Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1265
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 398 e-111
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 388 e-108
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 384 e-107
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 384 e-107
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 380 e-106
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 380 e-106
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 268 3e-72
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 268 3e-72
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 188 4e-48
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 186 2e-47
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 186 2e-47
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 186 2e-47
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 184 7e-47
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 181 4e-46
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 181 4e-46
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 180 9e-46
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 180 9e-46
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 180 9e-46
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 180 9e-46
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 179 2e-45
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 179 2e-45
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 178 4e-45
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 175 3e-44
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 157 5e-39
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 146 2e-35
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 146 2e-35
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical p... 28 5.7
Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical p... 28 5.7
Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 28 5.7
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 7.5
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 27 9.9
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 27 9.9
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 27 9.9
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 27 9.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 398 bits (980), Expect = e-111
Identities = 184/212 (86%), Positives = 191/212 (90%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAESCDCLQGFQ KIREEYPDRIM T+SVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVENTDET+CIDNEALYDICF
Sbjct: 181 EPYNATLSVHQLVENTDETFCIDNEALYDICF 212
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 388 bits (956), Expect = e-108
Identities = 177/212 (83%), Positives = 188/212 (88%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAE CDCLQGFQ KIREEYPDRIM+++SVVPSPKVSDTVV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVENTDET+CIDNEALYDICF
Sbjct: 181 EPYNATLSVHQLVENTDETFCIDNEALYDICF 212
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 384 bits (945), Expect = e-107
Identities = 177/212 (83%), Positives = 186/212 (87%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAES DCLQGFQ KIREEYPDRIMNT+SVVPSPKVSDTVV
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVENTD T+CIDNEALYDICF
Sbjct: 181 EPYNATLSVHQLVENTDSTFCIDNEALYDICF 212
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 384 bits (945), Expect = e-107
Identities = 177/212 (83%), Positives = 186/212 (87%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAES DCLQGFQ KIREEYPDRIMNT+SVVPSPKVSDTVV
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVENTD T+CIDNEALYDICF
Sbjct: 181 EPYNATLSVHQLVENTDSTFCIDNEALYDICF 212
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 380 bits (935), Expect = e-106
Identities = 171/212 (80%), Positives = 187/212 (88%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAE CDCLQGFQ KIREEYPDRIM+++SVVPSPKVSDTVV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVENTDETYCIDNEALYDIC+
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICY 212
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 380 bits (934), Expect = e-106
Identities = 171/212 (80%), Positives = 187/212 (88%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RKEAE CDCLQGFQ KIREE+PDRIM+++SVVPSPKVSDTVV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDICF 704
EPYNATLSVHQLVENTDETYCIDNEALYDIC+
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICY 212
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 268 bits (657), Expect = 3e-72
Identities = 119/211 (56%), Positives = 156/211 (73%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
R+EAE+ D L+GFQ K+REEY D+ ++T S++PS KVSDTVV
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDIC 701
EPYNA LS+ L++N DE +CIDNEA++DIC
Sbjct: 181 EPYNAILSMPHLMDNCDENFCIDNEAIFDIC 211
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 268 bits (657), Expect = 3e-72
Identities = 119/211 (56%), Positives = 156/211 (73%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
R+EAE+ D L+GFQ K+REEY D+ ++T S++PS KVSDTVV
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDIC 701
EPYNA LS+ L++N DE +CIDNEA++DIC
Sbjct: 181 EPYNAILSMPHLMDNCDENFCIDNEAIFDIC 211
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 188 bits (457), Expect = 4e-48
Identities = 83/211 (39%), Positives = 125/211 (59%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
R+ A++C LQGF ++ +Y + +S+ P+P+VS VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDIC 701
EPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 186 bits (452), Expect = 2e-47
Identities = 83/211 (39%), Positives = 126/211 (59%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
R+ A++C LQGF ++ +Y + +S+ P+P+VS VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDIC 701
EPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 186 bits (452), Expect = 2e-47
