BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1262 (633 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 25 0.46 Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 25 0.61 AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 24 1.1 DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 3.3 U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 4.3 AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 4.3 AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 4.3 DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 7.5 EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 9.9 >DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein protein. Length = 484 Score = 25.4 bits (53), Expect = 0.46 Identities = 7/19 (36%), Positives = 14/19 (73%) Frame = +2 Query: 530 ITTLCSSVWPYILPSMLLW 586 +T +C + W +I+ ++LLW Sbjct: 388 LTVVCLAFWSFIVSTILLW 406 >Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP57-2 protein. Length = 464 Score = 25.0 bits (52), Expect = 0.61 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 66 DDSYHKLPSYYARLASVLLSTFGENLTRRFVNH 164 DDS+H+L S+ S +S ENLT + V++ Sbjct: 218 DDSFHRLSSHTLNHNSDKMSDQQENLTLKEVDN 250 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 24.2 bits (50), Expect = 1.1 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -1 Query: 270 YFVSVAKHHQESLLQSKRDLGL 205 YF+S A+HH + QS ++G+ Sbjct: 768 YFLSRARHHDDLYSQSYAEVGV 789 >DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. Length = 630 Score = 22.6 bits (46), Expect = 3.3 Identities = 8/22 (36%), Positives = 15/22 (68%) Frame = -1 Query: 528 FPPSMQHMSFRYPLHWEFLLIG 463 FP +QH++ R+ ++ FL +G Sbjct: 392 FPDEVQHLARRFLNNYLFLAVG 413 >U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive opsin protein. Length = 377 Score = 22.2 bits (45), Expect = 4.3 Identities = 5/15 (33%), Positives = 11/15 (73%) Frame = -2 Query: 104 TCVVTWQFVVAIIYL 60 TC+ W +V+ +I++ Sbjct: 222 TCIFIWAYVIPLIFI 236 >AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin protein. Length = 377 Score = 22.2 bits (45), Expect = 4.3 Identities = 5/15 (33%), Positives = 11/15 (73%) Frame = -2 Query: 104 TCVVTWQFVVAIIYL 60 TC+ W +V+ +I++ Sbjct: 222 TCIFIWAYVIPLIFI 236 >AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. Length = 493 Score = 22.2 bits (45), Expect = 4.3 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +1 Query: 514 HAWRKYYNLVFF 549 H WR+ YN+V F Sbjct: 382 HRWRQIYNMVRF 393 >DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. Length = 495 Score = 21.4 bits (43), Expect = 7.5 Identities = 9/29 (31%), Positives = 14/29 (48%) Frame = -3 Query: 256 GKTSPRVFTAIKKRSWASDLSDRFVSIFF 170 G+T R + I+ D+ F SI+F Sbjct: 344 GETKSRFISGIRSEQTIFDVKPEFGSIYF 372 >EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein protein. Length = 1010 Score = 21.0 bits (42), Expect = 9.9 Identities = 7/16 (43%), Positives = 9/16 (56%) Frame = -1 Query: 588 RHSNIDGRIYGHTEEH 541 RH + IYGH + H Sbjct: 795 RHQHAAQMIYGHQQSH 810 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 168,549 Number of Sequences: 438 Number of extensions: 3254 Number of successful extensions: 10 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18949215 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -