Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1259
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   7.3  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   7.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.7  
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         23   9.7  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -3

Query: 584 SNFVWLGTCRRAV-VAKAMTGALGGPRPGGACTTTLLSFPTV 462
           S F   G  R  V VA A+    GGP P G+ + +  S P+V
Sbjct: 743 SAFNSAGDARSGVAVAAALNTGGGGPPPDGSGSGSRCSKPSV 784


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 225 STGLVLPQ*IYIVAPV 178
           STG+VLP+ + I+ PV
Sbjct: 380 STGIVLPKGLNIIVPV 395


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +3

Query: 300 RGRRTVEYLIHFQGWNSSWDRCVSEDFVLKDTEENRQLQRDLAEKSQLQL 449
           + + TV  L      +S W    S   +++  + N+QL   L  +S+L L
Sbjct: 152 KAKTTVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAIALRTESKLML 201


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 285 LRLQEPWNHKAPW 247
           +RL+ PW ++A W
Sbjct: 6   IRLRNPWGNEAEW 18


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,437
Number of Sequences: 2352
Number of extensions: 10564
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)