GIKLVSTNGTD 280
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 63 LFKLLLIGDSGVGKTSILFRFSEDAF 140
L+K++ G GVGKTS+ R ++ F
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKF 52
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 72 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 173
+LL+G GVGKT ++ + + D I +ST G D
Sbjct: 78 ILLVGAPGVGKTLLVHKATVDC-GIKLVSTNGTD 110
>SB_20875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 441 ERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLA 539
+ E LA + ++KF TS K+ LNV F L+
Sbjct: 2 DEAESLAKKLKLKFYRTSVKEDLNVNDVFMYLS 34
>SB_29630| Best HMM Match : Sigma54_activat (HMM E-Value=1)
Length = 1118
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 165 GIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYR 278
G+ IRT D+ + L++ D G+ER T+ +R
Sbjct: 500 GLHLNIRTADIVNLRTMLELLDVEGEERHVTLPYTIHR 537
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVK 215
+++LIG GKTS+ F+ +ST GI+ T ++D +VK
Sbjct: 361 RIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK 409
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 165 GIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYY 275
G F + T++ + +K IWD G ++ R + YY
Sbjct: 220 GAGFNVETVE--HRSLKFTIWDVGGLQKLRPLWRHYY 254
>SB_14584| Best HMM Match : IBV_3C (HMM E-Value=4.1)
Length = 311
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 525 FYTLARDIKAKMEKKQKEASNPSGGKE 605
F+ L++D+K+K EK K+ S P+G E
Sbjct: 282 FFNLSKDVKSKYEK--KDTSQPNGWDE 306
>SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -2
Query: 190 IVRILKSIPIVDIKEMLNASSENLNSIDVFPTPESPIRSNLNKQS*VFAIFTTI 29
+V + S+ IV + + + EN+ +++ TP+S ++ + KQ+ V AI T I
Sbjct: 47 LVDDVNSVKIVTGDVIHDFAGENVKYLELRSTPKSNPKTGMTKQAYVDAILTAI 100
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 69 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKV 212
+++LIG GKTS+ F+ +ST GI+ T ++D ++V
Sbjct: 83 RIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVDVEQV 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,637,729
Number of Sequences: 59808
Number of extensions: 364332
Number of successful extensions: 1143
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -