Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1262
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 57 9e-09
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 39 0.003
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 35 0.042
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 35 0.042
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 34 0.097
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 33 0.22
Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical pr... 32 0.30
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 32 0.30
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 32 0.39
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 31 0.52
AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical ... 31 0.52
Z75710-5|CAB54207.1| 240|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.2
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 30 1.2
AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein. 30 1.2
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 30 1.6
U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical pr... 30 1.6
L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein. 30 1.6
AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal embr... 30 1.6
U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 29 2.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 29 2.8
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 29 2.8
AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical ... 29 2.8
AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical ... 29 2.8
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 29 2.8
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr... 29 3.7
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 29 3.7
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 29 3.7
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 29 3.7
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein. 29 3.7
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein. 29 3.7
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 28 6.4
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 28 6.4
AF016449-4|AAG23998.3| 330|Caenorhabditis elegans Serpentine re... 28 6.4
AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical ... 28 6.4
Z82062-4|CAB04888.1| 266|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 27 8.4
AF016677-5|AAB66143.1| 128|Caenorhabditis elegans Hypothetical ... 27 8.4
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 57.2 bits (132), Expect = 9e-09
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 31/215 (14%)
Frame = +3
Query: 27 QTLGEEYSGIVQVDDSYHKLPSYYARLASVLLSTFGENLTRRFV-------------NHV 167
QTLGEEY + + + +PS +R++ VLL + ++ + + +
Sbjct: 67 QTLGEEYVHLFESNGLERTVPSIPSRISFVLLHSAFPLISNYLIQKAESTLTHPSTESFL 126
Query: 168 GKKIETNRSLRSEAQDLFLIAVKTLGDVLPQIQSIHRALSYICGGPLQIGKNLTGIDYVH 347
G I N+ R D+F ++T + PQ+Q H AL YI G I + TGI ++
Sbjct: 127 GIPIRKNQKARQSFLDVFFW-LRT--KLFPQLQRAHIALFYITGAYYSIARRFTGIRFLS 183
Query: 348 VRPAATASYAHL-NLLGYITLLHAFVCCGQSVYL---AKKHLDQLKEIPNE--------V 491
+ + LGYITL+ V G S+Y +K ++LK+ E +
Sbjct: 184 ASAHSDIPALKVYRFLGYITLIQLAVSIGISLYSFLEQEKFNNKLKKEKKENNGGSDRNL 243
Query: 492 DNEK------TCVACLEEILQPCVLQCGHIFCHQC 578
D C CLE P L CGH+FC C
Sbjct: 244 DENSLFHPTFQCSICLEN-KNPSALFCGHLFCWTC 277
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 40.3 bits (90), Expect = 0.001
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 492 DNEKTCVACLEEILQPCVLQCGHIFCHQC 578
D + C CL+ ++PC+++CGH +C C
Sbjct: 3 DEDFCCAVCLDFFVEPCIIECGHSYCRFC 31
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 444 LAKKHLDQLKEIPNEVDNEKTCVACLEEIL----QPCVLQCGHIFCHQCCYGALKTV 602
+ K + ++ I DN ++C C +E Q VLQCGH FC +C G T+
Sbjct: 42 IKKNEMSRIDIIREAADNVQSCRVCYDEYHSSSNQARVLQCGHTFCTRCVVGCSSTM 98
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 498 EKTCVACLEEILQPCVLQCGHIFCHQCCYGAL--KTVVHWCRTPFTK 632
E+ C C ++LQP L+C H+FC C L K+ CR TK
Sbjct: 334 EQPCAVCHGDLLQPIKLECTHVFCKFCIETWLDQKSTCPICRAEVTK 380
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 35.1 bits (77), Expect = 0.042
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 486 EVDNEKTCVACLEEILQPCVLQCGHIFCHQCCYGALKTV 602
+++ TC CL+ QP +L C H FC+ C T+
Sbjct: 36 KIEQLLTCPICLDRYKQPKLLPCQHTFCYPCLESCADTL 74
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 35.1 bits (77), Expect = 0.042
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 486 EVDNEKTCVACLEEILQPCVLQCGHIFCHQCCYGALKTV 602
+++ TC CL+ QP +L C H FC+ C T+
Sbjct: 36 KIEQLLTCPICLDRYKQPKLLPCQHTFCYPCLESCADTL 74
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 33.9 bits (74), Expect = 0.097
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 507 CVACLEEILQPCVLQCGHIFCHQCC 581
C CL+ QP LQCGH C CC
Sbjct: 110 CPHCLQIFEQPISLQCGHSLCLICC 134
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 483 NEVDNEKT-CVACLEEILQPCVLQCGHIFCHQC 578
N++D + C C + I++P L+C H FC +C
Sbjct: 91 NDLDEDDVLCTICYDIIVEPHTLRCQHSFCKKC 123
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 537 PCVLQCGHIFCHQCC--YGALKTVVHWCRTPF 626
P VL CGH +C C +L+ VHW T F
Sbjct: 34 PRVLSCGHTYCEICIQELASLRNNVHWILTSF 65
>Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical
protein F08G12.5 protein.
Length = 185
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 453 KHLDQLKEIPNEVDNEKTCVACLEEILQ--PCVLQCGHIFCHQC 578
K LD+ +V+ + C CL I Q P L CGH FCH+C
Sbjct: 23 KSLDEADVCVVDVETLR-CAVCLN-IFQGIPQTLTCGHSFCHRC 64
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 489 VDNEKTCVACLEEILQPCVLQCGHIFCHQCCYGA 590
++ E C C+ P +L CGH C C A
Sbjct: 1 MEEELKCTICIRFFEDPIILTCGHSLCRMCALKA 34
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 498 EKTCVACLEEILQPCVL-QCGHIFCHQCCYG 587
+K C C E++ P + CGH FC C G
Sbjct: 21 DKECAVCYSEMILPTTIPSCGHKFCFICLKG 51
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 31.5 bits (68), Expect = 0.52
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 507 CVACLEEILQPCVLQCGHIFCHQC 578
C CL P + CGHIFC +C
Sbjct: 105 CPICLANASFPVLTDCGHIFCCEC 128
>AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical
protein Y51A2B.6 protein.
Length = 781
Score = 31.5 bits (68), Expect = 0.52
Identities = 27/111 (24%), Positives = 50/111 (45%)
Frame = +3
Query: 204 EAQDLFLIAVKTLGDVLPQIQSIHRALSYICGGPLQIGKNLTGIDYVHVRPAATASYAHL 383
+ QDLF + V L + + + + R + + P+ + K+L + V+
Sbjct: 452 KVQDLFNVLVD-LSSIENKFKKLKRKVMLL--SPINLDKHL-----IRVKVEGILEELQQ 503
Query: 384 NLLGYITLLHAFVCCGQSVYLAKKHLDQLKEIPNEVDNEKTCVACLEEILQ 536
L Y L F + L KK ++ KE ++VDNE + + CL+++ Q
Sbjct: 504 LTLSYYEKLLPFQPYRKYKKLLKKLINGRKEFADKVDNELSVIKCLQQLKQ 554
>Z75710-5|CAB54207.1| 240|Caenorhabditis elegans Hypothetical
protein D1081.9 protein.
Length = 240
Score = 30.7 bits (66), Expect = 0.91
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 552 CGHIFCHQCCYGALKTVVHWCRTP 623
CGH+FC C A + + C+ P
Sbjct: 23 CGHVFCQNCTKAAFNSQCYLCKKP 46
>Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical
protein F45G2.6 protein.
Length = 462
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 504 TCVACLEEILQPCVLQCGHIFCHQC 578
TC C + + P L C H +C QC
Sbjct: 17 TCPICEQALRDPIKLNCDHHYCRQC 41
>U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical
protein T20F5.7 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = +3
Query: 504 TCVACLEEI----LQPCVLQCGHIFCHQC 578
TC+ C+ E +P VL CGH C +C
Sbjct: 14 TCLICIREFDTKTRKPKVLHCGHTVCEEC 42
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 450 KKHLDQLKEIPNEVDN-EKTCVACLEEILQPCVLQ-CGHIFCHQCCYGAL 593
+ ++ + + E+D E+ C C EI+ L C H FC+ C G L
Sbjct: 21 ESNMTESPQSKEEIDEPEEECSVCKNEIIDTTSLSDCCHEFCYDCIVGWL 70
>AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein.
Length = 462
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 504 TCVACLEEILQPCVLQCGHIFCHQC 578
TC C + + P L C H +C QC
Sbjct: 17 TCPICEQALRDPIKLNCDHHYCRQC 41
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = +3
Query: 495 NEKTCVACLEE----ILQPCVLQCGHIFCHQC 578
N C+ C E + +PC+ CGH C C
Sbjct: 5 NTTECIICYNEYDTELRKPCIGTCGHSICESC 36
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 444 LAKKHLDQLKEIPNEVDNEKTCVACL----EEILQPCVLQCGHIFCHQC 578
L ++ +L E + ++ K C C E P V+ CGH CH C
Sbjct: 169 LIEEQTKKLTESNAKQESRKECPICCWNYDNEDRLPRVMDCGHTMCHTC 217
>U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical
protein F56D2.2 protein.