Identities = 82/211 (38%), Positives = 124/211 (58%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
R+ A++C LQGF ++ +Y + +S+ P+P+V VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDIC 701
EPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 186 bits (452), Expect = 2e-47
Identities = 83/211 (39%), Positives = 126/211 (59%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
R+ A++C LQGF ++ +Y + +S+ P+P+VS VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDIC 701
EPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 184 bits (447), Expect = 7e-47
Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 1/211 (0%)
Frame = +3
Query: 72 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 248
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
RK+ E+C+ LQGF ++ E+ + +SV P+P+VS +VV
Sbjct: 126 RKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVV 185
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDIC 701
EPYN+ L+ H +E +D ++ +DNEA+YD+C
Sbjct: 186 EPYNSILTTHTTLELSDCSFMVDNEAIYDLC 216
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 181 bits (441), Expect = 4e-46
Identities = 80/211 (37%), Positives = 124/211 (58%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
R+ A++C LQGF ++ +Y + +S+ P+P+VS VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDIC 701
EPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 181 bits (441), Expect = 4e-46
Identities = 80/211 (37%), Positives = 124/211 (58%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
R+ A++C LQGF ++ +Y + +S+ P+P+VS VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDIC 701
EPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 180 bits (438), Expect = 9e-46
Identities = 85/213 (39%), Positives = 128/213 (60%), Gaps = 3/213 (1%)
Frame = +3
Query: 72 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 242
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 243 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 422
+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 423 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 602
V++ AE+C+ LQGF ++ EY + +++ P+P+VS +
Sbjct: 127 RVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTS 186
Query: 603 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 701
+VEPYN+ L H +E++D T+ +DNEA+YDIC
Sbjct: 187 MVEPYNSILMTHTTLEHSDCTFMVDNEAIYDIC 219
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 180 bits (438), Expect = 9e-46
Identities = 81/213 (38%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 242
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 243 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 422
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 423 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 602
+R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 603 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 701
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 213
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 180 bits (438), Expect = 9e-46
Identities = 81/213 (38%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 242
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 243 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 422
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 423 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 602
+R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 603 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 701
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 213
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 180 bits (438), Expect = 9e-46
Identities = 81/213 (38%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 242
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 243 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 422
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 423 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 602
+R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 603 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 701
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 213
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 179 bits (435), Expect = 2e-45
Identities = 85/212 (40%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 242
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 243 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 422
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 423 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 602
VR+ E C LQGF ++ +Y + +S+ P+P++S +
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 603 VVEPYNATLSVHQLVENTDETYCIDNEALYDI 698
+VEPYN+ L+ H +E++D ++ +DNEA+Y+I
Sbjct: 181 MVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEI 212
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 179 bits (435), Expect = 2e-45
Identities = 81/215 (37%), Positives = 129/215 (60%), Gaps = 2/215 (0%)
Frame = +3
Query: 63 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASG 236
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 237 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
GK+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 417 LDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 596
+D VR+ E+C LQGF ++ +Y + + + P+P+VS
Sbjct: 124 MDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVS 183
Query: 597 DTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 701
++VEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 184 TSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 218
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 178 bits (433), Expect = 4e-45
Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 2/212 (0%)
Frame = +3
Query: 72 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 245
