Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1261
(664 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g08310.1 68417.m01372 expressed protein glutamic acid-rich pr... 33 0.17
At5g17930.1 68418.m02102 MA3 domain-containing protein low simil... 32 0.39
At4g19230.2 68417.m02837 cytochrome P450 family protein cytochro... 31 0.52
At4g02710.1 68417.m00366 kinase interacting family protein simil... 31 0.90
At3g19900.1 68416.m02520 expressed protein 29 2.1
At5g17240.1 68418.m02020 SET domain-containing protein contains ... 29 2.8
At5g31412.1 68418.m03722 hypothetical protein contains Pfam doma... 29 3.6
At5g38810.1 68418.m04693 F-box family protein predicted proteins... 28 4.8
At1g66130.1 68414.m07505 oxidoreductase N-terminal domain-contai... 28 4.8
At5g64710.2 68418.m08135 expressed protein contains Pfam profile... 28 6.4
At5g64710.1 68418.m08134 expressed protein contains Pfam profile... 28 6.4
At3g04810.2 68416.m00521 protein kinase, putative similar to LST... 28 6.4
At3g04810.1 68416.m00520 protein kinase, putative similar to LST... 28 6.4
At1g57760.1 68414.m06553 expressed protein 28 6.4
At3g20860.1 68416.m02637 protein kinase family protein contains ... 27 8.4
At2g04230.1 68415.m00410 F-box family protein contains F-box dom... 27 8.4
At1g33670.1 68414.m04165 leucine-rich repeat family protein cont... 27 8.4
>At4g08310.1 68417.m01372 expressed protein glutamic acid-rich
protein precursor - Plasmodium falciparum, PIR2:A54514
Length = 504
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +1
Query: 61 DEQKENLKKHRADCLAETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGK 237
D K +K+H CLA + DE N L+T + K + P+K+ A L K KDGK
Sbjct: 77 DVHKSFVKQHLVQCLAGAENDETSENSLET-EKKDDVTPVKEAA--ELSKEHTTKKDGK 132
>At5g17930.1 68418.m02102 MA3 domain-containing protein low
similarity to SP|Q9P6R9 Cell cycle control protein cwf22
{Schizosaccharomyces pombe}; contains Pfam profile
PF02847: MA3 domain
Length = 707
Score = 31.9 bits (69), Expect = 0.39
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +1
Query: 94 ADCLAETKADE--QLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKV 267
A+ +AET E + LK + + N +K C+++ S+ F+K + L +
Sbjct: 479 AEDIAETMDAEVVEAQKMLKLAEAQRMNTDSRKAIFCVIMSSEDYID--AFEKLLRL-DL 535
Query: 268 PNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHEKDPKHAL 399
P +D+ + L++ CL K + T C H+K+ K L
Sbjct: 536 PGKQDREIMRVLVECCLQEKAFNKFYTVLASKLCEHDKNHKFTL 579
>At4g19230.2 68417.m02837 cytochrome P450 family protein cytochrome
P450, Arabidopsis thaliana; supported by cDNA:
gi_15293092_gb_AY050980.1_
Length = 484
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 397 ERASGLSRGSISRNSRLFGEGCCLCWPGKRQS 302
ERA+G S G +SR C LCWPG R+S
Sbjct: 439 ERATGFSMG----HSRFPKTDCPLCWPGSRRS 466
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 478 LDKHVRASYLTLMRYGTVGL-DYVFTRKERASGLSRGSISRNSRLFGEGCCL 326
++K R+ + L+ L DYVFT +E A +S+G+ + L EG CL
Sbjct: 760 IEKLKRSQTIVLLNESIKSLEDYVFTHRESAGEVSKGADLMDEFLKLEGMCL 811
>At3g19900.1 68416.m02520 expressed protein
Length = 222
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 147 LQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHD 4
L F H L + G+T F ++ ++ EG + DN+DDE +SL D
Sbjct: 42 LAFSHSLCLKTTYGKTDRRKFSRICSIVDDEG-NLDNSDDEEKESLDD 88
>At5g17240.1 68418.m02020 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 491
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 178 LKKYALCMLI-KSQLMTKDGKFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAW 354
LKK L + + + LMT + KD+ L+ N + L +++ CL + + ++ W
Sbjct: 57 LKKGELVLKVPRKALMTTESIIAKDLKLSDAVNLHNSLSSTQILSVCLLYEMSKEKKSFW 116
Query: 355 NYVKCYH 375
Y +H
Sbjct: 117 -YPYLFH 122
>At5g31412.1 68418.m03722 hypothetical protein contains Pfam domain,
PF04937: Protein of unknown function (DUF 659)
Length = 433
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 88 HRADCLAETKADEQLVNKLKT-GDFKTENEPLKKYALCMLIKSQLMTKD-GKFKKDVALA 261
H D + E + + K++T GD+K EN L +Y C+L + +D G K + LA
Sbjct: 227 HTVDLMLEAISKLPKMGKMQTFGDYKGENLFLNRYESCVLEWCDVCVEDFGPLMKLLRLA 286
Query: 262 KVPN 273
N
Sbjct: 287 DGEN 290
>At5g38810.1 68418.m04693 F-box family protein predicted proteins,
Arabidopsis thaliana
Length = 259
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +3
