Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1258
(620 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060661-1|AAL28209.1| 481|Drosophila melanogaster GH08719p pro... 282 2e-76
AE014297-2289|AAF55375.1| 481|Drosophila melanogaster CG3590-PA... 282 2e-76
AY051871-1|AAK93295.1| 551|Drosophila melanogaster LD36546p pro... 31 1.7
AE014297-2120|AAN13687.1| 535|Drosophila melanogaster CG8884-PG... 31 1.7
AE014297-2119|AAN13686.1| 551|Drosophila melanogaster CG8884-PH... 31 1.7
AE014297-2118|AAN13685.1| 551|Drosophila melanogaster CG8884-PE... 31 1.7
AE014297-2117|AAN13684.1| 551|Drosophila melanogaster CG8884-PD... 31 1.7
AE014297-2116|AAN13683.1| 551|Drosophila melanogaster CG8884-PC... 31 1.7
AE014297-2115|AAN13682.1| 551|Drosophila melanogaster CG8884-PA... 31 1.7
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr... 29 5.1
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p... 29 5.1
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB... 29 5.1
AY069413-1|AAL39558.1| 420|Drosophila melanogaster LD11027p pro... 29 6.7
AE014134-543|AAN10406.1| 420|Drosophila melanogaster CG17257-PB... 29 6.7
AE014134-542|AAF51157.2| 420|Drosophila melanogaster CG17257-PA... 29 6.7
>AY060661-1|AAL28209.1| 481|Drosophila melanogaster GH08719p
protein.
Length = 481
Score = 282 bits (692), Expect = 2e-76
Identities = 130/188 (69%), Positives = 154/188 (81%)
Frame = +3
Query: 57 TEYCNYRSPLSTRYASKEMQYNFSDQKKFSTWRKLWIYLAKAEKELGLDISAAQIAELEA 236
+ Y Y+SPLSTRYASKEMQ+ FSDQ KFSTWR+LW++LAKAE LGL+IS AQIAE+E
Sbjct: 3 SNYEGYKSPLSTRYASKEMQFLFSDQNKFSTWRRLWVWLAKAESRLGLEISDAQIAEMEL 62
Query: 237 AVHDIDFPAAAEHEKRVRHDVMAHVHTLGERCPLAAPIIHLGATSCYVGDNTDLIVLKNG 416
+ +IDF AAA E+ RHDVMAHVH ++CP AAP+IHLGATSCYVGDNTDLIVL++
Sbjct: 63 QISNIDFEAAAAEERLTRHDVMAHVHVFAKQCPSAAPVIHLGATSCYVGDNTDLIVLRDA 122
Query: 417 LELLLPRLVAVIKQLGSFAKQYKSLPILGFTHLQPAQLTTVGKRASLWLNDLLMDERALS 596
L+LLLPR+ +VI +L FA+ YK P LGFTHLQPAQLTTVGKRA LW+ DL+MDERALS
Sbjct: 123 LKLLLPRVASVIARLSQFAQSYKDQPTLGFTHLQPAQLTTVGKRACLWIQDLIMDERALS 182
Query: 597 RAKDDLGF 620
R +DL F
Sbjct: 183 RCLEDLRF 190
>AE014297-2289|AAF55375.1| 481|Drosophila melanogaster CG3590-PA
protein.
Length = 481
Score = 282 bits (692), Expect = 2e-76
Identities = 130/188 (69%), Positives = 154/188 (81%)
Frame = +3
Query: 57 TEYCNYRSPLSTRYASKEMQYNFSDQKKFSTWRKLWIYLAKAEKELGLDISAAQIAELEA 236
+ Y Y+SPLSTRYASKEMQ+ FSDQ KFSTWR+LW++LAKAE LGL+IS AQIAE+E
Sbjct: 3 SNYEGYKSPLSTRYASKEMQFLFSDQNKFSTWRRLWVWLAKAESRLGLEISDAQIAEMEL 62
Query: 237 AVHDIDFPAAAEHEKRVRHDVMAHVHTLGERCPLAAPIIHLGATSCYVGDNTDLIVLKNG 416
+ +IDF AAA E+ RHDVMAHVH ++CP AAP+IHLGATSCYVGDNTDLIVL++
Sbjct: 63 QISNIDFEAAAAEERLTRHDVMAHVHVFAKQCPSAAPVIHLGATSCYVGDNTDLIVLRDA 122
Query: 417 LELLLPRLVAVIKQLGSFAKQYKSLPILGFTHLQPAQLTTVGKRASLWLNDLLMDERALS 596
L+LLLPR+ +VI +L FA+ YK P LGFTHLQPAQLTTVGKRA LW+ DL+MDERALS
Sbjct: 123 LKLLLPRVASVIARLSQFAQSYKDQPTLGFTHLQPAQLTTVGKRACLWIQDLIMDERALS 182
Query: 597 RAKDDLGF 620
R +DL F
Sbjct: 183 RCLEDLRF 190
>AY051871-1|AAK93295.1| 551|Drosophila melanogaster LD36546p
protein.
