Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1259
         (589 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81321-1|CAA57101.1|  512|Drosophila melanogaster male specific ...   118   6e-27
AY071074-1|AAL48696.1|  512|Drosophila melanogaster RE14560p pro...   118   6e-27
AE014296-1191|AAF50612.1|  512|Drosophila melanogaster CG8631-PA...   118   6e-27
AE014296-1192|AAN12073.1|  481|Drosophila melanogaster CG8631-PB...    83   3e-16
AY051679-1|AAK93103.1|  424|Drosophila melanogaster LD22902p pro...    57   2e-08
AF152245-1|AAD38047.1|  424|Drosophila melanogaster MRG15 protein.     57   2e-08
AE014297-1988|AAF55161.1|  424|Drosophila melanogaster CG6363-PA...    57   2e-08
AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA...    34   0.16 
AY128416-1|AAM75009.1|  907|Drosophila melanogaster GH06923p pro...    31   1.2  
AE014134-2029|AAF53068.2|  907|Drosophila melanogaster CG6192-PA...    31   1.2  
AY075287-1|AAL68154.2|  336|Drosophila melanogaster AT30562p pro...    29   4.7  

>X81321-1|CAA57101.1|  512|Drosophila melanogaster male specific
           lethal-3 protein.
          Length = 512

 Score =  118 bits (284), Expect = 6e-27
 Identities = 56/91 (61%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
 Frame = +3

Query: 198 FTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSED 377
           F +GE VLCYEPD +KA+VLY SKVL V E +++ G R  EY IHFQGW  S+DRCV   
Sbjct: 11  FHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRCVRAT 70

Query: 378 FVLKDTEENRQLQRDLAEKSQLQL-GAYLYR 467
            +LKDTEENRQLQR+LAE ++LQ+ G Y Y+
Sbjct: 71  VLLKDTEENRQLQRELAEAAKLQIRGDYSYK 101


>AY071074-1|AAL48696.1|  512|Drosophila melanogaster RE14560p
           protein.
          Length = 512

 Score =  118 bits (284), Expect = 6e-27
 Identities = 56/91 (61%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
 Frame = +3

Query: 198 FTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSED 377
           F +GE VLCYEPD +KA+VLY SKVL V E +++ G R  EY IHFQGW  S+DRCV   
Sbjct: 11  FHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRCVRAT 70

Query: 378 FVLKDTEENRQLQRDLAEKSQLQL-GAYLYR 467
            +LKDTEENRQLQR+LAE ++LQ+ G Y Y+
Sbjct: 71  VLLKDTEENRQLQRELAEAAKLQIRGDYSYK 101


>AE014296-1191|AAF50612.1|  512|Drosophila melanogaster CG8631-PA,
           isoform A protein.
          Length = 512

 Score =  118 bits (284), Expect = 6e-27
 Identities = 56/91 (61%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
 Frame = +3

Query: 198 FTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSED 377
           F +GE VLCYEPD +KA+VLY SKVL V E +++ G R  EY IHFQGW  S+DRCV   
Sbjct: 11  FHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRCVRAT 70

Query: 378 FVLKDTEENRQLQRDLAEKSQLQL-GAYLYR 467
            +LKDTEENRQLQR+LAE ++LQ+ G Y Y+
Sbjct: 71  VLLKDTEENRQLQRELAEAAKLQIRGDYSYK 101


>AE014296-1192|AAN12073.1|  481|Drosophila melanogaster CG8631-PB,
           isoform B protein.
          Length = 481

 Score = 83.0 bits (196), Expect = 3e-16
 Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = +3

Query: 267 KVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSEDFVLKDTEENRQLQRDLAEKSQLQ 446
           +VL V E +++ G R  EY IHFQGW  S+DRCV    +LKDTEENRQLQR+LAE ++LQ
Sbjct: 3   QVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRCVRATVLLKDTEENRQLQRELAEAAKLQ 62

