Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1256
         (626 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   2.0  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    23   6.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   6.0  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   7.9  
AJ438610-8|CAD27480.1|   82|Anopheles gambiae hypothetical prote...    23   7.9  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         23   7.9  

>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +2

Query: 128 FPNESEKNGKCSSAEYKLEGDVVKVKN 208
           + ++ E++   ++AE+ L+ DV++V N
Sbjct: 170 YDDDDEEDAAAAAAEFPLQKDVIRVTN 196


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 101 GKLSS*SCSPVSARGRCLRE*LQQSPPQA 15
           GKLS  + S +S   +C+ E L++ PP A
Sbjct: 346 GKLSYEAVSEMSYLEQCISETLRKHPPVA 374


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 175  QTGR*RGEGQERAYHRRRQEVYRRDGQAHRRCQ*SRKANSHF 300
            Q GR     +E    RRR+E+ R   Q  RR + S+    HF
Sbjct: 1178 QNGRAVSSAEE--LERRRREMERTRRQRQRRARDSQAITIHF 1217


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -2

Query: 616 LQVSFQS*CFPCSVITLELVNLQASSEKIGMHKFRRV 506
           L V   S CF C V+      LQ +S K G  K   +
Sbjct: 173 LDVKLLSQCFTCDVVGSCAFGLQCNSLKNGGSKLLEI 209


>AJ438610-8|CAD27480.1|   82|Anopheles gambiae hypothetical protein
           protein.
          Length = 82

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 555 ICRLPLKKSVCTSFEESISLECSLMKLSTAVLASPSSFLFLER 427
           +  +P+K S C +   S +   SL + S   +A+ +S  +L R
Sbjct: 31  VIEIPIKSSACGTSSSSSTGGDSLNRWSQTQMAAQASSRYLTR 73


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 290 TVTFKFGEISRDGSVQILATDYNNYAIAYNCKYDD 394
           T+TFK G+         LATDY    +  +  + D
Sbjct: 53  TLTFKDGQTYTQAIAFTLATDYGTVRLMSSYNFTD 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,465
Number of Sequences: 2352
Number of extensions: 10433
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)