Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1259
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031210-1|AAH31210.1| 521|Homo sapiens male-specific lethal 3-... 134 2e-31
AF117065-1|AAD38499.1| 521|Homo sapiens male-specific lethal-3 ... 132 7e-31
BC141840-1|AAI41841.1| 323|Homo sapiens mortality factor 4 like... 66 7e-11
BC067826-1|AAH67826.1| 323|Homo sapiens mortality factor 4 like... 66 7e-11
BC022845-1|AAH22845.1| 323|Homo sapiens mortality factor 4 like... 66 7e-11
BC002936-1|AAH02936.1| 323|Homo sapiens mortality factor 4 like... 66 7e-11
AF218011-1|AAG17253.1| 311|Homo sapiens unknown protein. 66 7e-11
AF167173-1|AAF80854.1| 323|Homo sapiens MSL3-1 protein protein. 66 7e-11
AF100615-1|AAD29872.1| 323|Homo sapiens MRG15 protein protein. 66 7e-11
AY148481-1|AAN65338.1| 362|Homo sapiens putative transcription ... 42 2e-07
BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein. 36 0.080
BC017800-1|AAH17800.1| 397|Homo sapiens Unknown (protein for IM... 36 0.080
AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protei... 36 0.080
AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive dom... 36 0.080
AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive dom... 36 0.080
AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive dom... 36 0.080
AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive dom... 36 0.080
AF083249-1|AAD41239.1| 748|Homo sapiens Rb binding protein homo... 36 0.080
AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein ... 36 0.080
S66427-1|AAB28543.1| 1257|Homo sapiens retinoblastoma binding pr... 33 0.75
AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein. 33 0.75
S57162-1|AAB25835.2| 851|Homo sapiens retinoblastoma binding pr... 31 3.0
S57160-1|AAB25834.1| 866|Homo sapiens retinoblastoma binding pr... 31 3.0
S57153-1|AAB25833.1| 920|Homo sapiens retinoblastoma binding pr... 31 3.0
AF227899-1|AAF36964.1| 873|Homo sapiens breast carcinoma-associ... 31 3.0
U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein. 30 7.0
U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein. 30 7.0
M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein. 30 7.0
J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein. 30 7.0
AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I p... 30 7.0
AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I p... 30 7.0
BC062605-1|AAH62605.1| 412|Homo sapiens lysophospholipase 3 (ly... 29 9.2
BC011640-1|AAH11640.2| 277|Homo sapiens LYPLA3 protein protein. 29 9.2
AY358425-1|AAQ88791.1| 412|Homo sapiens LLPL protein. 29 9.2
AL389957-1|CAB97531.1| 192|Homo sapiens LLPL, LCAT-like lysopho... 29 9.2
AL110209-1|CAB53675.1| 272|Homo sapiens hypothetical protein pr... 29 9.2
AK222790-1|BAD96510.1| 412|Homo sapiens lysophospholipase 3 (ly... 29 9.2
AK074828-1|BAC11233.1| 412|Homo sapiens protein ( Homo sapiens ... 29 9.2
AB017494-1|BAA76877.1| 412|Homo sapiens LCAT-like lysophospholi... 29 9.2
>BC031210-1|AAH31210.1| 521|Homo sapiens male-specific lethal
3-like 1 (Drosophila) protein.
Length = 521
Score = 134 bits (324), Expect = 2e-31
Identities = 56/103 (54%), Positives = 82/103 (79%)
Frame = +3
Query: 168 MVSTRGLRYKFTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWN 347
M ++ G+++KF GE+VLC+EPDPTKA+VLYD+K+++V+ KD++GR+ EYLIHF GWN
Sbjct: 1 MSASEGMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWN 60
Query: 348 SSWDRCVSEDFVLKDTEENRQLQRDLAEKSQLQLGAYLYRRER 476
SWDR +ED VL+DT+ENR+LQR LA K+ +L + +++R
Sbjct: 61 RSWDRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKR 103
>AF117065-1|AAD38499.1| 521|Homo sapiens male-specific lethal-3
homolog 1 protein.
