BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1260 (541 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 25 0.49 AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 3.5 U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 6.1 D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 6.1 AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 6.1 AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 6.1 >L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. Length = 150 Score = 25.0 bits (52), Expect = 0.49 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +2 Query: 425 RDGASGHHEDGRPPTTTSTPRAKTQQLEEKTVAHTL 532 R G HH+D RP T T R K +L + H+L Sbjct: 116 RKGVVFHHDDARPHTYLVT-RQKLLELGWDVLPHSL 150 >AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase protein. Length = 342 Score = 22.2 bits (45), Expect = 3.5 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +2 Query: 425 RDGASGHHEDGRPPTTTSTPRAKTQQLEEKTVAH 526 R G HH++ RP T+ T R K +L + H Sbjct: 237 RKGVVFHHDNARPHTSLVT-RQKLLELGWDVLPH 269 >U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin protein. Length = 377 Score = 21.4 bits (43), Expect = 6.1 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -1 Query: 82 VFTVWMSMFAGRSCVSFSIV 23 +FT+W S+FA + V IV Sbjct: 311 LFTIWGSLFAKANAVYNPIV 330 >D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -2 Query: 144 RFWVRRLFVDFRL 106 RFW+RR F FR+ Sbjct: 210 RFWLRRGFDGFRV 222 >AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -2 Query: 144 RFWVRRLFVDFRL 106 RFW+RR F FR+ Sbjct: 210 RFWLRRGFDGFRV 222 >AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. Length = 554 Score = 21.4 bits (43), Expect = 6.1 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Frame = +2 Query: 365 LLHSH-EQGGKPRAAGGQESVRDGASGHHEDGRPPTTTST 481 LLH Q + G Q GH + GRP TT+T Sbjct: 190 LLHGILSQHPQQHGLGVQNGYGRHLPGHAQMGRPSYTTAT 229 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 125,248 Number of Sequences: 438 Number of extensions: 2350 Number of successful extensions: 10 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15336375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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