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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1262
         (633 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3 |Schi...    40   4e-04
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces...    40   4e-04
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc...    37   0.002
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom...    35   0.011
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ...    34   0.015
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch...    33   0.026
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch...    32   0.060
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch...    32   0.079
SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces pomb...    31   0.18 
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces...    30   0.32 
SPAC23A1.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ...    28   0.97 
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar...    28   1.3  
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p...    27   2.3  
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa...    26   3.9  
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc...    26   5.2  
SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit 1|Schizosacchar...    26   5.2  
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar...    26   5.2  
SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8 |Schizos...    26   5.2  
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S...    25   6.9  
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B...    25   6.9  
SPAC343.18 |rfp2||ubiquitin-protein ligase E3 Rfp2|Schizosacchar...    25   6.9  
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb...    25   6.9  
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c...    25   9.1  
SPAC227.09 |||folylpolyglutamate synthase|Schizosaccharomyces po...    25   9.1  
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|...    25   9.1  

>SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 306

 Score = 39.5 bits (88), Expect = 4e-04
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 450 KKHLDQLKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQCCYG 587
           ++ L+   ++P   +  + C  C+E I  P   +CGHIFC  C  G
Sbjct: 237 ERDLEDKNKLPFIPEGNRKCSLCMEFIHCPAATECGHIFCWSCING 282


>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 486

 Score = 39.5 bits (88), Expect = 4e-04
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
 Frame = +3

Query: 303 PLQIGKNLTGIDYVHVRPAATASYAHLNLLGYITLLHAFVCCGQSVYLAKKHLDQLKEIP 482
           PL++ + +   D +   P  T++   + LL      H  +    S   A      ++++ 
Sbjct: 102 PLELKEEICHDDCLSSSPPCTSALTEITLLP--PTFHNLIPSSSSYETAVAEFLHMEDLL 159

Query: 483 NE-VDNEKTCVACLEEILQPCVLQCGHIFCHQCCYGAL 593
            E V  E  C  C   +  P V  CGH FC  C   AL
Sbjct: 160 QENVSRELECQICFGMLYDPVVSPCGHTFCGPCLMQAL 197


>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 732

 Score = 37.1 bits (82), Expect = 0.002
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 459 LDQLKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQC 578
           +D  KE  +E  +E+ C  C E I   CVL C H  CH C
Sbjct: 67  VDASKEEQDE--DEQICFICAEGITYSCVLPCNHRMCHVC 104


>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1375

 Score = 34.7 bits (76), Expect = 0.011
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +3

Query: 450  KKHLDQLKE-IPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQCCYGALK--TVVHWCRT 620
            +++L  L E I  + ++ + C+ C + I Q  +  CGH++C  C    LK  +    C+T
Sbjct: 1072 RRYLTNLYEHIVLKAESHQICIICRDIIKQGFITTCGHLYCSFCLEAWLKHSSSCPMCKT 1131

Query: 621  PFTK 632
               K
Sbjct: 1132 KLNK 1135


>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 468

 Score = 34.3 bits (75), Expect = 0.015
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +3

Query: 468 LKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQCCYGALK 596
           L E   ++     C  C E + +P    CGH +C++C    LK
Sbjct: 72  LLETFQKIKKTLECPICTEALQRPFTTHCGHTYCYECLLNWLK 114


>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 269

 Score = 33.5 bits (73), Expect = 0.026
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +3

Query: 507 CVACLEEILQPCVLQCGHIFCHQCCYGALKTVVHWCRTP 623
           CV CL+         CGHIFC+ C   AL T     + P
Sbjct: 206 CVICLDSPENLSCTPCGHIFCNFCILSALGTTAATQKCP 244


>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1133

 Score = 32.3 bits (70), Expect = 0.060
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
 Frame = +3

Query: 402  TLLHAFVCCGQSVYLAKKHLDQLKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQCC 581
            +L++ FV  G+ +      +D LK     +     C  C E I  P +L C H  C  C 
Sbjct: 845  SLINQFVVTGKPIPSDILKIDTLKSFEALITECPIC--CNEPIQNPLLLNCKHACCGDCL 902

Query: 582  -----YGALKTVV----HWCRTPFTK 632
                 Y   + ++    H CR PF +
Sbjct: 903  SEHIQYQKRRNIIPPLCHTCRQPFNE 928


>SPBC13E7.02 |cwf24||GCN5-related N
           acetyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 533

 Score = 31.9 bits (69), Expect = 0.079
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 507 CVACLEEILQPCVLQCGHIFCHQC 578
           C+ C ++   P    CGH FC QC
Sbjct: 254 CLICKKDYRSPIATTCGHHFCEQC 277


>SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 387

 Score = 30.7 bits (66), Expect = 0.18
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
 Frame = +3

Query: 489 VDNEKTCVACLEEILQPCVLQCGHIFCHQCCYGALK--TVVHWCRTP 623
           +D+   C+ C E    P +  C H FC  C    L+   +   CR P
Sbjct: 23  LDSSLRCLICHEYFRAPLITSCSHTFCSFCIRDYLREHPMCPACRAP 69


>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 456

 Score = 29.9 bits (64), Expect = 0.32
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 507 CVACLEEILQPCVLQCGHIFCHQCCYGALKTVVHWC 614
           C  C     +P  L C H+FC  C     K  V +C
Sbjct: 360 CAICSNVAYKPVRLGCSHVFCLHCLIILQKQKVDFC 395