Length = 521
Score = 132 bits (320), Expect = 7e-31
Identities = 56/103 (54%), Positives = 81/103 (78%)
Frame = +3
Query: 168 MVSTRGLRYKFTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWN 347
M ++ G+++KF GE+VLC+EPDPTKA+VLYD+K++ V+ KD++GR+ EYLIHF GWN
Sbjct: 1 MSASEGMKFKFHSGEKVLCFEPDPTKARVLYDAKIVVVIVGKDEKGRKIPEYLIHFNGWN 60
Query: 348 SSWDRCVSEDFVLKDTEENRQLQRDLAEKSQLQLGAYLYRRER 476
SWDR +ED VL+DT+ENR+LQR LA K+ +L + +++R
Sbjct: 61 RSWDRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKR 103
>BC141840-1|AAI41841.1| 323|Homo sapiens mortality factor 4 like 1
protein.
Length = 323
Score = 66.5 bits (155), Expect = 7e-11
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 195 KFTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSE 374
KF EGERVLC+ +LY++K ++V KDK+ V+Y IH+ GWN +WD V E
Sbjct: 10 KFQEGERVLCFH-----GPLLYEAKCVKVA-IKDKQ----VKYFIHYSGWNKNWDEWVPE 59
Query: 375 DFVLKDTEENRQLQRDLAEKSQLQ 446
VLK + N Q QR+L + +Q Q
Sbjct: 60 SRVLKYVDTNLQKQRELQKANQEQ 83
>BC067826-1|AAH67826.1| 323|Homo sapiens mortality factor 4 like 1
protein.
Length = 323
Score = 66.5 bits (155), Expect = 7e-11
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 195 KFTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSE 374
KF EGERVLC+ +LY++K ++V KDK+ V+Y IH+ GWN +WD V E
Sbjct: 10 KFQEGERVLCFH-----GPLLYEAKCVKVA-IKDKQ----VKYFIHYSGWNKNWDEWVPE 59
Query: 375 DFVLKDTEENRQLQRDLAEKSQLQ 446
VLK + N Q QR+L + +Q Q
Sbjct: 60 SRVLKYVDTNLQKQRELQKANQEQ 83
>BC022845-1|AAH22845.1| 323|Homo sapiens mortality factor 4 like 1
protein.
Length = 323
Score = 66.5 bits (155), Expect = 7e-11
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 195 KFTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSE 374
KF EGERVLC+ +LY++K ++V KDK+ V+Y IH+ GWN +WD V E
Sbjct: 10 KFQEGERVLCFH-----GPLLYEAKCVKVA-IKDKQ----VKYFIHYSGWNKNWDEWVPE 59
Query: 375 DFVLKDTEENRQLQRDLAEKSQLQ 446
VLK + N Q QR+L + +Q Q
Sbjct: 60 SRVLKYVDTNLQKQRELQKANQEQ 83
>BC002936-1|AAH02936.1| 323|Homo sapiens mortality factor 4 like 1
protein.
Length = 323
Score = 66.5 bits (155), Expect = 7e-11
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 195 KFTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSE 374
KF EGERVLC+ +LY++K ++V KDK+ V+Y IH+ GWN +WD V E
Sbjct: 10 KFQEGERVLCFH-----GPLLYEAKCVKVA-IKDKQ----VKYFIHYSGWNKNWDEWVPE 59
Query: 375 DFVLKDTEENRQLQRDLAEKSQLQ 446
VLK + N Q QR+L + +Q Q
Sbjct: 60 SRVLKYVDTNLQKQRELQKANQEQ 83
>AF218011-1|AAG17253.1| 311|Homo sapiens unknown protein.
Length = 311
Score = 66.5 bits (155), Expect = 7e-11
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 195 KFTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSE 374
KF EGERVLC+ +LY++K ++V KDK+ V+Y IH+ GWN +WD V E
Sbjct: 10 KFQEGERVLCFH-----GPLLYEAKCVKVA-IKDKQ----VKYFIHYSGWNKNWDEWVPE 59
Query: 375 DFVLKDTEENRQLQRDLAEKSQLQ 446
VLK + N Q QR+L + +Q Q
Sbjct: 60 SRVLKYVDTNLQKQRELQKANQEQ 83
>AF167173-1|AAF80854.1| 323|Homo sapiens MSL3-1 protein protein.
