Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1265
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 373 e-104
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 372 e-103
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 372 e-103
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 366 e-101
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 363 e-101
03_01_0034 + 318432-318825,318902-319851 360 e-100
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 345 2e-95
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 339 1e-93
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 191 4e-49
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 188 5e-48
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 180 8e-46
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 150 9e-37
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 135 3e-32
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 33 0.17
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 33 0.22
10_01_0300 - 3257584-3258825 32 0.51
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 31 0.89
08_02_0235 + 14627648-14628889 31 0.89
08_01_0749 + 7063297-7064370 31 0.89
07_01_1086 - 9930311-9931993 31 0.89
05_03_0216 + 10370531-10371922,10378656-10378808 31 0.89
04_01_0187 - 2153546-2154520,2154581-2155858 31 0.89
09_04_0325 + 16689613-16689772,16690043-16690329 30 1.6
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 30 2.1
10_04_0010 - 7487455-7489490,7489569-7489980 30 2.1
03_02_1029 - 13488535-13493037 30 2.1
12_02_0046 + 12830974-12832386 24 4.3
03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669 25 4.3
04_04_0178 - 23337801-23337896,23337999-23338067,23338171-233382... 29 4.8
05_03_0624 - 16319364-16320581 28 6.3
05_03_0599 + 16026042-16027259 28 6.3
02_04_0648 - 24716249-24717841 28 6.3
02_02_0653 - 12655787-12656311 28 6.3
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 28 8.3
08_01_0146 + 1148535-1148577,1148650-1148918,1148924-1149409,114... 28 8.3
03_01_0524 + 3943581-3943610,3943889-3944050,3944403-3944637,394... 28 8.3
01_06_0866 - 32572002-32572541,32572806-32572984,32574330-325744... 28 8.3
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 373 bits (917), Expect = e-104
Identities = 171/212 (80%), Positives = 182/212 (85%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREI+HIQ GQCGNQIGAKFWE+I DEHG+D TG Y GDSDLQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 372 bits (915), Expect = e-103
Identities = 171/212 (80%), Positives = 182/212 (85%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDSDLQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 372 bits (914), Expect = e-103
Identities = 171/212 (80%), Positives = 182/212 (85%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDSDLQLERINVYYNEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 366 bits (900), Expect = e-101
Identities = 166/213 (77%), Positives = 182/213 (85%)
Frame = +3
Query: 66 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKY 245
KMREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SDLQLER+NVYYNEAS G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 246 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 425
VPRA+L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV
Sbjct: 240 VPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 299
Query: 426 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 605
VRKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 300 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 359
Query: 606 VEPYNATLSVHQLVENTDETYCIDNEALYDICF 704
VEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 360 VEPYNATLSVHQLVENADECMVLDNEALYDICF 392
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 363 bits (894), Expect = e-101
Identities = 165/212 (77%), Positives = 181/212 (85%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 360 bits (885), Expect = e-100
Identities = 164/212 (77%), Positives = 179/212 (84%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y GDSDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+L+DLEPGTMDSVRSGP+G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 345 bits (849), Expect = 2e-95
Identities = 166/233 (71%), Positives = 182/233 (78%), Gaps = 21/233 (9%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREI+HIQ GQCGNQIGAKFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 429 RKEAESCDCLQ---------------------GFQXXXXXXXXXXXXXXXXXXXKIREEY 545
RKEAE+CDCLQ GFQ KIREEY
Sbjct: 121 RKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGMGTLLISKIREEY 180
Query: 546 PDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 704
PDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 181 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 233
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 339 bits (833), Expect = 1e-93