Query: 543 LYLFGKF-CFVIITYSIREPKFNFL 614
LY F + CF+++++++R KF FL
Sbjct: 136 LYYFARTSCFLVVSFNVRSEKFKFL 160
>At1g66130.1 68414.m07505 oxidoreductase N-terminal
domain-containing protein similar to AX110P [Daucus
carota] GI:285739; contains Pfam profile PF01408:
Oxidoreductase family NAD-binding Rossmann fold
Length = 364
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 241 KKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAW 354
KK L + P A+D ++EK+++AC N T W
Sbjct: 95 KKKHVLVEKPPAQDATELEKIVEACEYNGVQFMDGTIW 132
>At5g64710.2 68418.m08135 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 716
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 37 VVLAQALTDEQKENLKKHRADCLAETKADEQLVNKLKTGDFKTENEPLKKYALCMLI--- 207
VV + + K+N K + + ++ ++ V +K D K + EP+K L +
Sbjct: 237 VVSVEKMCQNMKQNDKDVKEESHQLQESSQEFVQVMKLMDVKAKEEPVKANQLAITAVDD 296
Query: 208 KSQLMTKDGKFKK 246
S KDG KK
Sbjct: 297 VSSFEEKDGFLKK 309
>At5g64710.1 68418.m08134 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 841
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 37 VVLAQALTDEQKENLKKHRADCLAETKADEQLVNKLKTGDFKTENEPLKKYALCMLI--- 207
VV + + K+N K + + ++ ++ V +K D K + EP+K L +
Sbjct: 362 VVSVEKMCQNMKQNDKDVKEESHQLQESSQEFVQVMKLMDVKAKEEPVKANQLAITAVDD 421
Query: 208 KSQLMTKDGKFKK 246
S KDG KK
Sbjct: 422 VSSFEEKDGFLKK 434
>At3g04810.2 68416.m00521 protein kinase, putative similar to
LSTK-1-like kinase [Lycopersicon esculentum]
GI:15637110; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 578
Score = 27.9 bits (59), Expect = 6.4
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 31 VCVVLAQALTDEQKENLKKHRADCLAETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 210
VC+++ + E +KK E K + LV L ++ N L + C I
Sbjct: 77 VCIIIGYCKGGDMAEAIKKTNGVHFTEEKLCKWLVQILLALEYLHANHILHRDVKCSNI- 135
Query: 211 SQLMTKDGKFK-KDVALAKVPNAED 282
+TKD + D LAKV ++D
Sbjct: 136 --FLTKDQDIRLGDFGLAKVLTSDD 158
>At3g04810.1 68416.m00520 protein kinase, putative similar to
LSTK-1-like kinase [Lycopersicon esculentum]
GI:15637110; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 606
Score = 27.9 bits (59), Expect = 6.4
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 31 VCVVLAQALTDEQKENLKKHRADCLAETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 210
VC+++ + E +KK E K + LV L ++ N L + C I
Sbjct: 77 VCIIIGYCKGGDMAEAIKKTNGVHFTEEKLCKWLVQILLALEYLHANHILHRDVKCSNI- 135
Query: 211 SQLMTKDGKFK-KDVALAKVPNAED 282
+TKD + D LAKV ++D
Sbjct: 136 --FLTKDQDIRLGDFGLAKVLTSDD 158
>At1g57760.1 68414.m06553 expressed protein
Length = 278
Score = 27.9 bits (59), Expect = 6.4
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = -2
Query: 264 FSQSDVLLEFPVLGHQLRFDQHT*SVLLQWFVFSLKVACLQFVHQLFISFRLGETVGSVF 85
F + L F + LR D+ S LL + + + F + S RL E + S F
Sbjct: 131 FMVASSTLRFDLSPLLLRIDRVASSGLLIFAATKFTIKLILFHANIASSSRLLEILSS-F 189
Query: 84 LQVLLLLICEGLSQD 40
+ +LLL+I G+S D
Sbjct: 190 VLILLLMILSGISGD 204
>At3g20860.1 68416.m02637 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 427
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 31 VCVVLAQALTDEQKENLKKHRADCLAETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 210
VC+V + + + +KK R +E K +V L D+ N L + C I
Sbjct: 87 VCIVTSYCEGGDMTQMIKKSRGVFASEEKLCRWMVQLLLAIDYLHNNRVLHRDLKCSNI- 145
Query: 211 SQLMTKDGKFK-KDVALAKVPNAED 282
+TK+ + + D LAK+ +D
Sbjct: 146 --FLTKENEVRLGDFGLAKLLGKDD 168
>At2g04230.1 68415.m00410 F-box family protein contains F-box domain
Pfam:PF00646
Length = 448
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 271 NAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHE 378
++ KL++ KL D L + +P + WN KC E
Sbjct: 333 DSSPKLQILKLTDVYLHDNKTNPDERKWNPPKCAPE 368
>At1g33670.1 68414.m04165 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to receptor kinase-like
protein GB:AAB82755 GI:2586083 from [Oryza
longistaminata] (Science 270 (5243), 1804-1806 (1995))
Length = 455
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2
Query: 273 IRHFSQSDVLLEFPVLGHQLRFD 205
IR F+Q D ++EF G++L+FD
Sbjct: 362 IRFFNQMDFMVEFHAPGNKLQFD 384
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,699,796
Number of Sequences: 28952
Number of extensions: 279570
Number of successful extensions: 778
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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