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 246 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 425
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 426 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 605
+R+ A++C LQGF ++ +Y + +S+ P+P+VS V
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 606 VEPYNATLSVHQLVENTDETYCIDNEALYDIC 701
VEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 181 VEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 212
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 175 bits (425), Expect = 3e-44
Identities = 79/211 (37%), Positives = 127/211 (60%)
Frame = +3
Query: 69 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 248
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 249 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 608
R+ A +C+ LQGF ++ EY + +S+ P+P++S +VV
Sbjct: 120 RRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVV 179
Query: 609 EPYNATLSVHQLVENTDETYCIDNEALYDIC 701
EPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 180 EPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 210
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 157 bits (382), Expect = 5e-39
Identities = 74/188 (39%), Positives = 114/188 (60%), Gaps = 3/188 (1%)
Frame = +3
Query: 147 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 317
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 318 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXX 497
+F P+ + G+ A N +A+G YT G E++D V+D V++ AE+C+ LQGF
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGT 123
Query: 498 XXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 677
++ EY + +++ P+P+VS ++VEPYN+ L H +E++D T+ +D
Sbjct: 124 GSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVD 183
Query: 678 NEALYDIC 701
NEA+YDIC
Sbjct: 184 NEAIYDIC 191
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 146 bits (353), Expect = 2e-35
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 4/209 (1%)
Frame = +3
Query: 78 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 257
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 258 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 428
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS-DTV 605
+EAE+ + L G ++RE +P +++ TYSV + S D V
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVV 184
Query: 606 VEPYNATLSVHQLVENTDETYCIDNEALY 692
V PYN LS+ +L+EN D +DN AL+
Sbjct: 185 VHPYNWVLSMQRLIENPDHVVVLDNAALH 213
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 146 bits (353), Expect = 2e-35
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 4/209 (1%)
Frame = +3
Query: 78 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 257
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 258 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 428
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 429 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS-DTV 605
+EAE+ + L G ++RE +P +++ TYSV + S D V
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVV 184
Query: 606 VEPYNATLSVHQLVENTDETYCIDNEALY 692
V PYN LS+ +L+EN D +DN AL+
Sbjct: 185 VHPYNWVLSMQRLIENPDHVVVLDNAALH 213
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -3
Query: 451 SHDSASFRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTES 287
S A R + + S SS+PS CP LL PAP P + G PK +
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVP 353
Query: 286 MVPGSKST 263
PG+ T
Sbjct: 354 EPPGNMKT 361
>Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 510 PYRNRCRRRASVSVGIPGGNHTIPLPF 430
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 510 PYRNRCRRRASVSVGIPGGNHTIPLPF 430
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 510 PYRNRCRRRASVSVGIPGGNHTIPLPF 430
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 510 PYRNRCRRRASVSVGIPGGNHTIPLPF 430
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = -1
Query: 483 ASVSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSCYXXXXXXXRSCPDGRSVRKV 304
+S P T+P P+ + A +PP S P+PS + P
Sbjct: 165 SSTPTPYPSSQPTMPTPYPTG---SGAAPYPPSSTPYPSAGAMGYNPYMNVPQSTPYPMG 221
Query: 303 QSGQSPWCRAPS 268
SG SP+ A S
Sbjct: 222 ASGASPYPSASS 233
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 135 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 272
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 464 IPTDTLARRRH--RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHSSRTVQRHTFSS 637
+PT + H + YG PP + VP + C++ ++ H SRT RH ++
Sbjct: 529 VPTSSQENLNHGRMYGYGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRT--RHATAA 586
Query: 638 SIS*KH 655
+H
Sbjct: 587 LDQLRH 592
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 464 IPTDTLARRRH--RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHSSRTVQRHTFSS 637
+PT + H + YG PP + VP + C++ ++ H SRT RH ++
Sbjct: 542 VPTSSQENLNHGRMYGYGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRT--RHATAA 599
Query: 638 SIS*KH 655
+H
Sbjct: 600 LDQLRH 605
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 464 IPTDTLARRRH--RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHSSRTVQRHTFSS 637
+PT + H + YG PP + VP + C++ ++ H SRT RH ++
Sbjct: 541 VPTSSQENLNHGRMYGYGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRT--RHATAA 598
Query: 638 SIS*KH 655
+H
Sbjct: 599 LDQLRH 604
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 464 IPTDTLARRRH--RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHSSRTVQRHTFSS 637
+PT + H + YG PP + VP + C++ ++ H SRT RH ++
Sbjct: 544 VPTSSQENLNHGRMYGYGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRT--RHATAA 601
Query: 638 SIS*KH 655
+H
Sbjct: 602 LDQLRH 607
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,912,138
Number of Sequences: 27780
Number of extensions: 308883
Number of successful extensions: 935
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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