Length = 323
Score = 66.5 bits (155), Expect = 7e-11
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 195 KFTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSE 374
KF EGERVLC+ +LY++K ++V KDK+ V+Y IH+ GWN +WD V E
Sbjct: 10 KFQEGERVLCFH-----GPLLYEAKCVKVA-IKDKQ----VKYFIHYSGWNKNWDEWVPE 59
Query: 375 DFVLKDTEENRQLQRDLAEKSQLQ 446
VLK + N Q QR+L + +Q Q
Sbjct: 60 SRVLKYVDTNLQKQRELQKANQEQ 83
>AF100615-1|AAD29872.1| 323|Homo sapiens MRG15 protein protein.
Length = 323
Score = 66.5 bits (155), Expect = 7e-11
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 195 KFTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSE 374
KF EGERVLC+ +LY++K ++V KDK+ V+Y IH+ GWN +WD V E
Sbjct: 10 KFQEGERVLCFH-----GPLLYEAKCVKVA-IKDKQ----VKYFIHYSGWNKNWDEWVPE 59
Query: 375 DFVLKDTEENRQLQRDLAEKSQLQ 446
VLK + N Q QR+L + +Q Q
Sbjct: 60 SRVLKYVDTNLQKQRELQKANQEQ 83
>AY148481-1|AAN65338.1| 362|Homo sapiens putative transcription
factor MRG15-2 protein.
Length = 362
Score = 41.5 bits (93), Expect(2) = 2e-07
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 195 KFTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWN 347
KF EGERVLC+ +LY++K ++V KDK+ V+Y IH+ GWN
Sbjct: 10 KFQEGERVLCFH-----GPLLYEAKCVKVA-IKDKQ----VKYFIHYSGWN 50
Score = 33.1 bits (72), Expect(2) = 2e-07
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 327 IHFQGWNSSWDRCVSEDFVLKDTEENRQLQRDLAEKSQLQ 446
+H SSWD V E VLK + N Q QR+L + +Q Q
Sbjct: 83 VHHPLLTSSWDEWVPESRVLKYVDTNLQKQRELQKANQEQ 122
>BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein.
Length = 1153
Score = 36.3 bits (80), Expect = 0.080
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 204 EGERVLCYEPDPTKAKVLY----DSKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCV 368
E E CY P K +V Y + K+ E ++ D G + YL+H+ GWN +D +
Sbjct: 562 EEEEFECYPPG-MKVQVRYGRGKNQKMYEASIKDSDVEGGEVL-YLVHYCGWNVRYDEWI 619
Query: 369 SEDFVLKDTEEN 404
D +++ ++N
Sbjct: 620 KADKIVRPADKN 631
>BC017800-1|AAH17800.1| 397|Homo sapiens Unknown (protein for
IMAGE:4663973) protein.
Length = 397
Score = 36.3 bits (80), Expect = 0.080
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 204 EGERVLCYEPDPTKAKVLY----DSKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCV 368
E E CY P K +V Y + K+ E ++ D G + YL+H+ GWN +D +
Sbjct: 304 EEEEFECYPPG-MKVQVRYGRGKNQKMYEASIKDSDVEGGEVL-YLVHYCGWNVRYDEWI 361
Query: 369 SEDFVLKDTEEN 404
D +++ ++N
Sbjct: 362 KADKIVRPADKN 373
>AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protein
180 protein.
Length = 1312
Score = 36.3 bits (80), Expect = 0.080
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 204 EGERVLCYEPDPTKAKVLY----DSKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCV 368
E E CY P K +V Y + K+ E ++ D G + YL+H+ GWN +D +
Sbjct: 562 EEEEFECYPPG-MKVQVRYGRGKNQKMYEASIKDSDVEGGEVL-YLVHYCGWNVRYDEWI 619
Query: 369 SEDFVLKDTEEN 404
D +++ ++N
Sbjct: 620 KADKIVRPADKN 631
>AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 36.3 bits (80), Expect = 0.080
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 204 EGERVLCYEPDPTKAKVLY----DSKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCV 368
E E CY P K +V Y + K+ E ++ D G + YL+H+ GWN +D +
Sbjct: 560 EEEEFECYPPG-MKVQVRYGRGKNQKMYEASIKDSDVEGGEVL-YLVHYCGWNVRYDEWI 617
Query: 369 SEDFVLKDTEEN 404
D +++ ++N
Sbjct: 618 KADKIVRPADKN 629
>AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 36.3 bits (80), Expect = 0.080
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 204 EGERVLCYEPDPTKAKVLY----DSKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCV 368
E E CY P K +V Y + K+ E ++ D G + YL+H+ GWN +D +
Sbjct: 367 EEEEFECYPPG-MKVQVRYGRGKNQKMYEASIKDSDVEGGEVL-YLVHYCGWNVRYDEWI 424
Query: 369 SEDFVLKDTEEN 404
D +++ ++N
Sbjct: 425 KADKIVRPADKN 436
>AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 36.3 bits (80), Expect = 0.080
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 204 EGERVLCYEPDPTKAKVLY----DSKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCV 368
E E CY P K +V Y + K+ E ++ D G + YL+H+ GWN +D +
Sbjct: 560 EEEEFECYPPG-MKVQVRYGRGKNQKMYEASIKDSDVEGGEVL-YLVHYCGWNVRYDEWI 617
Query: 369 SEDFVLKDTEEN 404
D +++ ++N
Sbjct: 618 KADKIVRPADKN 629
>AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 36.3 bits (80), Expect = 0.080
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 204 EGERVLCYEPDPTKAKVLY----DSKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCV 368
E E CY P K +V Y + K+ E ++ D G + YL+H+ GWN +D +
Sbjct: 367 EEEEFECYPPG-MKVQVRYGRGKNQKMYEASIKDSDVEGGEVL-YLVHYCGWNVRYDEWI 424
Query: 369 SEDFVLKDTEEN 404
D +++ ++N
Sbjct: 425 KADKIVRPADKN 436
>AF083249-1|AAD41239.1| 748|Homo sapiens Rb binding protein homolog
protein.
Length = 748
Score = 36.3 bits (80), Expect = 0.080
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 204 EGERVLCYEPDPTKAKVLY----DSKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCV 368
E E CY P K +V Y + K+ E ++ D G + YL+H+ GWN +D +
Sbjct: 16 EEEEFECYPPG-MKVQVRYGRGKNQKMYEASIKDSDVEGGEVL-YLVHYCGWNVRYDEWI 73
Query: 369 SEDFVLKDTEEN 404
D +++ ++N
Sbjct: 74 KADKIVRPADKN 85
>AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein
protein.
Length = 1325
Score = 36.3 bits (80), Expect = 0.080
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 204 EGERVLCYEPDPTKAKVLY----DSKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCV 368
E E CY P K +V Y + K+ E ++ D G + YL+H+ GWN +D +
Sbjct: 575 EEEEFECYPPG-MKVQVRYGRGKNQKMYEASIKDSDVEGGEVL-YLVHYCGWNVRYDEWI 632
Query: 369 SEDFVLKDTEEN 404
D +++ ++N
Sbjct: 633 KADKIVRPADKN 644
>S66427-1|AAB28543.1| 1257|Homo sapiens retinoblastoma binding
protein 1 protein.
Length = 1257
Score = 33.1 bits (72), Expect = 0.75
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +3
Query: 240 TKAKVLYD-SKVLEVVESKDKRGR---RTVEYLIHFQGWNSSWDRCVSEDFVL 386
TK KV Y K ++ E+ K V YL+H+ GWN S+D V D ++
Sbjct: 577 TKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVSYDEWVKADRII 629
>AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein.
Length = 803
Score = 33.1 bits (72), Expect = 0.75
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 231 PDPTKAKVLYD----SKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCVSEDFVLKDT 395
P KA+V Y K+ E ++ D G + YL+H+ GWN +D + D +++
Sbjct: 251 PPGMKAQVRYGRGKHQKMYEASIKDSDVEGGEVL-YLVHYCGWNVRYDEWIKADKIVRPA 309
Query: 396 EEN 404
++N
Sbjct: 310 DKN 312
>S57162-1|AAB25835.2| 851|Homo sapiens retinoblastoma binding
protein 1 isoform III protein.