Length = 551
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -1
Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339
+ E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR
Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506
Query: 338 EGTPLAE 318
+G E
Sbjct: 507 KGRKAGE 513
>AE014297-2120|AAN13687.1| 535|Drosophila melanogaster CG8884-PG,
isoform G protein.
Length = 535
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -1
Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339
+ E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR
Sbjct: 434 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 490
Query: 338 EGTPLAE 318
+G E
Sbjct: 491 KGRKAGE 497
>AE014297-2119|AAN13686.1| 551|Drosophila melanogaster CG8884-PH,
isoform H protein.
Length = 551
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -1
Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339
+ E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR
Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506
Query: 338 EGTPLAE 318
+G E
Sbjct: 507 KGRKAGE 513
>AE014297-2118|AAN13685.1| 551|Drosophila melanogaster CG8884-PE,
isoform E protein.
Length = 551
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -1
Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339
+ E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR
Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506
Query: 338 EGTPLAE 318
+G E
Sbjct: 507 KGRKAGE 513
>AE014297-2117|AAN13684.1| 551|Drosophila melanogaster CG8884-PD,
isoform D protein.
Length = 551
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -1
Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339
+ E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR
Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506
Query: 338 EGTPLAE 318
+G E
Sbjct: 507 KGRKAGE 513
>AE014297-2116|AAN13683.1| 551|Drosophila melanogaster CG8884-PC,
isoform C protein.
Length = 551
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -1
Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339
+ E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR
Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506
Query: 338 EGTPLAE 318
+G E
Sbjct: 507 KGRKAGE 513
>AE014297-2115|AAN13682.1| 551|Drosophila melanogaster CG8884-PA,
isoform A protein.
Length = 551
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -1
Query: 512 MGEAEDGQRLVLFREASK--LFDDGDEPWQKQLESVLKDYQIGVVSDVARGGSQVYDGRG 339
+ E +DG R + ++ L +E W+K LE+ LKDY+ VV + GG GR
Sbjct: 450 LAEIQDGMRKLGIDSMTQQALAATDEEQWEKDLEAELKDYE--VVDEGGTGGDG-GGGRR 506
Query: 338 EGTPLAE 318
+G E
Sbjct: 507 KGRKAGE 513
>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
protein.
Length = 2176
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 313 TRSARGVPSPRPSYTWEPPRATSETT 390
T + R VP PRP++ EPP ETT
Sbjct: 696 TTTPRVVPVPRPTFAPEPPLDVVETT 721
>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
protein.
Length = 2165
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 313 TRSARGVPSPRPSYTWEPPRATSETT 390
T + R VP PRP++ EPP ETT
Sbjct: 685 TTTPRVVPVPRPTFAPEPPLDVVETT 710
>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
protein.
Length = 1984
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 313 TRSARGVPSPRPSYTWEPPRATSETT 390
T + R VP PRP++ EPP ETT
Sbjct: 489 TTTPRVVPVPRPTFAPEPPLDVVETT 514
>AY069413-1|AAL39558.1| 420|Drosophila melanogaster LD11027p
protein.
Length = 420
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 323 REVSPRRAHHTPGSHLVLRRRQH 391
R+V+PRRA+H P ++RR H
Sbjct: 272 RKVTPRRAYHCPVCGTCVKRRDH 294
>AE014134-543|AAN10406.1| 420|Drosophila melanogaster CG17257-PB,
isoform B protein.
Length = 420
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 323 REVSPRRAHHTPGSHLVLRRRQH 391
R+V+PRRA+H P ++RR H
Sbjct: 272 RKVTPRRAYHCPVCGTCVKRRDH 294
>AE014134-542|AAF51157.2| 420|Drosophila melanogaster CG17257-PA,
isoform A protein.
Length = 420
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 323 REVSPRRAHHTPGSHLVLRRRQH 391
R+V+PRRA+H P ++RR H
Sbjct: 272 RKVTPRRAYHCPVCGTCVKRRDH 294
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,712,289
Number of Sequences: 53049
Number of extensions: 577918
Number of successful extensions: 1963
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1963
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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