>SPAC23A1.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 251

 Score = 28.3 bits (60), Expect = 0.97
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = +3

Query: 477 IPNEVDNEKTCVACLEE---ILQPCVLQCGHIFCHQCCYGALKTV 602
           +P E      CV   +E   I  P    CGH +C+ C    LK V
Sbjct: 185 VPQECGLCMMCVQRGDERVAITTPYTTDCGHTYCYACIMSRLKLV 229


>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 559

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -1

Query: 483 WEFLLIGPNVFSLSKHFVRSIQMHAVMLCSLVNL--NEHMKQLQQV*HEHNQCQSDFYLS 310
           W+ +   PN F  ++ F+R +  H +  C   +   N   ++ Q     H +C  D++LS
Sbjct: 452 WQIMDQFPNCFEFNERFLRRLLYH-LYSCQYGSFLYNSERERAQASVSTHTRCIWDYFLS 510

Query: 309 VK 304
            K
Sbjct: 511 RK 512


>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 673

 Score = 27.1 bits (57), Expect = 2.3
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 507 CVACLEEI-LQPCVLQCGHIFCHQCCYGALKT 599
           C  CLEE  +   + +CGH++C  C    ++T
Sbjct: 214 CPFCLEEKPVAARMSRCGHVYCFSCLLRFVET 245


>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
           Brl2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 680

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 507 CVACLEEILQPCVLQ-CGHIFCHQCCYGALKTVVHWC 614
           C  C  E  +  ++  CGH FC+QC    ++T    C
Sbjct: 627 CSVCNFERWKDRIISLCGHGFCYQCIQKRIETRQRRC 663


>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
           Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1958

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 540 KVVIFPPSMQHMSFRYPLHW 481
           K++ +  ++Q +SF +PLHW
Sbjct: 694 KLIEYDIALQPVSFHHPLHW 713


>SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit
           1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 232

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +3

Query: 483 NEVD-NEKTCVACLEEILQPCVLQCGHIFCHQCCYGALKTVVHWCRTPF 626
           NE + N   C AC E ++   V  CG+     CC          C TP+
Sbjct: 175 NEYESNLYECNACREIVIAGYVCDCGYCLHVYCCKHLAHVNCINCNTPW 223


>SPAC13F5.06c |sec10||exocyst complex subunit
           Sec10|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 811

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +3

Query: 81  KLPSYY-ARLASVLLSTFGENLT--RRFVNHVGKKIETNRSLRSEAQDLFLIAVKTLGDV 251
           K+  Y+ A L S+++   G   +  R  VN +   I     +     D+F   V  LGD 
Sbjct: 581 KIMGYFSAYLMSIVIPFTGVTASSRRETVNILSSSISV---IECAVNDVFYATVHALGDH 637

Query: 252 LPQIQSIHRALSY 290
           L  I S +R +SY
Sbjct: 638 LEIILSPYRQISY 650


>SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 513

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 33  LGEEYSGIVQVDDSYHKLPSYYARLASVLLSTFGENLTRRFVNH 164
           +GE  S  ++V +  +KLP Y A++    L T   +L RR+V +
Sbjct: 247 IGEGASSFIRVINDRNKLPIYVAKVFRPPLDT---SLLRRYVRY 287


>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
            Mok11|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2397

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 505  HVLHAWRKYYNLVFFSVAIYSAINVAMAHLKQ 600
            H +H W  +  ++ F VAI+ A+   +A L +
Sbjct: 2214 HNVHKWAMFLLVILFYVAIWIALVALLASLSR 2245


>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
           Brl1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 692

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
 Frame = +3

Query: 552 CGHIFCHQCC---YGALKTVVHWCRTPFT 629
           CGH FC  C    Y    +    C TPF+
Sbjct: 655 CGHAFCSNCMEPFYEHKTSTCPQCETPFS 683


>SPAC343.18 |rfp2||ubiquitin-protein ligase E3
           Rfp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 205

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 9/55 (16%)
 Frame = +3

Query: 495 NEKTCVACLEEILQP-----CVLQCGHIFCHQCCYG-ALKTV---VHWCRTPFTK 632
           N   C  C  E++          +CGH+FC  C      KTV   V  CR   TK
Sbjct: 143 NNIACAKCGNELVSDEKKSIFAAKCGHLFCSTCAKELRKKTVPCPVQHCRKRITK 197


>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 247

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 511 LHAWRKYYNLVFFSVAIYSAINVAMAHLKQ 600
           ++ WRK +++ FFSV     +  A+ HL++
Sbjct: 100 INEWRKLFDINFFSVV--ETVKYAIPHLRK 127


>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 279

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 552 CGHIFCHQCCYGALKTVV 605
           CG +FC+ CC    K  V
Sbjct: 52  CGKLFCYNCCNSFAKLPV 69


>SPAC227.09 |||folylpolyglutamate synthase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 417

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 120 IIRLLNVR-SNLAVCGSYHLLGRFQSTLRLE 31
           I+RL   + S++ VCGS +LLG     L+L+
Sbjct: 386 ILRLAKEKNSSVIVCGSLYLLGDMYRYLKLD 416


>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 270

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 519 SMQHMSFRYPLHWEFLLIGPNVFSLSKHFVRSIQ 418
           ++QH  FRY   W   +  P + SL  + + +++
Sbjct: 177 ALQHCGFRYNDKWAKRVKEPKLMSLMSYIITTVE 210


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,565,228
Number of Sequences: 5004
Number of extensions: 50851
Number of successful extensions: 164
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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