Length = 851
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 240 TKAKVLYD-SKVLEVVESKDKRGR---RTVEYLIHFQGWNSSWDRCVSEDFVL 386
TK KV Y K ++ E+ K V YL+H+ GWN +D V D ++
Sbjct: 240 TKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRII 292
>S57160-1|AAB25834.1| 866|Homo sapiens retinoblastoma binding
protein 1 isoform II protein.
Length = 866
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 240 TKAKVLYD-SKVLEVVESKDKRGR---RTVEYLIHFQGWNSSWDRCVSEDFVL 386
TK KV Y K ++ E+ K V YL+H+ GWN +D V D ++
Sbjct: 240 TKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRII 292
>S57153-1|AAB25833.1| 920|Homo sapiens retinoblastoma binding
protein 1 isoform I protein.
Length = 920
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 240 TKAKVLYD-SKVLEVVESKDKRGR---RTVEYLIHFQGWNSSWDRCVSEDFVL 386
TK KV Y K ++ E+ K V YL+H+ GWN +D V D ++
Sbjct: 240 TKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRII 292
>AF227899-1|AAF36964.1| 873|Homo sapiens breast
carcinoma-associated antigen isoform I protein.
Length = 873
Score = 31.1 bits (67), Expect = 3.0
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 204 EGERVLCYEPDPTKAKVLY----DSKVLEV-VESKDKRGRRTVEYLIHFQGWNSSWDRCV 368
E E CY P K +V Y + K+ E ++ D G + Y +H+ GWN + +
Sbjct: 123 EEEEFECYPPG-MKVQVRYGRGKNQKMYEASIKDSDVEGGEVL-YSVHYCGWNVRYGEWI 180
Query: 369 SEDFVLKDTEEN 404
D +++ ++N
Sbjct: 181 KADKIVRPADKN 192
>U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +3
Query: 183 GLRYKFTEGERVLC---YEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSS 353
G+++KF E + + YEP P K YD KV+++ ++ + L H
Sbjct: 210 GIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEI 269
Query: 354 WDRCVSEDFVLKDTEENRQLQRDLAEKSQLQLGAY 458
+ + +D+ + T E + + +L++ Q+ Y
Sbjct: 270 FRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQY 304
>U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +3
Query: 183 GLRYKFTEGERVLC---YEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSS 353
G+++KF E + + YEP P K YD KV+++ ++ + L H
Sbjct: 210 GIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEI 269
Query: 354 WDRCVSEDFVLKDTEENRQLQRDLAEKSQLQLGAY 458
+ + +D+ + T E + + +L++ Q+ Y
Sbjct: 270 FRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQY 304
>M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein.
Length = 765
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +3
Query: 183 GLRYKFTEGERVLC---YEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSS 353
G+++KF E + + YEP P K YD KV+++ ++ + L H
Sbjct: 214 GIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEI 273
Query: 354 WDRCVSEDFVLKDTEENRQLQRDLAEKSQLQLGAY 458
+ + +D+ + T E + + +L++ Q+ Y
Sbjct: 274 FRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQY 308
>J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein.
Length = 765
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +3
Query: 183 GLRYKFTEGERVLC---YEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSS 353
G+++KF E + + YEP P K YD KV+++ ++ + L H
Sbjct: 214 GIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEI 273
Query: 354 WDRCVSEDFVLKDTEENRQLQRDLAEKSQLQLGAY 458
+ + +D+ + T E + + +L++ Q+ Y
Sbjct: 274 FRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQY 308
>AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +3
Query: 183 GLRYKFTEGERVLC---YEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSS 353
G+++KF E + + YEP P K YD KV+++ ++ + L H
Sbjct: 214 GIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEI 273
Query: 354 WDRCVSEDFVLKDTEENRQLQRDLAEKSQLQLGAY 458
+ + +D+ + T E + + +L++ Q+ Y
Sbjct: 274 FRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQY 308
>AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +3
Query: 183 GLRYKFTEGERVLC---YEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSS 353
G+++KF E + + YEP P K YD KV+++ ++ + L H
Sbjct: 214 GIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEI 273
Query: 354 WDRCVSEDFVLKDTEENRQLQRDLAEKSQLQLGAY 458
+ + +D+ + T E + + +L++ Q+ Y
Sbjct: 274 FRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQY 308
>BC062605-1|AAH62605.1| 412|Homo sapiens lysophospholipase 3
(lysosomal phospholipase A2) protein.