Identities = 163/228 (71%), Positives = 177/228 (77%), Gaps = 16/228 (7%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREI+HIQ GQCGNQIGAKFWE+I EHG+DPTG Y G S QLERINVY+NEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+L+DLEPGTMDS+RSGP G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 429 RKEAESCDCLQ----------------GFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 560
RKEAE+CDCLQ GFQ KIREEYPDR+M
Sbjct: 121 RKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 180
Query: 561 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 704
T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 181 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 228
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 191 bits (466), Expect = 4e-49
Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 242
MREI+ I GQ G Q+G WE+ EHGI+P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 243 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 422
+VPRAI VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 423 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 602
VRK A++C LQGF ++ +Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 603 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 701
VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 188 bits (457), Expect = 5e-48
Identities = 90/213 (42%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 242
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 243 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 422
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 423 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 602
+RK A++C LQGF ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 603 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 701
VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 180 bits (439), Expect = 8e-46
Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 2/213 (0%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 242
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 243 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 422
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 423 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 602
+RK A++C LQGF ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 603 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 701
VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 150 bits (364), Expect = 9e-37
Identities = 74/209 (35%), Positives = 119/209 (56%), Gaps = 3/209 (1%)
Frame = +3
Query: 72 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 251
REI+ IQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 252 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 425
RA+LVDLEP ++ +++ + ++ +N + GAGNNWA G Y +G ++VD ++D+
Sbjct: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
Query: 426 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVSDT 602
+ +EA+ D L+GF + + Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 603 VVEPYNATLSVHQLVENTDETYCIDNEAL 689
VV+PYN+ L++ +L N D +DN AL
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTAL 210
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 135 bits (327), Expect = 3e-32
Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 21/188 (11%)
Frame = +3
Query: 201 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 380
+ N +++E S GK+VPRA+ VDLEP +D V++GP+ Q+F P+ + + A NN+A+G
Sbjct: 107 DAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARG 166
Query: 381 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 560
HYT G E+VD LD +RK A++C LQGF ++ +Y +
Sbjct: 167 HYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSK 226
Query: 561 NTYSVVPSP---------------------KVSDTVVEPYNATLSVHQLVENTDETYCID 677
+++ PSP K+S VVEPYN+ LS H L+E+TD +D
Sbjct: 227 LGFTIYPSPQYFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEHTDVVVLLD 286
Query: 678 NEALYDIC 701
NEA+YDIC
Sbjct: 287 NEAIYDIC 294
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS 188
MREI+ I GQ G Q+G WE+ EHGI P G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q +KFW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q +KFW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>10_01_0300 - 3257584-3258825
Length = 413
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 289 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 326
>08_02_0235 + 14627648-14628889
Length = 413
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 158
>08_01_0749 + 7063297-7064370
Length = 357
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q +KFW+ + E G ++ + AYH +D Q ER+N
Sbjct: 65 GSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERVN 102
>07_01_1086 - 9930311-9931993
Length = 560
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 268 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 305