Query: 447 L-GAYLYR 467
           + G Y Y+
Sbjct: 63  IRGDYSYK 70


>AY051679-1|AAK93103.1|  424|Drosophila melanogaster LD22902p
           protein.
          Length = 424

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 30/79 (37%), Positives = 47/79 (59%)
 Frame = +3

Query: 198 FTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSED 377
           F +GERVLC+        ++Y++KVL     K K     VEY IH+ GW+ +WD  V E+
Sbjct: 22  FVDGERVLCFH-----GPLIYEAKVL-----KTKPDATPVEYYIHYAGWSKNWDEWVPEN 71

Query: 378 FVLKDTEENRQLQRDLAEK 434
            VLK  ++N + +++LA +
Sbjct: 72  RVLKYNDDNVKRRQELARQ 90


>AF152245-1|AAD38047.1|  424|Drosophila melanogaster MRG15 protein.
          Length = 424

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 30/79 (37%), Positives = 47/79 (59%)
 Frame = +3

Query: 198 FTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSED 377
           F +GERVLC+        ++Y++KVL     K K     VEY IH+ GW+ +WD  V E+
Sbjct: 22  FVDGERVLCFH-----GPLIYEAKVL-----KTKPDATPVEYYIHYAGWSKNWDEWVPEN 71

Query: 378 FVLKDTEENRQLQRDLAEK 434
            VLK  ++N + +++LA +
Sbjct: 72  RVLKYNDDNVKRRQELARQ 90


>AE014297-1988|AAF55161.1|  424|Drosophila melanogaster CG6363-PA
           protein.
          Length = 424

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 30/79 (37%), Positives = 47/79 (59%)
 Frame = +3

Query: 198 FTEGERVLCYEPDPTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSED 377
           F +GERVLC+        ++Y++KVL     K K     VEY IH+ GW+ +WD  V E+
Sbjct: 22  FVDGERVLCFH-----GPLIYEAKVL-----KTKPDATPVEYYIHYAGWSKNWDEWVPEN 71

Query: 378 FVLKDTEENRQLQRDLAEK 434
            VLK  ++N + +++LA +
Sbjct: 72  RVLKYNDDNVKRRQELARQ 90


>AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA
           protein.
          Length = 1868

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +3

Query: 237 PTKAKVLYDSKVLEVVESKDKRGRRTVEYLIHFQGWNSSWDRCVSEDFVLKD-TEENRQL 413
           P+     Y++KV+E+     +RG     YL+H+ GWN+ +D  V  + + ++ T+ ++Q 
Sbjct: 90  PSSHGSTYEAKVIEI---SVQRG--VPMYLVHYTGWNNRYDEWVPRERIAENLTKGSKQK 144

Query: 414 QRDLAEKS 437
            R ++  S
Sbjct: 145 TRTISTSS 152


>AY128416-1|AAM75009.1|  907|Drosophila melanogaster GH06923p
           protein.
          Length = 907

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 493 QAPPGRGPPSAPVMALATTALRQVPSQTKFE 585
           Q+PP + PP AP + L TT   Q+PS   FE
Sbjct: 778 QSPPQQPPPPAPAVGL-TTQTGQLPSAESFE 807


>AE014134-2029|AAF53068.2|  907|Drosophila melanogaster CG6192-PA
           protein.
          Length = 907

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 493 QAPPGRGPPSAPVMALATTALRQVPSQTKFE 585
           Q+PP + PP AP + L TT   Q+PS   FE
Sbjct: 778 QSPPQQPPPPAPAVGL-TTQTGQLPSAESFE 807


>AY075287-1|AAL68154.2|  336|Drosophila melanogaster AT30562p
           protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +3

Query: 99  PSHLLNGVILLSSHRFWARHQLTMVSTRGLRYKFTEGERVL 221
           P     G +  SSH  WAR Q      +  +YK  E E+VL
Sbjct: 168 PQRRAEGAVKHSSHSSWARGQQIQPPNQYQQYKQPEAEQVL 208


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,505,649
Number of Sequences: 53049
Number of extensions: 504848
Number of successful extensions: 1444
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)