Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1264
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064608-1|AAH64608.1| 311|Homo sapiens mediator complex subuni... 116 6e-26
AL713892-2|CAI17283.2| 311|Homo sapiens cofactor required for S... 116 6e-26
AL603649-2|CAH72529.2| 311|Homo sapiens cofactor required for S... 116 6e-26
AL513102-2|CAH72546.2| 311|Homo sapiens cofactor required for S... 116 6e-26
AL160271-7|CAI13386.2| 311|Homo sapiens cofactor required for S... 116 6e-26
AF104252-1|AAD12721.1| 273|Homo sapiens transcriptional co-acti... 93 8e-19
BC119723-1|AAI19724.1| 168|Homo sapiens LOC441089 protein protein. 88 2e-17
BC119722-1|AAI19723.1| 168|Homo sapiens LOC441089 protein protein. 88 2e-17
AF230382-1|AAF37290.1| 273|Homo sapiens p37 TRAP/SMCC/PC2 subun... 88 3e-17
AL713892-1|CAI17284.1| 237|Homo sapiens cofactor required for S... 84 5e-16
AL603649-1|CAH72530.1| 237|Homo sapiens cofactor required for S... 84 5e-16
AL513102-1|CAH72547.1| 237|Homo sapiens cofactor required for S... 84 5e-16
AL160271-6|CAI13387.1| 237|Homo sapiens cofactor required for S... 84 5e-16
DQ099387-1|AAZ13763.1| 237|Homo sapiens cofactor required for S... 83 7e-16
>BC064608-1|AAH64608.1| 311|Homo sapiens mediator complex subunit
27 protein.
Length = 311
Score = 116 bits (280), Expect = 6e-26
Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 3/191 (1%)
Frame = +2
Query: 101 EQLNSALNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLE 277
E + A+++++ LRSSVS VF+ L +G+R +G+EK F +LE
Sbjct: 12 EAFSQAISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELE 71
Query: 278 QTVSGLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQN 457
+ + + P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q
Sbjct: 72 RLSNLVGKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQ 131
Query: 458 SLKRSYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQ 631
SLKRS G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++
Sbjct: 132 SLKRSANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLL 191
Query: 632 INLSHVLKAVV 664
+ L VLK +V
Sbjct: 192 VTLGKVLKVIV 202
>AL713892-2|CAI17283.2| 311|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 311
Score = 116 bits (280), Expect = 6e-26
Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 3/191 (1%)
Frame = +2
Query: 101 EQLNSALNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLE 277
E + A+++++ LRSSVS VF+ L +G+R +G+EK F +LE
Sbjct: 12 EAFSQAISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELE 71
Query: 278 QTVSGLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQN 457
+ + + P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q
Sbjct: 72 RLSNLVGKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQ 131
Query: 458 SLKRSYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQ 631
SLKRS G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++
Sbjct: 132 SLKRSANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLL 191
Query: 632 INLSHVLKAVV 664
+ L VLK +V
Sbjct: 192 VTLGKVLKVIV 202
>AL603649-2|CAH72529.2| 311|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 311
Score = 116 bits (280), Expect = 6e-26
Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 3/191 (1%)
Frame = +2
Query: 101 EQLNSALNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLE 277
E + A+++++ LRSSVS VF+ L +G+R +G+EK F +LE
Sbjct: 12 EAFSQAISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELE 71
Query: 278 QTVSGLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQN 457
+ + + P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q
Sbjct: 72 RLSNLVGKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQ 131
Query: 458 SLKRSYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQ 631
SLKRS G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++
Sbjct: 132 SLKRSANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLL 191
Query: 632 INLSHVLKAVV 664
+ L VLK +V
Sbjct: 192 VTLGKVLKVIV 202
>AL513102-2|CAH72546.2| 311|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 311
Score = 116 bits (280), Expect = 6e-26
Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 3/191 (1%)
Frame = +2
Query: 101 EQLNSALNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLE 277
E + A+++++ LRSSVS VF+ L +G+R +G+EK F +LE
Sbjct: 12 EAFSQAISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELE 71
Query: 278 QTVSGLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQN 457
+ + + P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q
Sbjct: 72 RLSNLVGKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQ 131
Query: 458 SLKRSYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQ 631
SLKRS G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++
Sbjct: 132 SLKRSANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLL 191
Query: 632 INLSHVLKAVV 664
+ L VLK +V
Sbjct: 192 VTLGKVLKVIV 202
>AL160271-7|CAI13386.2| 311|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 311
Score = 116 bits (280), Expect = 6e-26
Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 3/191 (1%)
Frame = +2
Query: 101 EQLNSALNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLE 277
E + A+++++ LRSSVS VF+ L +G+R +G+EK F +LE
Sbjct: 12 EAFSQAISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELE 71
Query: 278 QTVSGLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQN 457
+ + + P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q
Sbjct: 72 RLSNLVGKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQ 131
Query: 458 SLKRSYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQ 631
SLKRS G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++
Sbjct: 132 SLKRSANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLL 191
Query: 632 INLSHVLKAVV 664
+ L VLK +V
Sbjct: 192 VTLGKVLKVIV 202
>AF104252-1|AAD12721.1| 273|Homo sapiens transcriptional
co-activator CRSP34 protein.
Length = 273
Score = 93.1 bits (221), Expect = 8e-19
Identities = 54/127 (42%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Frame = +2
Query: 290 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 469
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSSDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 470 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINLS 643
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ + L
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLVTLG 157
Query: 644 HVLKAVV 664
VLK +V
Sbjct: 158 KVLKVIV 164
>BC119723-1|AAI19724.1| 168|Homo sapiens LOC441089 protein protein.
Length = 168
Score = 88.2 bits (209), Expect = 2e-17
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Frame = +2
Query: 101 EQLNSALNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLE 277
E + A+++++ LRSSVS VF+ L +G+R +G+EK F +LE
Sbjct: 12 EAFSQAISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELE 71
Query: 278 QTVSGLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQN 457
+ + + P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q
Sbjct: 72 RLSNLVGKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQ 131
Query: 458 SLKRSYINSG-STKRRGKLQSNHNVAPIQ-VDNVIN 559
SLKRS G S KRR K Q V P Q VD+VI+
Sbjct: 132 SLKRSANQMGVSAKRRPKAQPTTLVLPPQYVDDVIS 167
>BC119722-1|AAI19723.1| 168|Homo sapiens LOC441089 protein protein.
Length = 168
Score = 88.2 bits (209), Expect = 2e-17
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Frame = +2
Query: 101 EQLNSALNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLE 277
E + A+++++ LRSSVS VF+ L +G+R +G+EK F +LE
Sbjct: 12 EAFSQAISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELE 71
Query: 278 QTVSGLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQN 457
+ + + P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q
Sbjct: 72 RLSNLVGKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQ 131
Query: 458 SLKRSYINSG-STKRRGKLQSNHNVAPIQ-VDNVIN 559
SLKRS G S KRR K Q V P Q VD+VI+
Sbjct: 132 SLKRSANQMGVSAKRRPKAQPTTLVLPPQYVDDVIS 167
>AF230382-1|AAF37290.1| 273|Homo sapiens p37 TRAP/SMCC/PC2 subunit
protein.
Length = 273
Score = 87.8 bits (208), Expect = 3e-17
Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
Frame = +2
Query: 290 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 469
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 470 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINLS 643
S G S KR K Q V P Q VD+VI+ IDR + +M I +SRP ++ ++ + L
Sbjct: 98 SANQMGVSAKRXPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSXMLLVTLG 157
Query: 644 HVLKAVV 664
VLK +V
Sbjct: 158 KVLKVIV 164
>AL713892-1|CAI17284.1| 237|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 237
Score = 83.8 bits (198), Expect = 5e-16
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +2
Query: 290 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 469
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 470 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINL 640
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ +++
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLLDI 156
>AL603649-1|CAH72530.1| 237|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 237
Score = 83.8 bits (198), Expect = 5e-16
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +2
Query: 290 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 469
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 470 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINL 640
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ +++
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLLDI 156
>AL513102-1|CAH72547.1| 237|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 237
Score = 83.8 bits (198), Expect = 5e-16
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +2
Query: 290 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 469
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 470 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINL 640
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ +++
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLLDI 156
>AL160271-6|CAI13387.1| 237|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 237
Score = 83.8 bits (198), Expect = 5e-16
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +2
Query: 290 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 469
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 470 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINL 640
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ +++
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLLDI 156
>DQ099387-1|AAZ13763.1| 237|Homo sapiens cofactor required for Sp1
transcriptional activation subunit 8 34kDa protein.
Length = 237
Score = 83.4 bits (197), Expect = 7e-16
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +2
Query: 290 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 469
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GEPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 470 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINL 640
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ +++
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLLDI 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,941,141
Number of Sequences: 237096
Number of extensions: 1467232
Number of successful extensions: 2876
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2857
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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