Length = 451
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +3
Query: 444 LAKKHLDQLKEIPNE--VDNEKTCVACLEEIL-QPCVL--QCGHIFCHQCCYGALKTV 602
L KK L + +E E V+ C C + + Q C+ C H+FC QC + +T+
Sbjct: 163 LKKKILGKGEEAAEEHFVNTLFDCEVCYDSQMGQHCIKFQPCSHVFCKQCTFDYYRTI 220
>L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein.
Length = 627
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +3
Query: 462 DQLKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQC 578
D + + ++ +E C C + +P ++ CGH +C C
Sbjct: 41 DVQQPVRRDLSSELLCPLCDQLFDRPVMVTCGHSYCEPC 79
>AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal
embryonic partitioningof cytoplasm protein 2, isoform a
protein.
Length = 439
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +3
Query: 462 DQLKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQC 578
D + + ++ +E C C + +P ++ CGH +C C
Sbjct: 41 DVQQPVRRDLSSELLCPLCDQLFDRPVMVTCGHSYCEPC 79
>U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical
protein C02B8.6 protein.
Length = 347
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +3
Query: 507 CVACLEEILQPCVLQCGHIFCHQCCYGALKTVV---HWCRTPF 626
C C +P L C H FC+ C G+++ + CR PF
Sbjct: 5 CTICHNTPNRPVRLDCNHEFCYICIKGSIQNDMLNCAVCRRPF 47
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +3
Query: 492 DNEKTCVACLE----EILQPCVLQCGHIFCHQCCY 584
D+ TC C E E P +L CGH FC C +
Sbjct: 19 DSLITCEVCFEVFNHENRPPKLLPCGHNFCESCIF 53
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 504 TCVACLEEILQPCVL--QCGHIFCHQCCYGALKTVVHWCRT 620
+C C +E++Q ++ +CGH FC QC A + C T
Sbjct: 161 SCDVC-QELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPT 200
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 537 PCVLQCGHIFCHQC 578
P VL CGH CH+C
Sbjct: 198 PRVLDCGHTICHEC 211
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 537 PCVLQCGHIFCHQCCYGALKTVVHWCRTPFTK 632
P +LQCGH C C K V C PF +
Sbjct: 150 PRILQCGHSICQSCASKLAKNCVILC--PFCR 179
>AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.8 protein.
Length = 292
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 519 LEEILQPCVLQCGHIFCHQCCYGALKTVVHWC 614
L+E P VL+CGH C C + V C
Sbjct: 16 LDESRAPRVLKCGHSICQNCAVKLISNSVILC 47
>AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical
protein ZK1240.2 protein.
Length = 340
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 519 LEEILQPCVLQCGHIFCHQCCYGALKTVVHWCRTPFTK 632
L ++ P +L+CGH CH C L+ C PF +
Sbjct: 16 LTDVNIPRILRCGHTTCHGCAEKLLRNSTILC--PFCR 51
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = +3
Query: 450 KKHLDQLKEIPNEVDNEKTCVACLEEI-LQPCV--LQCGHIFCHQCCYGALKT 599
K++L K +DN C C + L V L C HIF C LKT
Sbjct: 219 KEYLPMKKVTQEHIDNGAQCTTCFDTFKLDEDVGALDCNHIFHRPCIEPWLKT 271
>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
protein C34B4.1b protein.
Length = 1099
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 438 VYLAKKHLDQLKEIPNEVDNEKTCVACLEEILQPCV 545
++L K+H+ + ++PNE D + + C E L C+
Sbjct: 716 LWLLKRHISRWVDLPNESDETRMAIFC-ESALDRCL 750
>Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical
protein C34B4.1a protein.
Length = 995
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 438 VYLAKKHLDQLKEIPNEVDNEKTCVACLEEILQPCV 545
++L K+H+ + ++PNE D + + C E L C+
Sbjct: 612 LWLLKRHISRWVDLPNESDETRMAIFC-ESALDRCL 646
>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
protein F52E10.1 protein.
Length = 1201
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +3
Query: 360 ATASYAH---LNLLGYITLLHAFVCCGQSVYLAKKHLDQLKEIPNEVDNEKTCVAC 518
A Y H LN+LG + + C G V+L KEI E D+ +C C
Sbjct: 183 AETPYLHRNVLNVLGSLNRASQYYCTGGYVFLPSDWCITNKEIVMEKDHMSSCHLC 238
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
protein protein.