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 254 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 291
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 504 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 541
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +3
Query: 321 FRPDNFVFGQSGAGN-NWA 374
F PDNFVF QS AG NWA
Sbjct: 129 FNPDNFVFHQSVAGGINWA 147
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 406 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 443
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 568 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 605
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 212
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 1208 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 1245
>12_02_0046 + 12830974-12832386
Length = 470
Score = 24.2 bits (50), Expect(2) = 4.3
Identities = 12/43 (27%), Positives = 14/43 (32%)
Frame = -1
Query: 399 QHPPCSVPWPSCYXXXXXXXRSCPDGRSVRKVQSGQSPWCRAP 271
+ P VP P C + P R S PWC P
Sbjct: 275 KRPAPPVPSPPCAKKIRGPVSASPAARQSCVAASAPPPWCVPP 317
Score = 23.0 bits (47), Expect(2) = 4.3
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = -1
Query: 519 GGCPYRNRCRRRASVSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVP 376
GG ++ R++ V+ P P P L+ A PP VP
Sbjct: 217 GGSVPASKATRQSCVTASAPPPRRVAPQPAPPSLRTAPAAVAPPRQVP 264
>03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669
Length = 457
Score = 24.6 bits (51), Expect(2) = 4.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 528 WR*GGCPYRNRCR 490
W G CPY RCR
Sbjct: 391 WERGACPYGARCR 403
Score = 22.6 bits (46), Expect(2) = 4.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 516 GCPYRNRCRRRAS 478
GCPY +RC R S
Sbjct: 433 GCPYGHRCHFRHS 445
>04_04_0178 -
23337801-23337896,23337999-23338067,23338171-23338253,
23338694-23338772,23338956-23339120,23339230-23339274,
23339370-23339444,23340135-23340311,23340398-23340721,
23340829-23340897
Length = 393
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -2
Query: 263 EDGAGHVLAAGGFIVVYIDALQLQVRVPMVSTGGVDAVLVGDDL 132
E G +A G IVV L + V GV AVLVG+ L
Sbjct: 326 EGERGQTIAQKGIIVVGESGLFTPDHISFVQNAGVKAVLVGESL 369
>05_03_0624 - 16319364-16320581
Length = 405
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +3
Query: 201 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 377
ER+ V + G ++P +IL L P S P FRP + + W K
Sbjct: 185 ERLRVADDGGGGSAFLPPSILPSLLPAPRCSTPLSPSSPPFRPSRVIVRWARPPPGWCK 243
>05_03_0599 + 16026042-16027259
Length = 405
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +3
Query: 201 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 377
ER+ V + G ++P +IL L P S P FRP + + W K
Sbjct: 185 ERLRVADDGGGGSAFLPPSILPSLLPAPRCSTPLSPSSPPFRPSRVIVRWARPPPGWCK 243
>02_04_0648 - 24716249-24717841
Length = 530
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 117 GAKFWEIISDEHGIDPTGAYHG 182
G +++E++ DEHGI+P ++G
Sbjct: 366 GLRYFELMCDEHGIEPEIEHYG 387
>02_02_0653 - 12655787-12656311
Length = 174
Score = 28.3 bits (60), Expect = 6.3
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 426 RRLKLNRRAQHPPCSVPW 373
R + ++ QHPPC++PW
Sbjct: 10 RSIAQQQQQQHPPCNLPW 27
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGI-DPTGAYHGDSDLQLERINVYYN-EASGG- 239
MRE V +Q G N +G+ FW + G+ D A + L+ +Y + E G
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNAALDMDVLYRSGETHQGV 60
Query: 240 -KYVPRAILVD 269
Y PR + VD
Sbjct: 61 ATYCPRLVSVD 71
>08_01_0146 +
1148535-1148577,1148650-1148918,1148924-1149409,
1149543-1149905
Length = 386
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 500 FRYGHPPHLQNQRRVP*QNNEHIFSCTI 583
+R+G PPHLQ+ + H F+ ++
Sbjct: 54 YRHGEPPHLQDMEKAKLAAANHFFAASV 81
>03_01_0524 +
3943581-3943610,3943889-3944050,3944403-3944637,
3945626-3945666,3946101-3946145,3947119-3947246,
3947446-3947554,3947641-3947694
Length = 267
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 297 RSGPFGQIFRPDNFVFGQSGAGNNWAKGH 383
++ P+ + +++ +G SGAGN ++ GH
Sbjct: 64 QANPYWAMMHTNSYKYGYSGAGNYYSYGH 92
>01_06_0866 - 32572002-32572541,32572806-32572984,32574330-32574430,
32574554-32574887,32574915-32575037,32575193-32575394,
32575915-32576097,32576332-32576436,32576553-32576760,
32577025-32577170,32577321-32577443,32577490-32577698,
32577931-32578152,32578189-32578198,32578710-32578763,
32580841-32581052,32581620-32581772,32582071-32582158,
32582192-32582290,32582660-32582907,32584806-32585049
Length = 1260
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -2
Query: 410 IDELSTLRVVSLGPVVTGAGLSEDEVVRTEDLSERSRA--DRVHGAGLQVDEDGAGHVL 240
+D ++ PV TG L+ + L R A + GAG+ +D+DG G L
Sbjct: 1040 VDSSRAAQLAPANPVSTGGKLARSDDYHRRFLFARIGALDSMIMGAGIALDDDGHGDCL 1098
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,311,651
Number of Sequences: 37544
Number of extensions: 408193
Number of successful extensions: 1275
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -