BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1258 (620 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY060661-1|AAL28209.1| 481|Drosophila melanogaster GH08719p pro... 282 2e-76 AE014297-2289|AAF55375.1| 481|Drosophila melanogaster CG3590-PA... 282 2e-76 AY051871-1|AAK93295.1| 551|Drosophila melanogaster LD36546p pro... 31 1.7 AE014297-2120|AAN13687.1| 535|Drosophila melanogaster CG8884-PG... 31 1.7 AE014297-2119|AAN13686.1| 551|Drosophila melanogaster CG8884-PH... 31 1.7 AE014297-2118|AAN13685.1| 551|Drosophila melanogaster CG8884-PE... 31 1.7 AE014297-2117|AAN13684.1| 551|Drosophila melanogaster CG8884-PD... 31 1.7 AE014297-2116|AAN13683.1| 551|Drosophila melanogaster CG8884-PC... 31 1.7 AE014297-2115|AAN13682.1| 551|Drosophila melanogaster CG8884-PA... 31 1.7 DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr... 29 5.1 DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p... 29 5.1 AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB... 29 5.1 AY069413-1|AAL39558.1| 420|Drosophila melanogaster LD11027p pro... 29 6.7 AE014134-543|AAN10406.1| 420|Drosophila melanogaster CG17257-PB... 29 6.7 AE014134-542|AAF51157.2| 420|Drosophila melanogaster CG17257-PA... 29 6.7 >AY060661-1|AAL28209.1| 481|Drosophila melanogaster GH08719p protein. Length = 481 Score = 282 bits (692), Expect = 2e-76 Identities = 130/188 (69%), Positives = 154/188 (81%) Frame = +3 Query: 57 TEYCNYRSPLSTRYASKEMQYNFSDQKKFSTWRKLWIYLAKAEKELGLDISAAQIAELEA 236 + Y Y+SPLSTRYASKEMQ+ FSDQ KFSTWR+LW++LAKAE LGL+IS AQIAE+E Sbjct: 3 SNYEGYKSPLSTRYASKEMQFLFSDQNKFSTWRRLWVWLAKAESRLGLEISDAQIAEMEL 62 Query: 237 AVHDIDFPAAAEHEKRVRHDVMAHVHTLGERCPLAAPIIHLGATSCYVGDNTDLIVLKNG 416 + +IDF AAA E+ RHDVMAHVH ++CP AAP+IHLGATSCYVGDNTDLIVL++ Sbjct: 63 QISNIDFEAAAAEERLTRHDVMAHVHVFAKQCPSAAPVIHLGATSCYVGDNTDLIVLRDA 122 Query: 417 LELLLPRLVAVIKQLGSFAKQYKSLPILGFTHLQPAQLTTVGKRASLWLNDLLMDERALS 596 L+LLLPR+ +VI +L FA+ YK P LGFTHLQPAQLTTVGKRA LW+ DL+MDERALS Sbjct: 123 LKLLLPRVASVIARLSQFAQSYKDQPTLGFTHLQPAQLTTVGKRACLWIQDLIMDERALS 182 Query: 597 RAKDDLGF 620 R +DL F Sbjct: 183 RCLEDLRF 190 >AE014297-2289|AAF55375.1| 481|Drosophila melanogaster CG3590-PA protein. Length = 481 Score = 282 bits (692), Expect = 2e-76 Identities = 130/188 (69%), Positives = 154/188 (81%) Frame = +3 Query: 57 TEYCNYRSPLSTRYASKEMQYNFSDQKKFSTWRKLWIYLAKAEKELGLDISAAQIAELEA 236 + Y Y+SPLSTRYASKEMQ+ FSDQ KFSTWR+LW++LAKAE LGL+IS AQIAE+E Sbjct: 3 SNYEGYKSPLSTRYASKEMQFLFSDQNKFSTWRRLWVWLAKAESRLGLEISDAQIAEMEL 62 Query: 237 AVHDIDFPAAAEHEKRVRHDVMAHVHTLGERCPLAAPIIHLGATSCYVGDNTDLIVLKNG 416 + +IDF AAA E+ RHDVMAHVH ++CP AAP+IHLGATSCYVGDNTDLIVL++ Sbjct: 63 QISNIDFEAAAAEERLTRHDVMAHVHVFAKQCPSAAPVIHLGATSCYVGDNTDLIVLRDA 122 Query: 417 LELLLPRLVAVIKQLGSFAKQYKSLPILGFTHLQPAQLTTVGKRASLWLNDLLMDERALS 596 L+LLLPR+ +VI +L FA+ YK P LGFTHLQPAQLTTVGKRA LW+ DL+MDERALS Sbjct: 123 LKLLLPRVASVIARLSQFAQSYKDQPTLGFTHLQPAQLTTVGKRACLWIQDLIMDERALS 182 Query: 597 RAKDDLGF 620 R +DL F Sbjct: 183 RCLEDLRF 190 >AY051871-1|AAK93295.1| 551|Drosophila melanogaster LD36546p protein. Length = 551 Score = 30.7 bits (66), Expect = 1.7 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -1 Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339 + E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506 Query: 338 EGTPLAE 318 +G E Sbjct: 507 KGRKAGE 513 >AE014297-2120|AAN13687.1| 535|Drosophila melanogaster CG8884-PG, isoform G protein. Length = 535 Score = 30.7 bits (66), Expect = 1.7 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -1 Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339 + E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR Sbjct: 434 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 490 Query: 338 EGTPLAE 318 +G E Sbjct: 491 KGRKAGE 497 >AE014297-2119|AAN13686.1| 551|Drosophila melanogaster CG8884-PH, isoform H protein. Length = 551 Score = 30.7 bits (66), Expect = 1.7 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -1 Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339 + E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506 Query: 338 EGTPLAE 318 +G E Sbjct: 507 KGRKAGE 513 >AE014297-2118|AAN13685.1| 551|Drosophila melanogaster CG8884-PE, isoform E protein. Length = 551 Score = 30.7 bits (66), Expect = 1.7 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -1 Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339 + E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506 Query: 338 EGTPLAE 318 +G E Sbjct: 507 KGRKAGE 513 >AE014297-2117|AAN13684.1| 551|Drosophila melanogaster CG8884-PD, isoform D protein. Length = 551 Score = 30.7 bits (66), Expect = 1.7 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -1 Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339 + E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506 Query: 338 EGTPLAE 318 +G E Sbjct: 507 KGRKAGE 513 >AE014297-2116|AAN13683.1| 551|Drosophila melanogaster CG8884-PC, isoform C protein. Length = 551 Score = 30.7 bits (66), Expect = 1.7 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -1 Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339 + E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506 Query: 338 EGTPLAE 318 +G E Sbjct: 507 KGRKAGE 513 >AE014297-2115|AAN13682.1| 551|Drosophila melanogaster CG8884-PA, isoform A protein. Length = 551 Score = 30.7 bits (66), Expect = 1.7 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -1 Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339 + E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506 Query: 338 EGTPLAE 318 +G E Sbjct: 507 KGRKAGE 513 >DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut protein. Length = 2176 Score = 29.1 bits (62), Expect = 5.1 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +1 Query: 313 TRSARGVPSPRPSYTWEPPRATSETT 390 T + R VP PRP++ EPP ETT Sbjct: 696 TTTPRVVPVPRPTFAPEPPLDVVETT 721 >DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker protein. Length = 2165 Score = 29.1 bits (62), Expect = 5.1 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +1 Query: 313 TRSARGVPSPRPSYTWEPPRATSETT 390 T + R VP PRP++ EPP ETT Sbjct: 685 TTTPRVVPVPRPTFAPEPPLDVVETT 710 >AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB protein. Length = 1984 Score = 29.1 bits (62), Expect = 5.1 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +1 Query: 313 TRSARGVPSPRPSYTWEPPRATSETT 390 T + R VP PRP++ EPP ETT Sbjct: 489 TTTPRVVPVPRPTFAPEPPLDVVETT 514 >AY069413-1|AAL39558.1| 420|Drosophila melanogaster LD11027p protein. Length = 420 Score = 28.7 bits (61), Expect = 6.7 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 323 REVSPRRAHHTPGSHLVLRRRQH 391 R+V+PRRA+H P ++RR H Sbjct: 272 RKVTPRRAYHCPVCGTCVKRRDH 294 >AE014134-543|AAN10406.1| 420|Drosophila melanogaster CG17257-PB, isoform B protein. Length = 420 Score = 28.7 bits (61), Expect = 6.7 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 323 REVSPRRAHHTPGSHLVLRRRQH 391 R+V+PRRA+H P ++RR H Sbjct: 272 RKVTPRRAYHCPVCGTCVKRRDH 294 >AE014134-542|AAF51157.2| 420|Drosophila melanogaster CG17257-PA, isoform A protein. Length = 420 Score = 28.7 bits (61), Expect = 6.7 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 323 REVSPRRAHHTPGSHLVLRRRQH 391 R+V+PRRA+H P ++RR H Sbjct: 272 RKVTPRRAYHCPVCGTCVKRRDH 294 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 27,712,289 Number of Sequences: 53049 Number of extensions: 577918 Number of successful extensions: 1963 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1851 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1963 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2559155400 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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