Length = 1203
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +3
Query: 360 ATASYAH---LNLLGYITLLHAFVCCGQSVYLAKKHLDQLKEIPNEVDNEKTCVAC 518
A Y H LN+LG + + C G V+L KEI E D+ +C C
Sbjct: 185 AETPYLHRNVLNVLGSLNRASQYYCTGGYVFLPSDWCITNKEIVMEKDHMSSCHLC 240
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 468 LKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQC 578
L+E ++ TC +C +L+C H+FC C
Sbjct: 769 LEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETC 805
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 468 LKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQC 578
L+E ++ TC +C +L+C H+FC C
Sbjct: 772 LEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETC 808
>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
Length = 1045
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 438 VYLAKKHLDQLKEIPNEVDNEKTCVACLEEILQPCV 545
++L K+H+ + ++PNE D + + C E L C+
Sbjct: 662 LWLLKRHISRWVDLPNESDETRMAIFC-ESALDRCL 696
>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
Length = 1099
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 438 VYLAKKHLDQLKEIPNEVDNEKTCVACLEEILQPCV 545
++L K+H+ + ++PNE D + + C E L C+
Sbjct: 716 LWLLKRHISRWVDLPNESDETRMAIFC-ESALDRCL 750
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = +3
Query: 465 QLKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQC 578
++ E + E C C P + C HIFC C
Sbjct: 7 RITETVARLQKELKCGICCSTYKDPILSTCFHIFCRSC 44
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 507 CVACLEEILQPCVLQCGHIFCHQC 578
C CL+ V CGH+FC C
Sbjct: 26 CNICLDAAKDAVVSLCGHLFCWPC 49
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +3
Query: 477 IPNEVDNEKTCVACLEEI----LQPCVLQCGHIFCHQC 578
+PN VD + C CLE+ +PCV CGH C +C
Sbjct: 2 LPN-VDFSR-CPTCLEDYDDNSHRPCVGFCGHSICLKC 37
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +3
Query: 492 DNEKTCVACLEEILQPCVLQCGHIFCHQCCYGALK---TVVHWCRTPF 626
D+ C+ CL +I +L C H+ C +L+ CR+PF
Sbjct: 264 DSGLECIICLSDIRDTVILPCRHLCVCSNCADSLRYKHNNCPICRSPF 311
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = +3
Query: 444 LAKKHLDQLKEIPNEVDNEKTCVACL----EEILQPCVLQCGHIFCHQC 578
L + +L+ + + + C C E P V++CGH CH C
Sbjct: 155 LTRLKTSRLENEKSSLASRVECTICYLSYDNEARVPRVMKCGHTICHTC 203
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = +3
Query: 444 LAKKHLDQLKEIPNEVDNEKTCVACL----EEILQPCVLQCGHIFCHQC 578
L + +L+ + + + C C E P V++CGH CH C
Sbjct: 155 LTRLKTSRLENEKSSLASRVECTICYLSYDNEARVPRVMKCGHTICHTC 203
>AF016449-4|AAG23998.3| 330|Caenorhabditis elegans Serpentine
receptor, class t protein16 protein.
Length = 330
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 590 CAIATLMAEYMATLKNTRL*YFLQACNTCLFVIH 489
C IA + E+M L + FL C+TC IH
Sbjct: 68 CLIAIIKIEHMTKLPAYKTMLFLGFCDTCATFIH 101
>AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical
protein T08D2.4 protein.
Length = 95
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +3
Query: 453 KHLDQLKEIPNEVDNEKTCVACLEEILQ----PCVLQCGHIFCHQC 578
+++D ++++ + + + TC C+EE P VL CGH FC C
Sbjct: 10 QNVDIIRDV--KFNMKPTCSICMEEFDANSHIPKVLICGHSFCIIC 53
>Z82062-4|CAB04888.1| 266|Caenorhabditis elegans Hypothetical
protein W02A11.8 protein.
Length = 266
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 408 LHAFVCCGQSVYLAKKHLDQLKEIPNEVDNEKTCVACLEEIL 533
LH +V CG + L + L +I + +NEK+C C+++ L
Sbjct: 11 LHVYVYCGNTPELRLQELVADVKITIQPENEKSC--CIKKFL 50
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +3
Query: 450 KKHLDQLKEIPNEVDNEKTCVACLEEI-----LQPCVLQCGHIFCHQC 578
K+ + + ++ VD+E C C E+ P V CGH +C C
Sbjct: 121 KEQIKKRYQLDEYVDDE--CKICFEKYEVTGNRSPRVFNCGHTYCESC 166
>AF016677-5|AAB66143.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1240.6 protein.
Length = 128
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 519 LEEILQPCVLQCGHIFCHQCCYGALKTVVHWCRT 620
++E P VL CGH C C + + C+T
Sbjct: 16 VDESHVPRVLTCGHSICQSCAAKQMSNSLILCKT 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,317,467
Number of Sequences: 27780
Number of extensions: 292081
Number of successful extensions: 908
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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