Length = 412
Score = 29.5 bits (63), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 308 TPSFVFALYDFKNLGIIKHLGFSRVWLVAQDSFSLSEFIS*PPCRDHC 165
TP+ + L D++ + +GF WL+ QD+ L E P + HC
Sbjct: 285 TPTINYTLRDYRKF--FQDIGFEDGWLMRQDTEGLVEATMPPGVQLHC 330
>BC011640-1|AAH11640.2| 277|Homo sapiens LYPLA3 protein protein.
Length = 277
Score = 29.5 bits (63), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 308 TPSFVFALYDFKNLGIIKHLGFSRVWLVAQDSFSLSEFIS*PPCRDHC 165
TP+ + L D++ + +GF WL+ QD+ L E P + HC
Sbjct: 150 TPTINYTLRDYRKF--FQDIGFEDGWLMRQDTEGLVEATMPPGVQLHC 195
>AY358425-1|AAQ88791.1| 412|Homo sapiens LLPL protein.
Length = 412
Score = 29.5 bits (63), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 308 TPSFVFALYDFKNLGIIKHLGFSRVWLVAQDSFSLSEFIS*PPCRDHC 165
TP+ + L D++ + +GF WL+ QD+ L E P + HC
Sbjct: 285 TPTINYTLRDYRKF--FQDIGFEDGWLMRQDTEGLVEATMPPGVQLHC 330
>AL389957-1|CAB97531.1| 192|Homo sapiens LLPL, LCAT-like
lysophospholipase protein.
Length = 192
Score = 29.5 bits (63), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 308 TPSFVFALYDFKNLGIIKHLGFSRVWLVAQDSFSLSEFIS*PPCRDHC 165
TP+ + L D++ + +GF WL+ QD+ L E P + HC
Sbjct: 65 TPTINYTLRDYRKF--FQDIGFEDGWLMRQDTEGLVEATMPPGVQLHC 110
>AL110209-1|CAB53675.1| 272|Homo sapiens hypothetical protein
protein.
Length = 272
Score = 29.5 bits (63), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 308 TPSFVFALYDFKNLGIIKHLGFSRVWLVAQDSFSLSEFIS*PPCRDHC 165
TP+ + L D++ + +GF WL+ QD+ L E P + HC
Sbjct: 145 TPTINYTLRDYRKF--FQDIGFEDGWLMRQDTEGLVEATMPPGVQLHC 190
>AK222790-1|BAD96510.1| 412|Homo sapiens lysophospholipase 3
(lysosomal phospholipase A2) variant protein.
Length = 412
Score = 29.5 bits (63), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 308 TPSFVFALYDFKNLGIIKHLGFSRVWLVAQDSFSLSEFIS*PPCRDHC 165
TP+ + L D++ + +GF WL+ QD+ L E P + HC
Sbjct: 285 TPTINYTLRDYRKF--FQDIGFEDGWLMRQDTEGLVEATMPPGVQLHC 330
>AK074828-1|BAC11233.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ90347 fis, clone NT2RP2003042, highly similar to
Lysophospholipase 3 (lysosomal phospholipase A2). ).
Length = 412
Score = 29.5 bits (63), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 308 TPSFVFALYDFKNLGIIKHLGFSRVWLVAQDSFSLSEFIS*PPCRDHC 165
TP+ + L D++ + +GF WL+ QD+ L E P + HC
Sbjct: 285 TPTINYTLRDYRKF--FQDIGFEDGWLMRQDTEGLVEATMPPGVQLHC 330
>AB017494-1|BAA76877.1| 412|Homo sapiens LCAT-like
lysophospholipase (LLPL) protein.
Length = 412
Score = 29.5 bits (63), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 308 TPSFVFALYDFKNLGIIKHLGFSRVWLVAQDSFSLSEFIS*PPCRDHC 165
TP+ + L D++ + +GF WL+ QD+ L E P + HC
Sbjct: 285 TPTINYTLRDYRKF--FQDIGFEDGWLMRQDTEGLVEATMPPGVQLHC 330
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,067,896
Number of Sequences: 237096
Number of extensions: 1679372
Number of successful extensions: 3975
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3967
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -